RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 TSPYL1Q9H0U9 437 aa7.64□□□□□ -1.19
SMAD4-203ENST00000585448 TPSG1Q9NRR2 321 aa7.64□□□□□ -1.19
SMAD4-203ENST00000585448 DYNC1I1O14576 645 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 OFD1O75665 1012 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 ALX3O95076 343 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 CTSBP07858 339 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 RLBP1P12271 317 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 ZSCAN20P17040 1043 aaPredicted RBP7.63□□□□□ -1.19
SMAD4-203ENST00000585448 BMP6P22004 513 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 TAF1CQ15572 869 aaPredicted RBP7.63□□□□□ -1.19
SMAD4-203ENST00000585448 NKAPLQ5M9Q1 402 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 NUTM2GQ5VZR2 741 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.63□□□□□ -1.19
SMAD4-203ENST00000585448 UBL7Q96S82 380 aaPredicted RBP7.63□□□□□ -1.19
SMAD4-203ENST00000585448 PLCD4Q9BRC7 762 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 GSX1Q9H4S2 264 aaPredicted RBP7.63□□□□□ -1.19
SMAD4-203ENST00000585448 CYP8B1Q9UNU6 501 aa7.63□□□□□ -1.19
SMAD4-203ENST00000585448 TTF2Q9UNY4 1162 aaKnown RBP7.63□□□□□ -1.19
SMAD4-203ENST00000585448 RNF123Q5XPI4 1314 aa7.62□□□□□ -1.19
SMAD4-203ENST00000585448 FSD2A1L4K1 749 aa7.62□□□□□ -1.19
SMAD4-203ENST00000585448 DDX10Q13206 875 aaKnown RBP7.62□□□□□ -1.19
SMAD4-203ENST00000585448 LRRC14Q15048 493 aa7.62□□□□□ -1.19
SMAD4-203ENST00000585448 KIF4BQ2VIQ3 1234 aa7.62□□□□□ -1.19
SMAD4-203ENST00000585448 FDX2Q6P4F2 183 aa7.62□□□□□ -1.19
SMAD4-203ENST00000585448 FAM161BQ96MY7 647 aa7.62□□□□□ -1.19
SMAD4-203ENST00000585448 GEMIN8Q9NWZ8 242 aaKnown RBP7.62□□□□□ -1.19
SMAD4-203ENST00000585448 CEP162Q5TB80 1403 aa7.61□□□□□ -1.19
SMAD4-203ENST00000585448 ZBED9Q6R2W3 1325 aa7.61□□□□□ -1.19
SMAD4-203ENST00000585448 TRIM37O94972 964 aa7.61□□□□□ -1.19
SMAD4-203ENST00000585448 GLB1P16278 677 aa7.61□□□□□ -1.19
SMAD4-203ENST00000585448 ZNF157P51786 506 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-203ENST00000585448 SETQ01105 290 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-203ENST00000585448 RSPO4Q2I0M5 234 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-203ENST00000585448 MYRFLQ96LU7 910 aa7.61□□□□□ -1.19
SMAD4-203ENST00000585448 VTI1BQ9UEU0 232 aa7.61□□□□□ -1.19
SMAD4-203ENST00000585448 VGLL3A8MV65 326 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 PAGE1O75459 146 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 FRAT2O75474 233 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-203ENST00000585448 ECEL1O95672 775 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 CELA3AP09093 270 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 XRCC6P12956 609 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMAD4-203ENST00000585448 RIPK4P57078 832 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 SOX4Q06945 474 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-203ENST00000585448 RALBP1Q15311 655 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 MEI1Q5TIA1 1274 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 PCNX4Q63HM2 1172 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 SLC51AQ86UW1 340 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 ARMC10Q8N2F6 343 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 STK35Q8TDR2 534 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 WDR18Q9BV38 432 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 CCDC86Q9H6F5 360 aaKnown RBP7.6□□□□□ -1.19
SMAD4-203ENST00000585448 MYH16Q9H6N6 1097 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 KCNG1Q9UIX4 513 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 PCDHGC5Q9Y5F6 944 aa7.6□□□□□ -1.19
SMAD4-203ENST00000585448 PHLDB1Q86UU1 1377 aa7.59□□□□□ -1.19
SMAD4-203ENST00000585448 TNIKQ9UKE5 1360 aa7.59□□□□□ -1.19
SMAD4-203ENST00000585448 PEG3Q9GZU2 1588 aa7.59□□□□□ -1.19
SMAD4-203ENST00000585448 ZNF862O60290 1169 aa7.59□□□□□ -1.19
SMAD4-203ENST00000585448 AOC2O75106 756 aa7.59□□□□□ -1.19
SMAD4-203ENST00000585448 FBXO24O75426 580 aa7.59□□□□□ -1.19
SMAD4-203ENST00000585448 ADH5P11766 374 aa7.59□□□□□ -1.19
SMAD4-203ENST00000585448 PREPP48147 710 aa7.59□□□□□ -1.19
SMAD4-203ENST00000585448 CCDC85BQ15834 202 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-203ENST00000585448 CC2D1BQ5T0F9 858 aaKnown RBP7.59□□□□□ -1.19
SMAD4-203ENST00000585448 TP53INP1Q96A56 240 aa7.59□□□□□ -1.19
SMAD4-203ENST00000585448 SMG6Q86US8 1419 aaKnown RBP7.59□□□□□ -1.19
SMAD4-203ENST00000585448 DOC2BQ14184 412 aa7.58□□□□□ -1.2
SMAD4-203ENST00000585448 AGMOQ6ZNB7 445 aa7.58□□□□□ -1.2
SMAD4-203ENST00000585448 PRR23CQ6ZRP0 262 aa7.58□□□□□ -1.2
SMAD4-203ENST00000585448 C2CD4AQ8NCU7 369 aaPredicted RBP7.58□□□□□ -1.2
SMAD4-203ENST00000585448 UTP4Q969X6 686 aaKnown RBP7.58□□□□□ -1.2
SMAD4-203ENST00000585448 DHX15O43143 795 aaKnown RBP7.57□□□□□ -1.2
SMAD4-203ENST00000585448 SART1O43290 800 aaKnown RBP7.57□□□□□ -1.2
SMAD4-203ENST00000585448 SLFN14P0C7P3 912 aa7.57□□□□□ -1.2
SMAD4-203ENST00000585448 PDE3AQ14432 1141 aa7.57□□□□□ -1.2
SMAD4-203ENST00000585448 TTBK2Q6IQ55 1244 aa7.57□□□□□ -1.2
SMAD4-203ENST00000585448 LLGL2Q6P1M3 1020 aa7.57□□□□□ -1.2
SMAD4-203ENST00000585448 EZH1Q92800 747 aaPredicted RBP7.57□□□□□ -1.2
SMAD4-203ENST00000585448 RSRP1Q9BUV0 290 aa7.57□□□□□ -1.2
SMAD4-203ENST00000585448 CRIM1Q9NZV1 1036 aa7.57□□□□□ -1.2
SMAD4-203ENST00000585448 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.56□□□□□ -1.2
SMAD4-203ENST00000585448 CCDC66A2RUB6 948 aa7.56□□□□□ -1.2
SMAD4-203ENST00000585448 TMPRSS2O15393 492 aa7.56□□□□□ -1.2
SMAD4-203ENST00000585448 DYRK3O43781 588 aa7.56□□□□□ -1.2
SMAD4-203ENST00000585448 LIG3P49916 1009 aa7.56□□□□□ -1.2
SMAD4-203ENST00000585448 PWP1Q13610 501 aa7.56□□□□□ -1.2
SMAD4-203ENST00000585448 LDLRAD1Q5T700 205 aa7.56□□□□□ -1.2
SMAD4-203ENST00000585448 FAM20CQ8IXL6 584 aa7.56□□□□□ -1.2
SMAD4-203ENST00000585448 C12orf50Q8NA57 414 aaPredicted RBP7.56□□□□□ -1.2
SMAD4-203ENST00000585448 RAD18Q9NS91 495 aa7.56□□□□□ -1.2
SMAD4-203ENST00000585448 RAXQ9Y2V3 346 aa7.56□□□□□ -1.2
SMAD4-203ENST00000585448 HS1BP3Q53T59 392 aa7.55□□□□□ -1.2
SMAD4-203ENST00000585448 ZC3H12AQ5D1E8 599 aaKnown RBP7.55□□□□□ -1.2
SMAD4-203ENST00000585448 RASIP1Q5U651 963 aa7.55□□□□□ -1.2
SMAD4-203ENST00000585448 MAP1SQ66K74 1059 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-203ENST00000585448 CCDC84Q86UT8 332 aaPredicted RBP7.55□□□□□ -1.2
SMAD4-203ENST00000585448 CLEC10AQ8IUN9 316 aa7.55□□□□□ -1.2
SMAD4-203ENST00000585448 KCNB2Q92953 911 aa7.55□□□□□ -1.2
SMAD4-203ENST00000585448 GAL3ST3Q96A11 431 aa7.55□□□□□ -1.2
SMAD4-203ENST00000585448 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms