RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 WDR63Q8IWG1 891 aa27.29■■□□□ 1.96
CAPNS1-205ENST00000588780 DIS3LQ8TF46 1054 aaKnown RBP27.29■■□□□ 1.96
CAPNS1-205ENST00000588780 PAK6Q9NQU5 681 aaPredicted RBP27.29■■□□□ 1.96
CAPNS1-205ENST00000588780 FAM198AQ9UFP1 575 aa27.29■■□□□ 1.96
CAPNS1-205ENST00000588780 LDHBP07195 334 aaKnown RBP27.28■■□□□ 1.96
CAPNS1-205ENST00000588780 PTPRAP18433 802 aa27.28■■□□□ 1.96
CAPNS1-205ENST00000588780 Q7L0L9 218 aa27.28■■□□□ 1.96
CAPNS1-205ENST00000588780 ANKRD13CQ8N6S4 541 aa27.28■■□□□ 1.96
CAPNS1-205ENST00000588780 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.28■■□□□ 1.96
CAPNS1-205ENST00000588780 TRIM75PA6NK02 468 aa27.27■■□□□ 1.96
CAPNS1-205ENST00000588780 RABL6Q3YEC7 729 aaPredicted RBP27.27■■□□□ 1.96
CAPNS1-205ENST00000588780 CCDC184Q52MB2 194 aa27.27■■□□□ 1.96
CAPNS1-205ENST00000588780 ZFPM1Q8IX07 1006 aa27.27■■□□□ 1.96
CAPNS1-205ENST00000588780 CRISPLD2Q9H0B8 497 aa27.27■■□□□ 1.96
CAPNS1-205ENST00000588780 KIF16BQ96L93 1317 aa27.26■■□□□ 1.95
CAPNS1-205ENST00000588780 PRDX5P30044 214 aa27.26■■□□□ 1.95
CAPNS1-205ENST00000588780 ANKRD44Q8N8A2 993 aa27.26■■□□□ 1.95
CAPNS1-205ENST00000588780 GDF15Q99988 308 aa27.26■■□□□ 1.95
CAPNS1-205ENST00000588780 SLC45A1Q9Y2W3 748 aa27.26■■□□□ 1.95
CAPNS1-205ENST00000588780 AFG3L2Q9Y4W6 797 aa27.26■■□□□ 1.95
CAPNS1-205ENST00000588780 SYN1P17600 705 aa27.25■■□□□ 1.95
CAPNS1-205ENST00000588780 BMP8BP34820 402 aa27.25■■□□□ 1.95
CAPNS1-205ENST00000588780 COL6A3P12111 3177 aa27.24■■□□□ 1.95
CAPNS1-205ENST00000588780 PHF20L1A8MW92 1017 aa27.24■■□□□ 1.95
CAPNS1-205ENST00000588780 FGFR2P21802 821 aa27.24■■□□□ 1.95
CAPNS1-205ENST00000588780 RGS3P49796 1198 aa27.24■■□□□ 1.95
CAPNS1-205ENST00000588780 GPR153Q6NV75 609 aa27.24■■□□□ 1.95
CAPNS1-205ENST00000588780 LPIN2Q92539 896 aa27.24■■□□□ 1.95
CAPNS1-205ENST00000588780 GNL3LQ9NVN8 582 aaKnown RBP27.24■■□□□ 1.95
CAPNS1-205ENST00000588780 A0A0C4DFX4 3053 aa27.24■■□□□ 1.95
CAPNS1-205ENST00000588780 UTYO14607 1347 aa27.23■■□□□ 1.95
CAPNS1-205ENST00000588780 NCBP3Q53F19 620 aaKnown RBP27.23■■□□□ 1.95
CAPNS1-205ENST00000588780 NBPF3Q9H094 633 aa27.23■■□□□ 1.95
CAPNS1-205ENST00000588780 PNMA3Q9UL41 463 aa27.23■■□□□ 1.95
CAPNS1-205ENST00000588780 STXBP5LQ9Y2K9 1186 aa27.23■■□□□ 1.95
CAPNS1-205ENST00000588780 MYH13Q9UKX3 1938 aa27.23■■□□□ 1.95
CAPNS1-205ENST00000588780 ANKLE1Q8NAG6 615 aa27.22■■□□□ 1.95
CAPNS1-205ENST00000588780 HMGCRP04035 888 aa27.21■■□□□ 1.95
CAPNS1-205ENST00000588780 AGTPBP1Q9UPW5 1226 aa27.21■■□□□ 1.95
CAPNS1-205ENST00000588780 ENTPD3O75355 529 aa27.2■■□□□ 1.94
CAPNS1-205ENST00000588780 MAGEA10P43363 369 aaPredicted RBP27.2■■□□□ 1.94
CAPNS1-205ENST00000588780 UBE2OQ9C0C9 1292 aaKnown RBP27.2■■□□□ 1.94
CAPNS1-205ENST00000588780 HMX1Q9NP08 348 aaPredicted RBP27.2■■□□□ 1.94
CAPNS1-205ENST00000588780 ALPK3Q96L96 1907 aa27.2■■□□□ 1.94
CAPNS1-205ENST00000588780 EYA2O00167 538 aa27.19■■□□□ 1.94
CAPNS1-205ENST00000588780 CTNND1O60716 968 aaKnown RBP27.19■■□□□ 1.94
CAPNS1-205ENST00000588780 PICALMQ13492 652 aa27.19■■□□□ 1.94
CAPNS1-205ENST00000588780 CCDC84Q86UT8 332 aaPredicted RBP27.19■■□□□ 1.94
CAPNS1-205ENST00000588780 TDHQ8IZJ6 230 aa27.19■■□□□ 1.94
CAPNS1-205ENST00000588780 C11orf49Q9H6J7 331 aa27.19■■□□□ 1.94
CAPNS1-205ENST00000588780 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.19■■□□□ 1.94
CAPNS1-205ENST00000588780 LAMA3Q16787 3333 aa27.18■■□□□ 1.94
CAPNS1-205ENST00000588780 FAM110CQ1W6H9 321 aa27.18■■□□□ 1.94
CAPNS1-205ENST00000588780 LRIT3Q3SXY7 679 aa27.18■■□□□ 1.94
CAPNS1-205ENST00000588780 DOCK2Q92608 1830 aa27.18■■□□□ 1.94
CAPNS1-205ENST00000588780 RPTORQ8N122 1335 aa27.17■■□□□ 1.94
CAPNS1-205ENST00000588780 TREML2Q5T2D2 321 aa27.17■■□□□ 1.94
CAPNS1-205ENST00000588780 MTMR10Q9NXD2 777 aa27.17■■□□□ 1.94
CAPNS1-205ENST00000588780 DOCK3Q8IZD9 2030 aa27.17■■□□□ 1.94
CAPNS1-205ENST00000588780 SLURP2P0DP57 97 aa27.16■■□□□ 1.94
CAPNS1-205ENST00000588780 ATP2B3Q16720 1220 aa27.16■■□□□ 1.94
CAPNS1-205ENST00000588780 DZIP1Q86YF9 867 aaKnown RBP27.16■■□□□ 1.94
CAPNS1-205ENST00000588780 IDI2Q9BXS1 227 aa27.16■■□□□ 1.94
CAPNS1-205ENST00000588780 DENND2AQ9ULE3 1009 aa27.16■■□□□ 1.94
CAPNS1-205ENST00000588780 ATRNL1Q5VV63 1379 aa27.16■■□□□ 1.94
CAPNS1-205ENST00000588780 DDTLA6NHG4 134 aaPredicted RBP27.15■■□□□ 1.94
CAPNS1-205ENST00000588780 SH3BP5LQ7L8J4 393 aa27.15■■□□□ 1.94
CAPNS1-205ENST00000588780 SIL1Q9H173 461 aa27.15■■□□□ 1.94
CAPNS1-205ENST00000588780 MRS2Q9HD23 443 aa27.15■■□□□ 1.94
CAPNS1-205ENST00000588780 GCLCP48506 637 aaPredicted RBP27.14■■□□□ 1.94
CAPNS1-205ENST00000588780 TRIM32Q13049 653 aa27.14■■□□□ 1.94
CAPNS1-205ENST00000588780 ZGPATQ8N5A5 531 aaKnown RBP27.14■■□□□ 1.94
CAPNS1-205ENST00000588780 PABPC4Q13310 644 aaKnown RBP eCLIP27.13■■□□□ 1.934e-8■■□□□ 14.3
CAPNS1-205ENST00000588780 SLF2Q8IX21 1173 aa27.13■■□□□ 1.93
CAPNS1-205ENST00000588780 CEP126Q9P2H0 1117 aa27.13■■□□□ 1.93
CAPNS1-205ENST00000588780 ABCF2Q9UG63 623 aa27.13■■□□□ 1.93
CAPNS1-205ENST00000588780 SPP2Q13103 211 aa27.12■■□□□ 1.93
CAPNS1-205ENST00000588780 PROCA1Q8NCQ7 364 aaPredicted RBP27.12■■□□□ 1.93
CAPNS1-205ENST00000588780 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.12■■□□□ 1.93
CAPNS1-205ENST00000588780 DOCK1Q14185 1865 aa27.12■■□□□ 1.93
CAPNS1-205ENST00000588780 SALL1Q9NSC2 1324 aa27.12■■□□□ 1.93
CAPNS1-205ENST00000588780 PHKA1P46020 1223 aa27.11■■□□□ 1.93
CAPNS1-205ENST00000588780 COL25A1Q9BXS0 654 aaPredicted RBP27.11■■□□□ 1.93
CAPNS1-205ENST00000588780 PTPRFP10586 1907 aa27.11■■□□□ 1.93
CAPNS1-205ENST00000588780 SEMA3EO15041 775 aa27.1■■□□□ 1.93
CAPNS1-205ENST00000588780 CYP2B6P20813 491 aa27.1■■□□□ 1.93
CAPNS1-205ENST00000588780 BTDP43251 543 aa27.1■■□□□ 1.93
CAPNS1-205ENST00000588780 HMGCS2P54868 508 aa27.1■■□□□ 1.93
CAPNS1-205ENST00000588780 MAP3K10Q02779 954 aa27.1■■□□□ 1.93
CAPNS1-205ENST00000588780 USP44Q9H0E7 712 aa27.1■■□□□ 1.93
CAPNS1-205ENST00000588780 DDX4Q9NQI0 724 aaKnown RBP27.1■■□□□ 1.93
CAPNS1-205ENST00000588780 MYH2Q9UKX2 1941 aa27.1■■□□□ 1.93
CAPNS1-205ENST00000588780 FAM196BA6NMK8 535 aa27.09■■□□□ 1.93
CAPNS1-205ENST00000588780 RFX5P48382 616 aaPredicted RBP27.09■■□□□ 1.93
CAPNS1-205ENST00000588780 ATG9AQ7Z3C6 839 aa27.09■■□□□ 1.93
CAPNS1-205ENST00000588780 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.09■■□□□ 1.93
CAPNS1-205ENST00000588780 DDX60LQ5H9U9 1706 aaKnown RBP27.09■■□□□ 1.93
CAPNS1-205ENST00000588780 ZNF280CQ8ND82 737 aa27.08■■□□□ 1.93
CAPNS1-205ENST00000588780 ASCC2Q9H1I8 757 aaPredicted RBP27.08■■□□□ 1.93
CAPNS1-205ENST00000588780 GJD2Q9UKL4 321 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms