RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 HIBADHP31937 336 aaKnown RBP8.13□□□□□ -1.11
NUP85-221ENST00000583548 TRIM32Q13049 653 aa8.13□□□□□ -1.11
NUP85-221ENST00000583548 PDE3AQ14432 1141 aa8.13□□□□□ -1.11
NUP85-221ENST00000583548 SCYL3Q8IZE3 742 aa8.13□□□□□ -1.11
NUP85-221ENST00000583548 RNPC3Q96LT9 517 aaKnown RBP8.13□□□□□ -1.11
NUP85-221ENST00000583548 NUDT12Q9BQG2 462 aa8.13□□□□□ -1.11
NUP85-221ENST00000583548 PHAXQ9H814 394 aaKnown RBP8.13□□□□□ -1.11
NUP85-221ENST00000583548 LAS1LQ9Y4W2 734 aaKnown RBP8.13□□□□□ -1.11
NUP85-221ENST00000583548 SNAP23O00161 211 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 DNM1LO00429 736 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 GPR37L1O60883 481 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 CSF1RP07333 972 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 MRE11P49959 708 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 RTP1P59025 263 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 LHX8Q68G74 356 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 PROCA1Q8NCQ7 364 aaPredicted RBP8.12□□□□□ -1.11
NUP85-221ENST00000583548 PPM1EQ8WY54 764 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 SPINK5Q9NQ38 1064 aaPredicted RBP8.12□□□□□ -1.11
NUP85-221ENST00000583548 MAP3K2Q9Y2U5 619 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 SUGT1Q9Y2Z0 365 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 AFG3L2Q9Y4W6 797 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 LTBP2Q14767 1821 aa8.12□□□□□ -1.11
NUP85-221ENST00000583548 MYBBP1AQ9BQG0 1328 aaKnown RBP8.11□□□□□ -1.11
NUP85-221ENST00000583548 H7C1W4 665 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 IGKV5-2P06315 115 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 PTPRAP18433 802 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 CYP2B6P20813 491 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 TMPOP42166 694 aaKnown RBP8.11□□□□□ -1.11
NUP85-221ENST00000583548 ATN1P54259 1190 aaPredicted RBP8.11□□□□□ -1.11
NUP85-221ENST00000583548 CACNB2Q08289 660 aaPredicted RBP8.11□□□□□ -1.11
NUP85-221ENST00000583548 IFIT5Q13325 482 aaKnown RBP8.11□□□□□ -1.11
NUP85-221ENST00000583548 UBE4AQ14139 1066 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 KSR2Q6VAB6 950 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 BADQ92934 168 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 TIFAQ96CG3 184 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 PRDM5Q9NQX1 630 aaPredicted RBP8.11□□□□□ -1.11
NUP85-221ENST00000583548 CXXC1Q9P0U4 656 aaPredicted RBP8.11□□□□□ -1.11
NUP85-221ENST00000583548 ATP11BQ9Y2G3 1177 aa8.11□□□□□ -1.11
NUP85-221ENST00000583548 NEURL1BA8MQ27 555 aa8.1□□□□□ -1.11
NUP85-221ENST00000583548 FRAT2O75474 233 aaPredicted RBP8.1□□□□□ -1.11
NUP85-221ENST00000583548 RGS2P41220 211 aa8.1□□□□□ -1.11
NUP85-221ENST00000583548 FOXK2Q01167 660 aa8.1□□□□□ -1.11
NUP85-221ENST00000583548 APOBEC3HQ6NTF7 200 aaKnown RBP8.1□□□□□ -1.11
NUP85-221ENST00000583548 POTEEQ6S8J3 1075 aa8.1□□□□□ -1.11
NUP85-221ENST00000583548 VPS37DQ86XT2 251 aa8.1□□□□□ -1.11
NUP85-221ENST00000583548 LPAR1Q92633 364 aa8.1□□□□□ -1.11
NUP85-221ENST00000583548 TBC1D2Q9BYX2 928 aa8.1□□□□□ -1.11
NUP85-221ENST00000583548 MYH16Q9H6N6 1097 aa8.1□□□□□ -1.11
NUP85-221ENST00000583548 MORF4L1Q9UBU8 362 aa8.1□□□□□ -1.11
NUP85-221ENST00000583548 LRRFIP2Q9Y608 721 aaKnown RBP8.1□□□□□ -1.11
NUP85-221ENST00000583548 TRIM75PA6NK02 468 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 CTNND1O60716 968 aaKnown RBP8.09□□□□□ -1.11
NUP85-221ENST00000583548 BMP1P13497 986 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 CCND3P30281 292 aaPredicted RBP8.09□□□□□ -1.11
NUP85-221ENST00000583548 MAPK4P31152 587 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 GCKRQ14397 625 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 TAF7LQ5H9L4 462 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 CCDC30Q5VVM6 783 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 MFSD14CQ5VZR4 134 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 POTEHQ6S545 545 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 LDHAL6AQ6ZMR3 332 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 CCAR1Q8IX12 1150 aaKnown RBP8.09□□□□□ -1.11
NUP85-221ENST00000583548 ARRDC4Q8NCT1 418 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 APBA2Q99767 749 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 KCNH6Q9H252 994 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 CNNM1Q9NRU3 951 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 TACC3Q9Y6A5 838 aa8.09□□□□□ -1.11
NUP85-221ENST00000583548 PI4KAP2A4QPH2 592 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 PHF20L1A8MW92 1017 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 KBTBD13C9JR72 458 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 PLIN1O60240 522 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 GYG1P46976 350 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 TCP10Q12799 353 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 CWF19L2Q2TBE0 894 aaKnown RBP8.08□□□□□ -1.12
NUP85-221ENST00000583548 CAVIN4Q5BKX8 364 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 C1orf53Q5VUE5 145 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 CCDC174Q6PII3 467 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 SLC39A5Q6ZMH5 540 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 PI4KAP1Q8N8J0 262 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 FAM84BQ96KN1 310 aaPredicted RBP8.08□□□□□ -1.12
NUP85-221ENST00000583548 PRDM12Q9H4Q4 367 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 EPHX3Q9H6B9 360 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 PDLIM7Q9NR12 457 aa8.08□□□□□ -1.12
NUP85-221ENST00000583548 DDX20Q9UHI6 824 aaKnown RBP8.08□□□□□ -1.12
NUP85-221ENST00000583548 UTYO14607 1347 aa8.07□□□□□ -1.12
NUP85-221ENST00000583548 GLRX3O76003 335 aaKnown RBP8.07□□□□□ -1.12
NUP85-221ENST00000583548 IGFBP4P22692 258 aa8.07□□□□□ -1.12
NUP85-221ENST00000583548 FPGSQ05932 587 aa8.07□□□□□ -1.12
NUP85-221ENST00000583548 CHAF1AQ13111 956 aaPredicted RBP8.07□□□□□ -1.12
NUP85-221ENST00000583548 SNX17Q15036 470 aa8.07□□□□□ -1.12
NUP85-221ENST00000583548 CCDC85BQ15834 202 aaPredicted RBP8.07□□□□□ -1.12
NUP85-221ENST00000583548 CCDC57Q2TAC2 916 aa8.07□□□□□ -1.12
NUP85-221ENST00000583548 TREML2Q5T2D2 321 aa8.07□□□□□ -1.12
NUP85-221ENST00000583548 GPRC5AQ8NFJ5 357 aa8.07□□□□□ -1.12
NUP85-221ENST00000583548 NECAB3Q96P71 396 aaPredicted RBP8.07□□□□□ -1.12
NUP85-221ENST00000583548 ASCC2Q9H1I8 757 aaPredicted RBP8.07□□□□□ -1.12
NUP85-221ENST00000583548 CHMP3Q9Y3E7 222 aa8.07□□□□□ -1.12
NUP85-221ENST00000583548 PIEZO1Q92508 2521 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms