RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ANKRD24Q8TF21 1146 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 GATA6Q92908 595 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 KRTAP4-8Q9BYQ9 185 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 GSX1Q9H4S2 264 aaPredicted RBP6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 CBX8Q9HC52 389 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 CRIM1Q9NZV1 1036 aa6.75□□□□□ -1.33
PPP4R1-227ENST00000583988 RNGTTO60942 597 aaKnown RBP6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 FBXO24O75426 580 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 USP17L7P0C7H9 530 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 VAMP1P23763 118 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 PDZD3Q86UT5 571 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 FAM161BQ96MY7 647 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 FANCD2OSQ96PS1 177 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 ATXN3LQ9H3M9 355 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 C1GALT1Q9NS00 363 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 KRT82Q9NSB4 513 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 PPM1HQ9ULR3 514 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 ANGEL1Q9UNK9 670 aaKnown RBP6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 SYNGAP1Q96PV0 1343 aa6.74□□□□□ -1.33
PPP4R1-227ENST00000583988 SORBS3O60504 671 aa6.73□□□□□ -1.33
PPP4R1-227ENST00000583988 HCLS1P14317 486 aaPredicted RBP6.73□□□□□ -1.33
PPP4R1-227ENST00000583988 NME2P22392 152 aa6.73□□□□□ -1.33
PPP4R1-227ENST00000583988 ARNTP27540 789 aa6.73□□□□□ -1.33
PPP4R1-227ENST00000583988 IRAK1P51617 712 aa6.73□□□□□ -1.33
PPP4R1-227ENST00000583988 CYP27A1Q02318 531 aa6.73□□□□□ -1.33
PPP4R1-227ENST00000583988 KIF4BQ2VIQ3 1234 aa6.73□□□□□ -1.33
PPP4R1-227ENST00000583988 ACSBG1Q96GR2 724 aa6.73□□□□□ -1.33
PPP4R1-227ENST00000583988 CDK5R2Q13319 367 aa6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 TTLL4Q14679 1199 aa6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 MSMPQ1L6U9 139 aa6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 MCTP1Q6DN14 999 aa6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 SEZ6L2Q6UXD5 910 aa6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 SMYD4Q8IYR2 804 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 NECAB3Q96P71 396 aaPredicted RBP6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 EMILIN2Q9BXX0 1053 aa6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 CEP44Q9C0F1 390 aa6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 DISC1Q9NRI5 854 aa6.72□□□□□ -1.33
PPP4R1-227ENST00000583988 PAGE1O75459 146 aa6.71□□□□□ -1.34
PPP4R1-227ENST00000583988 CTSHP09668 335 aa6.71□□□□□ -1.34
PPP4R1-227ENST00000583988 MPRIPQ6WCQ1 1025 aa6.71□□□□□ -1.34
PPP4R1-227ENST00000583988 MRS2Q9HD23 443 aa6.71□□□□□ -1.34
PPP4R1-227ENST00000583988 SSU72Q9NP77 194 aaKnown RBP6.71□□□□□ -1.34
PPP4R1-227ENST00000583988 CCDC39Q9UFE4 941 aa6.71□□□□□ -1.34
PPP4R1-227ENST00000583988 PCDHGC5Q9Y5F6 944 aa6.71□□□□□ -1.34
PPP4R1-227ENST00000583988 USP31Q70CQ4 1352 aa6.7□□□□□ -1.34
PPP4R1-227ENST00000583988 ENC1O14682 589 aa6.7□□□□□ -1.34
PPP4R1-227ENST00000583988 FAM87AP0C7U9 286 aa6.7□□□□□ -1.34
PPP4R1-227ENST00000583988 MRPL58Q14197 206 aaKnown RBP6.7□□□□□ -1.34
PPP4R1-227ENST00000583988 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
PPP4R1-227ENST00000583988 GRIN3AQ8TCU5 1115 aa6.7□□□□□ -1.34
PPP4R1-227ENST00000583988 GPBAR1Q8TDU6 330 aa6.7□□□□□ -1.34
PPP4R1-227ENST00000583988 BSDC1Q9NW68 430 aaPredicted RBP6.7□□□□□ -1.34
PPP4R1-227ENST00000583988 ZC3H7BQ9UGR2 993 aaKnown RBP6.7□□□□□ -1.34
PPP4R1-227ENST00000583988 ZNF252P-AS1Q0IIN9 211 aa6.69□□□□□ -1.34
PPP4R1-227ENST00000583988 TAF1CQ15572 869 aaPredicted RBP6.69□□□□□ -1.34
PPP4R1-227ENST00000583988 CYP27C1Q4G0S4 372 aa6.69□□□□□ -1.34
PPP4R1-227ENST00000583988 SV2BQ7L1I2 683 aa6.69□□□□□ -1.34
PPP4R1-227ENST00000583988 SAMM50Q9Y512 469 aa6.69□□□□□ -1.34
PPP4R1-227ENST00000583988 CSADQ9Y600 493 aa6.69□□□□□ -1.34
PPP4R1-227ENST00000583988 COL17A1Q9UMD9 1497 aaPredicted RBP6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 NEFMP07197 916 aa6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 BMP6P22004 513 aa6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 ST13P50502 369 aaKnown RBP6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 ZC3H12AQ5D1E8 599 aaKnown RBP6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 TP53INP2Q8IXH6 220 aa6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 ABI1Q8IZP0 508 aa6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 CRELD1Q96HD1 420 aa6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 PICK1Q9NRD5 415 aa6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 VTI1BQ9UEU0 232 aa6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 PCOLCE2Q9UKZ9 415 aa6.68□□□□□ -1.34
PPP4R1-227ENST00000583988 DCDC2CA8MYV0 355 aa6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 PRNPP04156 253 aa6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 CELA3AP09093 270 aa6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 TAL1P17542 331 aaPredicted RBP6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 MEI1Q5TIA1 1274 aa6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 RASIP1Q5U651 963 aa6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 VSIG10LQ86VR7 867 aa6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 FLCNQ8NFG4 579 aa6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 ISL2Q96A47 359 aa6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 MRRFQ96E11 262 aaKnown RBP6.67□□□□□ -1.34
PPP4R1-227ENST00000583988 LEFTY1O75610 366 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 ERVK-24P63145 666 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 PPM1JQ5JR12 505 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 LDLRAD1Q5T700 205 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 LLGL2Q6P1M3 1020 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 C12orf40Q86WS4 652 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 FAM181AQ8N9Y4 354 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 RNF214Q8ND24 703 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 FBXL18Q96ME1 805 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 NOC4LQ9BVI4 516 aaKnown RBP6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 PCDHA4Q9UN74 947 aa6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 TTF2Q9UNY4 1162 aaKnown RBP6.66□□□□□ -1.34
PPP4R1-227ENST00000583988 E9PSI1 815 aa6.65□□□□□ -1.34
PPP4R1-227ENST00000583988 LRRC14Q15048 493 aa6.65□□□□□ -1.34
PPP4R1-227ENST00000583988 CCDC85BQ15834 202 aaPredicted RBP6.65□□□□□ -1.34
PPP4R1-227ENST00000583988 PCNX4Q63HM2 1172 aa6.65□□□□□ -1.34
PPP4R1-227ENST00000583988 NFXL1Q6ZNB6 911 aa6.65□□□□□ -1.34
PPP4R1-227ENST00000583988 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
PPP4R1-227ENST00000583988 PAX4O43316 350 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms