RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 SLF2Q8IX21 1173 aa16.65■□□□□ 0.26
CAPNS1-213ENST00000592354 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
CAPNS1-213ENST00000592354 SPATA5Q8NB90 893 aa16.65■□□□□ 0.26
CAPNS1-213ENST00000592354 ARHGAP39Q9C0H5 1083 aa16.65■□□□□ 0.26
CAPNS1-213ENST00000592354 PTCH2Q9Y6C5 1203 aa16.65■□□□□ 0.26
CAPNS1-213ENST00000592354 BRCA2P51587 3418 aa16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 POTEFA5A3E0 1075 aa16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 DDTLA6NHG4 134 aaPredicted RBP16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 TLR2O60603 784 aa16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 ARID4AP29374 1257 aaPredicted RBP16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 MCAMP43121 646 aa16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 NOL9Q5SY16 702 aaKnown RBP16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 ITPRIPQ8IWB1 547 aa16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 ZCCHC17Q9NP64 241 aaKnown RBP16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 PDE4DIPQ5VU43 2346 aa16.64■□□□□ 0.25
CAPNS1-213ENST00000592354 SIPA1L1O43166 1804 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 FOCADQ5VW36 1801 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 PHF20L1A8MW92 1017 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 PDHXO00330 501 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 RLBP1P12271 317 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 RHBDL3P58872 404 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 LACTBP83111 547 aaPredicted RBP16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 OS9Q13438 667 aaPredicted RBP16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 RAI14Q9P0K7 980 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 CPA4Q9UI42 421 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 KCNH4Q9UQ05 1017 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 MGAMO43451 1857 aa16.63■□□□□ 0.25
CAPNS1-213ENST00000592354 FAM196BA6NMK8 535 aa16.62■□□□□ 0.25
CAPNS1-213ENST00000592354 POLA2Q14181 598 aa16.62■□□□□ 0.25
CAPNS1-213ENST00000592354 ANKRD23Q86SG2 305 aa16.62■□□□□ 0.25
CAPNS1-213ENST00000592354 SCYL3Q8IZE3 742 aa16.62■□□□□ 0.25
CAPNS1-213ENST00000592354 NSUN4Q96CB9 384 aaKnown RBP16.62■□□□□ 0.25
CAPNS1-213ENST00000592354 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
CAPNS1-213ENST00000592354 DBNDD2Q9BQY9 259 aa16.62■□□□□ 0.25
CAPNS1-213ENST00000592354 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
CAPNS1-213ENST00000592354 SNRKQ9NRH2 765 aa16.62■□□□□ 0.25
CAPNS1-213ENST00000592354 GPR75-ASB3A0A0A6YYF3 556 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 MYCP01106 439 aaPredicted RBP16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 UQCRFS1P1P0C7P4 283 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 MOGSQ13724 837 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 KIF22Q14807 665 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 SLC9C1Q4G0N8 1177 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 TNNI3KQ59H18 835 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 CCDC84Q86UT8 332 aaPredicted RBP16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 ARMC5Q96C12 935 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 FPGT-TNNI3KV9GXZ4 949 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 ADGRA2Q96PE1 1338 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
CAPNS1-213ENST00000592354 GSTO1P78417 241 aa16.6■□□□□ 0.25
CAPNS1-213ENST00000592354 ARHGEF6Q15052 776 aa16.6■□□□□ 0.25
CAPNS1-213ENST00000592354 TTC39AQ5SRH9 613 aa16.6■□□□□ 0.25
CAPNS1-213ENST00000592354 SSH3Q8TE77 659 aa16.6■□□□□ 0.25
CAPNS1-213ENST00000592354 LRP2BPQ9P2M1 347 aa16.6■□□□□ 0.25
CAPNS1-213ENST00000592354 ZHX2Q9Y6X8 837 aa16.6■□□□□ 0.25
CAPNS1-213ENST00000592354 SURF6O75683 361 aaKnown RBP16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 CYP2C8P10632 490 aa16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 PTPRAP18433 802 aa16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 CTGFP29279 349 aa16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 PRPF38BQ5VTL8 546 aaKnown RBP16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 C17orf99Q6UX52 265 aa16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 GADL1Q6ZQY3 521 aa16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 SH3TC2Q8TF17 1288 aa16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 ZNF333Q96JL9 665 aa16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 TLR7Q9NYK1 1049 aaKnown RBP16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 ZBED9Q6R2W3 1325 aa16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 COL2A1P02458 1487 aaPredicted RBP16.59■□□□□ 0.25
CAPNS1-213ENST00000592354 LDHCP07864 332 aa16.58■□□□□ 0.24
CAPNS1-213ENST00000592354 EN2P19622 333 aaPredicted RBP16.58■□□□□ 0.24
CAPNS1-213ENST00000592354 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
CAPNS1-213ENST00000592354 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
CAPNS1-213ENST00000592354 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
CAPNS1-213ENST00000592354 PARK7Q99497 189 aaKnown RBP16.58■□□□□ 0.24
CAPNS1-213ENST00000592354 A0A0G2JLL6 359 aaPredicted RBP16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 TRIM75PA6NK02 468 aa16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 CXCL11O14625 94 aa16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 ZBTB7BO15156 539 aaPredicted RBP16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 SLC34A2O95436 690 aa16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 CCDC158Q5M9N0 1113 aa16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 PRRT2Q7Z6L0 340 aaPredicted RBP16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 TRIM47Q96LD4 638 aa16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 OSBPL5Q9H0X9 879 aaPredicted RBP16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 GPR108Q9NPR9 543 aa16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 AATFQ9NY61 560 aaKnown RBP eCLIP16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 DBNLQ9UJU6 430 aaKnown RBP16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 AFG3L2Q9Y4W6 797 aa16.57■□□□□ 0.24
CAPNS1-213ENST00000592354 CTNND1O60716 968 aaKnown RBP16.56■□□□□ 0.24
CAPNS1-213ENST00000592354 PSMC4P43686 418 aa16.56■□□□□ 0.24
CAPNS1-213ENST00000592354 MAP3K10Q02779 954 aa16.56■□□□□ 0.24
CAPNS1-213ENST00000592354 NAA16Q6N069 864 aaPredicted RBP16.56■□□□□ 0.24
CAPNS1-213ENST00000592354 ADGRA1Q86SQ6 560 aa16.56■□□□□ 0.24
CAPNS1-213ENST00000592354 PANK1Q8TE04 598 aa16.56■□□□□ 0.24
CAPNS1-213ENST00000592354 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
CAPNS1-213ENST00000592354 TMEM106CQ9BVX2 250 aa16.56■□□□□ 0.24
CAPNS1-213ENST00000592354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.56■□□□□ 0.24
CAPNS1-213ENST00000592354 MKI67P46013 3256 aaKnown RBP16.55■□□□□ 0.24
CAPNS1-213ENST00000592354 CYP2E1P05181 493 aaPredicted RBP16.55■□□□□ 0.24
CAPNS1-213ENST00000592354 ZAP70P43403 619 aa16.55■□□□□ 0.24
CAPNS1-213ENST00000592354 SLC4A8Q2Y0W8 1093 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms