RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SLC39A14Q15043 492 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 RRP12Q5JTH9 1297 aaKnown RBP22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 TRIM22Q8IYM9 498 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 ZNF830Q96NB3 372 aaPredicted RBP22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 INCENPQ9NQS7 918 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 FAM217BQ9NTX9 383 aaPredicted RBP22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 CMA1P23946 247 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 ZNF75DP51815 510 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 PPARAQ07869 468 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 PHKBQ93100 1093 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 ANKRD2Q9GZV1 360 aa22.22■■□□□ 1.15
PRKCSH-209ENST00000589838 ECM29Q5VYK3 1845 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 ZPR1O75312 459 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 NOLC1Q14978 699 aaKnown RBP eCLIP22.21■■□□□ 1.151e-10■□□□□ 9.6
PRKCSH-209ENST00000589838 IQCB1Q15051 598 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 PPP2R5BQ15173 497 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 ZRSR1Q15695 479 aaKnown RBP22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 C3orf67Q6ZVT6 689 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 PLA2G4DQ86XP0 818 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 CCDC144CPQ8IYA2 1237 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 MPNDQ8N594 471 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 C8orf37Q96NL8 207 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 GJB4Q9NTQ9 266 aa22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 R3HCC1Q9Y3T6 440 aaKnown RBP22.21■■□□□ 1.15
PRKCSH-209ENST00000589838 A0A1B0GVL5 298 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 PPP6R2O75170 966 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 U2AF2P26368 475 aaKnown RBP eCLIP22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 RPS8P62241 208 aaKnown RBP22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 RTN1Q16799 776 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 TMED8Q6PL24 325 aaPredicted RBP22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 CEP57L1Q8IYX8 460 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 SPC24Q8NBT2 197 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 ESR2Q92731 530 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 SLC26A6Q9BXS9 759 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 IQSEC3Q9UPP2 1182 aaPredicted RBP22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 TACC3Q9Y6A5 838 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 PDS5AQ29RF7 1337 aaKnown RBP22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 BECN2A8MW95 431 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 PCP11498 1178 aaKnown RBP22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 CDC25BP30305 580 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 NDUFA8P51970 172 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 SAFBQ15424 915 aaKnown RBP eCLIP22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 SARM1Q6SZW1 724 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 FBXO33Q7Z6M2 555 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 DRC7Q8IY82 874 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 FAM84BQ96KN1 310 aaPredicted RBP22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 UBAC1Q9BSL1 405 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
PRKCSH-209ENST00000589838 TAF1P21675 1872 aa22.19■■□□□ 1.14
PRKCSH-209ENST00000589838 COL4A1P02462 1669 aa22.19■■□□□ 1.14
PRKCSH-209ENST00000589838 RANBP6O60518 1105 aaKnown RBP22.19■■□□□ 1.14
PRKCSH-209ENST00000589838 TPTE2Q6XPS3 522 aa22.19■■□□□ 1.14
PRKCSH-209ENST00000589838 NBPF5PQ86XG9 351 aaPredicted RBP22.19■■□□□ 1.14
PRKCSH-209ENST00000589838 AIFM3Q96NN9 605 aa22.19■■□□□ 1.14
PRKCSH-209ENST00000589838 BRIP1Q9BX63 1249 aa22.19■■□□□ 1.14
PRKCSH-209ENST00000589838 COL24A1Q17RW2 1714 aa22.19■■□□□ 1.14
PRKCSH-209ENST00000589838 AXDND1Q5T1B0 1012 aaPredicted RBP22.18■■□□□ 1.14
PRKCSH-209ENST00000589838 CELF1Q92879 486 aaKnown RBP22.18■■□□□ 1.14
PRKCSH-209ENST00000589838 TIGD1Q96MW7 591 aa22.18■■□□□ 1.14
PRKCSH-209ENST00000589838 MYL10Q9BUA6 226 aa22.18■■□□□ 1.14
PRKCSH-209ENST00000589838 BTAF1O14981 1849 aa22.18■■□□□ 1.14
PRKCSH-209ENST00000589838 MINDY4BA8MYZ0 360 aa22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 C11orf57Q6ZUT1 292 aaPredicted RBP22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 FNBP4Q8N3X1 1017 aaPredicted RBP22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 RIOK1Q9BRS2 568 aaKnown RBP22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 SPTLC3Q9NUV7 552 aa22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 KIAA1468Q9P260 1216 aa22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 CACNA1SQ13698 1873 aa22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 MYH13Q9UKX3 1938 aa22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 ZNF202O95125 648 aa22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 ADGRA1Q86SQ6 560 aa22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
PRKCSH-209ENST00000589838 DEXIO95424 95 aa22.16■■□□□ 1.14
PRKCSH-209ENST00000589838 DNTTIP2Q5QJE6 756 aaKnown RBP22.16■■□□□ 1.14
PRKCSH-209ENST00000589838 NHSQ6T4R5 1651 aa22.16■■□□□ 1.14
PRKCSH-209ENST00000589838 ZBTB22O15209 634 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 GNPATO15228 680 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 SLC3A2P08195 630 aaKnown RBP22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 KCNQ4P56696 695 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 RBM6P78332 1123 aaKnown RBP22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 ZNF654Q8IZM8 581 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 FANCBQ8NB91 859 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 SDR42E1Q8WUS8 393 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 COL1A1P02452 1464 aaPredicted RBP22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 KIAA1524Q8TCG1 905 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 MRFAP1L1Q96HT8 127 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 BPIFA3Q9BQP9 254 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 ZKSCAN3Q9BRR0 538 aa22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 CCNL1Q9UK58 526 aaPredicted RBP22.15■■□□□ 1.14
PRKCSH-209ENST00000589838 CUTAO60888 179 aa22.14■■□□□ 1.13
PRKCSH-209ENST00000589838 IGSF3O75054 1194 aa22.14■■□□□ 1.13
PRKCSH-209ENST00000589838 PFKFB1P16118 471 aa22.14■■□□□ 1.13
PRKCSH-209ENST00000589838 HIBADHP31937 336 aaKnown RBP22.14■■□□□ 1.13
PRKCSH-209ENST00000589838 PTPAQ15257 358 aa22.14■■□□□ 1.13
PRKCSH-209ENST00000589838 CRACR2BQ8N4Y2 399 aaPredicted RBP22.14■■□□□ 1.13
PRKCSH-209ENST00000589838 KCNF1Q9H3M0 494 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms