RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
SMCHD1-205ENST00000581383 WDR18Q9BV38 432 aa7.84□□□□□ -1.15
SMCHD1-205ENST00000581383 ATXN3LQ9H3M9 355 aa7.84□□□□□ -1.15
SMCHD1-205ENST00000581383 CBX8Q9HC52 389 aa7.84□□□□□ -1.15
SMCHD1-205ENST00000581383 PICK1Q9NRD5 415 aa7.84□□□□□ -1.15
SMCHD1-205ENST00000581383 RNF19AQ9NV58 838 aa7.84□□□□□ -1.15
SMCHD1-205ENST00000581383 KIAA1522Q9P206 1035 aaPredicted RBP7.84□□□□□ -1.15
SMCHD1-205ENST00000581383 ID3Q02535 119 aa7.83□□□□□ -1.16
SMCHD1-205ENST00000581383 ALG1LQ6GMV1 187 aa7.83□□□□□ -1.16
SMCHD1-205ENST00000581383 PRPF40BQ6NWY9 871 aaKnown RBP7.83□□□□□ -1.16
SMCHD1-205ENST00000581383 ACSBG1Q96GR2 724 aa7.83□□□□□ -1.16
SMCHD1-205ENST00000581383 ACSS3Q9H6R3 686 aa7.83□□□□□ -1.16
SMCHD1-205ENST00000581383 TMEM39AQ9NV64 488 aa7.83□□□□□ -1.16
SMCHD1-205ENST00000581383 XPCQ01831 940 aaPredicted RBP7.82□□□□□ -1.16
SMCHD1-205ENST00000581383 ABI1Q8IZP0 508 aa7.82□□□□□ -1.16
SMCHD1-205ENST00000581383 AGBL5Q8NDL9 886 aa7.82□□□□□ -1.16
SMCHD1-205ENST00000581383 FAM161BQ96MY7 647 aa7.82□□□□□ -1.16
SMCHD1-205ENST00000581383 PARP2Q9UGN5 583 aa7.82□□□□□ -1.16
SMCHD1-205ENST00000581383 PPP1R9AQ9ULJ8 1098 aa7.82□□□□□ -1.16
SMCHD1-205ENST00000581383 GSTP1P09211 210 aaKnown RBP7.81□□□□□ -1.16
SMCHD1-205ENST00000581383 FGD1P98174 961 aa7.81□□□□□ -1.16
SMCHD1-205ENST00000581383 MSMPQ1L6U9 139 aa7.81□□□□□ -1.16
SMCHD1-205ENST00000581383 BCO2Q9BYV7 579 aa7.81□□□□□ -1.16
SMCHD1-205ENST00000581383 CCDC86Q9H6F5 360 aaKnown RBP7.81□□□□□ -1.16
SMCHD1-205ENST00000581383 XRCC5P13010 732 aaKnown RBP7.8□□□□□ -1.16
SMCHD1-205ENST00000581383 OGFOD3Q6PK18 319 aa7.8□□□□□ -1.16
SMCHD1-205ENST00000581383 SMYD4Q8IYR2 804 aaPredicted RBP7.8□□□□□ -1.16
SMCHD1-205ENST00000581383 ZC3H7BQ9UGR2 993 aaKnown RBP7.8□□□□□ -1.16
SMCHD1-205ENST00000581383 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 FAM87AP0C7U9 286 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 HCLS1P14317 486 aaPredicted RBP7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 FAAP100Q0VG06 881 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 CDK5R2Q13319 367 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 PI16Q6UXB8 463 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 SULF2Q8IWU5 870 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 WDR89Q96FK6 387 aaPredicted RBP7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 EMILIN2Q9BXX0 1053 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 BCL11AQ9H165 835 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 SLC5A6Q9Y289 635 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 SAMM50Q9Y512 469 aa7.79□□□□□ -1.16
SMCHD1-205ENST00000581383 DYNC1LI2O43237 492 aaPredicted RBP7.78□□□□□ -1.16
SMCHD1-205ENST00000581383 PSMD2Q13200 908 aa7.78□□□□□ -1.16
SMCHD1-205ENST00000581383 MAP1SQ66K74 1059 aaPredicted RBP7.78□□□□□ -1.16
SMCHD1-205ENST00000581383 NXPE4Q6UWF7 544 aa7.78□□□□□ -1.16
SMCHD1-205ENST00000581383 FBF1Q8TES7 1133 aa7.78□□□□□ -1.16
SMCHD1-205ENST00000581383 FANCD2OSQ96PS1 177 aa7.78□□□□□ -1.16
SMCHD1-205ENST00000581383 CRIM1Q9NZV1 1036 aa7.78□□□□□ -1.16
SMCHD1-205ENST00000581383 ADGRE2Q9UHX3 823 aa7.78□□□□□ -1.16
SMCHD1-205ENST00000581383 PRNPP04156 253 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 DAB2P98082 770 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 TTLL4Q14679 1199 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 PLCL1Q15111 1095 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 STK11IPQ8N1F8 1099 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 C1GALT1Q9NS00 363 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 KRT82Q9NSB4 513 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 PCOLCE2Q9UKZ9 415 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 SYNGAP1Q96PV0 1343 aa7.77□□□□□ -1.17
SMCHD1-205ENST00000581383 GNA15P30679 374 aa7.76□□□□□ -1.17
SMCHD1-205ENST00000581383 TMC4Q7Z404 712 aa7.76□□□□□ -1.17
SMCHD1-205ENST00000581383 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.76□□□□□ -1.17
SMCHD1-205ENST00000581383 GLIS3Q8NEA6 775 aa7.76□□□□□ -1.17
SMCHD1-205ENST00000581383 GATA6Q92908 595 aa7.76□□□□□ -1.17
SMCHD1-205ENST00000581383 ASIC4Q96FT7 647 aa7.76□□□□□ -1.17
SMCHD1-205ENST00000581383 ZNF862O60290 1169 aa7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 SORBS3O60504 671 aa7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 ARNTP27540 789 aa7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 MRPL58Q14197 206 aaKnown RBP7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 TSNAXIP1Q2TAA8 658 aa7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 KIF4BQ2VIQ3 1234 aa7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 TPTE2Q6XPS3 522 aa7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 GSX1Q9H4S2 264 aaPredicted RBP7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 VTI1BQ9UEU0 232 aa7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 SPG7Q9UQ90 795 aa7.75□□□□□ -1.17
SMCHD1-205ENST00000581383 VAMP1P23763 118 aa7.74□□□□□ -1.17
SMCHD1-205ENST00000581383 GSTT1P30711 240 aa7.74□□□□□ -1.17
SMCHD1-205ENST00000581383 CDC37L1Q7L3B6 337 aa7.74□□□□□ -1.17
SMCHD1-205ENST00000581383 NETO1Q8TDF5 533 aa7.74□□□□□ -1.17
SMCHD1-205ENST00000581383 BACH2Q9BYV9 841 aa7.74□□□□□ -1.17
SMCHD1-205ENST00000581383 CEP44Q9C0F1 390 aa7.74□□□□□ -1.17
SMCHD1-205ENST00000581383 DISC1Q9NRI5 854 aa7.74□□□□□ -1.17
SMCHD1-205ENST00000581383 AK5Q9Y6K8 562 aa7.74□□□□□ -1.17
SMCHD1-205ENST00000581383 NME2P22392 152 aa7.73□□□□□ -1.17
SMCHD1-205ENST00000581383 FAM181AQ8N9Y4 354 aa7.73□□□□□ -1.17
SMCHD1-205ENST00000581383 MISP3Q96FF7 219 aa7.73□□□□□ -1.17
SMCHD1-205ENST00000581383 OSBPL7Q9BZF2 842 aa7.73□□□□□ -1.17
SMCHD1-205ENST00000581383 CSADQ9Y600 493 aa7.73□□□□□ -1.17
SMCHD1-205ENST00000581383 BIN1O00499 593 aa7.72□□□□□ -1.17
SMCHD1-205ENST00000581383 SEZ6L2Q6UXD5 910 aa7.72□□□□□ -1.17
SMCHD1-205ENST00000581383 FRMD6Q96NE9 622 aa7.72□□□□□ -1.17
SMCHD1-205ENST00000581383 KRTAP4-11Q9BYQ6 195 aa7.72□□□□□ -1.17
SMCHD1-205ENST00000581383 PAK6Q9NQU5 681 aaPredicted RBP7.72□□□□□ -1.17
SMCHD1-205ENST00000581383 RECKO95980 971 aa7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 ITIH2P19823 946 aa7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 LMNB1P20700 586 aa7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 EIF4BP23588 611 aaKnown RBP7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 ITGAEP38570 1179 aa7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 BNIP3Q12983 259 aa7.71□□□□□ -1.18
SMCHD1-205ENST00000581383 ZNF574Q6ZN55 896 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms