RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 LRRC24Q50LG9 513 aa18.49■□□□□ 0.55
RANBP3-208ENST00000587263 CDC42EP5Q6NZY7 148 aa18.49■□□□□ 0.55
RANBP3-208ENST00000587263 SCYL3Q8IZE3 742 aa18.49■□□□□ 0.55
RANBP3-208ENST00000587263 TDHQ8IZJ6 230 aa18.49■□□□□ 0.55
RANBP3-208ENST00000587263 VGLL2Q8N8G2 317 aa18.49■□□□□ 0.55
RANBP3-208ENST00000587263 SRCIN1Q9C0H9 1055 aa18.49■□□□□ 0.55
RANBP3-208ENST00000587263 DAGLAQ9Y4D2 1042 aa18.49■□□□□ 0.55
RANBP3-208ENST00000587263 NFIAQ12857 509 aa18.48■□□□□ 0.55
RANBP3-208ENST00000587263 KAZALD1Q96I82 304 aa18.48■□□□□ 0.55
RANBP3-208ENST00000587263 COL25A1Q9BXS0 654 aaPredicted RBP18.48■□□□□ 0.55
RANBP3-208ENST00000587263 NBPF3Q9H094 633 aa18.48■□□□□ 0.55
RANBP3-208ENST00000587263 AK9Q5TCS8 1911 aa18.48■□□□□ 0.55
RANBP3-208ENST00000587263 PTPRAP18433 802 aa18.47■□□□□ 0.55
RANBP3-208ENST00000587263 MAGEA10P43363 369 aaPredicted RBP18.47■□□□□ 0.55
RANBP3-208ENST00000587263 PUM3Q15397 648 aaKnown RBP18.47■□□□□ 0.55
RANBP3-208ENST00000587263 SLC4A10Q6U841 1118 aa18.47■□□□□ 0.55
RANBP3-208ENST00000587263 FAM198AQ9UFP1 575 aa18.47■□□□□ 0.55
RANBP3-208ENST00000587263 AFG3L2Q9Y4W6 797 aa18.47■□□□□ 0.55
RANBP3-208ENST00000587263 HMGCRP04035 888 aa18.46■□□□□ 0.55
RANBP3-208ENST00000587263 DIXDC1Q155Q3 683 aa18.46■□□□□ 0.55
RANBP3-208ENST00000587263 RABL6Q3YEC7 729 aaPredicted RBP18.46■□□□□ 0.55
RANBP3-208ENST00000587263 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
RANBP3-208ENST00000587263 PNMA3Q9UL41 463 aa18.46■□□□□ 0.55
RANBP3-208ENST00000587263 ATRNL1Q5VV63 1379 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 PHF20L1A8MW92 1017 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 SYN1P17600 705 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 EXOSC9Q06265 439 aaKnown RBP18.45■□□□□ 0.54
RANBP3-208ENST00000587263 FAM110CQ1W6H9 321 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 ANKRD13CQ8N6S4 541 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 UBE2OQ9C0C9 1292 aaKnown RBP18.45■□□□□ 0.54
RANBP3-208ENST00000587263 BICC1Q9H694 974 aaKnown RBP18.45■□□□□ 0.54
RANBP3-208ENST00000587263 C11orf49Q9H6J7 331 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 HMX1Q9NP08 348 aaPredicted RBP18.45■□□□□ 0.54
RANBP3-208ENST00000587263 USP40Q9NVE5 1235 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 AGTPBP1Q9UPW5 1226 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 UTYO14607 1347 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 RPTORQ8N122 1335 aa18.45■□□□□ 0.54
RANBP3-208ENST00000587263 DOCK2Q92608 1830 aa18.44■□□□□ 0.54
RANBP3-208ENST00000587263 NBPF7P0C2Y1 421 aaPredicted RBP18.44■□□□□ 0.54
RANBP3-208ENST00000587263 FGFR2P21802 821 aa18.44■□□□□ 0.54
RANBP3-208ENST00000587263 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.44■□□□□ 0.54
RANBP3-208ENST00000587263 LRRFIP2Q9Y608 721 aaKnown RBP18.44■□□□□ 0.54
RANBP3-208ENST00000587263 MYH13Q9UKX3 1938 aa18.43■□□□□ 0.54
RANBP3-208ENST00000587263 PRDX5P30044 214 aa18.43■□□□□ 0.54
RANBP3-208ENST00000587263 TRIM75PA6NK02 468 aa18.42■□□□□ 0.54
RANBP3-208ENST00000587263 CTNND1O60716 968 aaKnown RBP18.42■□□□□ 0.54
RANBP3-208ENST00000587263 ENTPD3O75355 529 aa18.42■□□□□ 0.54
RANBP3-208ENST00000587263 LDHBP07195 334 aaKnown RBP18.42■□□□□ 0.54
RANBP3-208ENST00000587263 SLC5A1P13866 664 aa18.42■□□□□ 0.54
RANBP3-208ENST00000587263 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
RANBP3-208ENST00000587263 PTPRFP10586 1907 aa18.42■□□□□ 0.54
RANBP3-208ENST00000587263 UNC80Q8N2C7 3258 aa18.41■□□□□ 0.54
RANBP3-208ENST00000587263 DDX60LQ5H9U9 1706 aaKnown RBP18.41■□□□□ 0.54
RANBP3-208ENST00000587263 GCLCP48506 637 aaPredicted RBP18.41■□□□□ 0.54
RANBP3-208ENST00000587263 RGS3P49796 1198 aa18.41■□□□□ 0.54
RANBP3-208ENST00000587263 WDR63Q8IWG1 891 aa18.41■□□□□ 0.54
RANBP3-208ENST00000587263 ZSCAN29Q8IWY8 852 aaPredicted RBP18.41■□□□□ 0.54
RANBP3-208ENST00000587263 ANKRD44Q8N8A2 993 aa18.41■□□□□ 0.54
RANBP3-208ENST00000587263 LPIN2Q92539 896 aa18.41■□□□□ 0.54
RANBP3-208ENST00000587263 IDI2Q9BXS1 227 aa18.41■□□□□ 0.54
RANBP3-208ENST00000587263 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
RANBP3-208ENST00000587263 OGDHLQ9ULD0 1010 aa18.41■□□□□ 0.54
RANBP3-208ENST00000587263 DOCK1Q14185 1865 aa18.41■□□□□ 0.54
RANBP3-208ENST00000587263 MAP3K10Q02779 954 aa18.4■□□□□ 0.54
RANBP3-208ENST00000587263 PROCA1Q8NCQ7 364 aaPredicted RBP18.39■□□□□ 0.53
RANBP3-208ENST00000587263 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
RANBP3-208ENST00000587263 GNL3LQ9NVN8 582 aaKnown RBP18.39■□□□□ 0.53
RANBP3-208ENST00000587263 SALL1Q9NSC2 1324 aa18.39■□□□□ 0.53
RANBP3-208ENST00000587263 DOCK3Q8IZD9 2030 aa18.39■□□□□ 0.53
RANBP3-208ENST00000587263 PABPC4Q13310 644 aaKnown RBP eCLIP18.38■□□□□ 0.53
RANBP3-208ENST00000587263 TREML2Q5T2D2 321 aa18.38■□□□□ 0.53
RANBP3-208ENST00000587263 FAM109BQ6ICB4 259 aaPredicted RBP18.38■□□□□ 0.53
RANBP3-208ENST00000587263 GJD2Q9UKL4 321 aa18.38■□□□□ 0.53
RANBP3-208ENST00000587263 RFX7Q2KHR2 1363 aa18.38■□□□□ 0.53
RANBP3-208ENST00000587263 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
RANBP3-208ENST00000587263 CCER2I3L3R5 266 aa18.37■□□□□ 0.53
RANBP3-208ENST00000587263 TRIM32Q13049 653 aa18.37■□□□□ 0.53
RANBP3-208ENST00000587263 SH3BP5LQ7L8J4 393 aa18.37■□□□□ 0.53
RANBP3-208ENST00000587263 PFASO15067 1338 aa18.37■□□□□ 0.53
RANBP3-208ENST00000587263 EYA2O00167 538 aa18.36■□□□□ 0.53
RANBP3-208ENST00000587263 SEMA3EO15041 775 aa18.36■□□□□ 0.53
RANBP3-208ENST00000587263 CCDC84Q86UT8 332 aaPredicted RBP18.36■□□□□ 0.53
RANBP3-208ENST00000587263 ZGPATQ8N5A5 531 aaKnown RBP18.36■□□□□ 0.53
RANBP3-208ENST00000587263 TRIB2Q92519 343 aa18.36■□□□□ 0.53
RANBP3-208ENST00000587263 GAKO14976 1311 aa18.35■□□□□ 0.53
RANBP3-208ENST00000587263 DDTLA6NHG4 134 aaPredicted RBP18.35■□□□□ 0.53
RANBP3-208ENST00000587263 POTEB2H3BUK9 544 aa18.35■□□□□ 0.53
RANBP3-208ENST00000587263 MAP3K21Q5TCX8 1036 aa18.35■□□□□ 0.53
RANBP3-208ENST00000587263 SLF2Q8IX21 1173 aa18.35■□□□□ 0.53
RANBP3-208ENST00000587263 GUCD1Q96NT3 240 aa18.35■□□□□ 0.53
RANBP3-208ENST00000587263 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
RANBP3-208ENST00000587263 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.35■□□□□ 0.53
RANBP3-208ENST00000587263 DENND2AQ9ULE3 1009 aa18.35■□□□□ 0.53
RANBP3-208ENST00000587263 LOC285556D6RIA3 1793 aa18.35■□□□□ 0.53
RANBP3-208ENST00000587263 COL6A1P12109 1028 aa18.34■□□□□ 0.53
RANBP3-208ENST00000587263 PRKAR2AP13861 404 aaKnown RBP18.34■□□□□ 0.53
RANBP3-208ENST00000587263 SPP2Q13103 211 aa18.34■□□□□ 0.53
RANBP3-208ENST00000587263 MORF4L1Q9UBU8 362 aa18.34■□□□□ 0.53
RANBP3-208ENST00000587263 COL2A1P02458 1487 aaPredicted RBP18.33■□□□□ 0.53
RANBP3-208ENST00000587263 TBC1D12O60347 775 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms