RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
CCDC47-203ENST00000580986 RBM5P52756 815 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC47-203ENST00000580986 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
CCDC47-203ENST00000580986 GIMAP6Q6P9H5 292 aa12.5□□□□□ -0.41
CCDC47-203ENST00000580986 SAMD7Q7Z3H4 446 aa12.5□□□□□ -0.41
CCDC47-203ENST00000580986 FAM83AQ86UY5 434 aa12.5□□□□□ -0.41
CCDC47-203ENST00000580986 IFNL1Q8IU54 200 aa12.5□□□□□ -0.41
CCDC47-203ENST00000580986 AIDAQ96BJ3 306 aa12.5□□□□□ -0.41
CCDC47-203ENST00000580986 PUS7LQ9H0K6 701 aaKnown RBP12.5□□□□□ -0.41
CCDC47-203ENST00000580986 TAOK2Q9UL54 1235 aa12.5□□□□□ -0.41
CCDC47-203ENST00000580986 ZMYM6O95789 1325 aa12.5□□□□□ -0.41
CCDC47-203ENST00000580986 CCDC171Q6TFL3 1326 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 A0A0D9SFI3 127 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 SHTN1A0MZ66 631 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 SGSM2O43147 1006 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 GPAA1O43292 621 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 EGFRP00533 1210 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
CCDC47-203ENST00000580986 LCE2DQ5TA82 110 aaPredicted RBP12.49□□□□□ -0.41
CCDC47-203ENST00000580986 CDC42EP5Q6NZY7 148 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 APOBEC3FQ8IUX4 373 aaKnown RBP12.49□□□□□ -0.41
CCDC47-203ENST00000580986 TRPM4Q8TD43 1214 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 FAM227BQ96M60 508 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
CCDC47-203ENST00000580986 CRNKL1Q9BZJ0 848 aaKnown RBP12.49□□□□□ -0.41
CCDC47-203ENST00000580986 ATP8A2Q9NTI2 1148 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 AATFQ9NY61 560 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCDC47-203ENST00000580986 TMOD2Q9NZR1 351 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 PPP2R3BQ9Y5P8 575 aa12.49□□□□□ -0.41
CCDC47-203ENST00000580986 ATRNL1Q5VV63 1379 aa12.48□□□□□ -0.41
CCDC47-203ENST00000580986 ENTPD3O75355 529 aa12.48□□□□□ -0.41
CCDC47-203ENST00000580986 WDHD1O75717 1129 aaPredicted RBP12.48□□□□□ -0.41
CCDC47-203ENST00000580986 MBD4O95243 580 aa12.48□□□□□ -0.41
CCDC47-203ENST00000580986 CHGBP05060 677 aa12.48□□□□□ -0.41
CCDC47-203ENST00000580986 HIRAP54198 1017 aaPredicted RBP12.48□□□□□ -0.41
CCDC47-203ENST00000580986 NBPF9Q3BBW0 867 aa12.48□□□□□ -0.41
CCDC47-203ENST00000580986 TBC1D10BQ4KMP7 808 aaPredicted RBP12.48□□□□□ -0.41
CCDC47-203ENST00000580986 CWC27Q6UX04 472 aaKnown RBP12.48□□□□□ -0.41
CCDC47-203ENST00000580986 LDHDQ86WU2 507 aa12.48□□□□□ -0.41
CCDC47-203ENST00000580986 MIGA1Q8NAN2 632 aa12.48□□□□□ -0.41
CCDC47-203ENST00000580986 ZNF70Q9UC06 446 aaPredicted RBP12.48□□□□□ -0.41
CCDC47-203ENST00000580986 MKRN1Q9UHC7 482 aaKnown RBP12.48□□□□□ -0.41
CCDC47-203ENST00000580986 NAV1Q8NEY1 1877 aa12.48□□□□□ -0.41
CCDC47-203ENST00000580986 M0R2C6 588 aa12.47□□□□□ -0.41
CCDC47-203ENST00000580986 YY1P25490 414 aa12.47□□□□□ -0.41
CCDC47-203ENST00000580986 LCORLQ8N3X6 602 aa12.47□□□□□ -0.41
CCDC47-203ENST00000580986 ESYT1Q9BSJ8 1104 aa12.47□□□□□ -0.41
CCDC47-203ENST00000580986 DSCC1Q9BVC3 393 aa12.47□□□□□ -0.41
CCDC47-203ENST00000580986 TDRD3Q9H7E2 651 aaKnown RBP12.47□□□□□ -0.41
CCDC47-203ENST00000580986 RRAGCQ9HB90 399 aa12.47□□□□□ -0.41
CCDC47-203ENST00000580986 GPBP1L1Q9HC44 474 aaPredicted RBP12.47□□□□□ -0.41
CCDC47-203ENST00000580986 NMRK2Q9NPI5 230 aa12.47□□□□□ -0.41
CCDC47-203ENST00000580986 USP40Q9NVE5 1235 aa12.47□□□□□ -0.41
CCDC47-203ENST00000580986 FLT1P17948 1338 aa12.46□□□□□ -0.41
CCDC47-203ENST00000580986 PATL2C9JE40 543 aaKnown RBP12.46□□□□□ -0.41
CCDC47-203ENST00000580986 TNNI2P48788 182 aa12.46□□□□□ -0.41
CCDC47-203ENST00000580986 DYNLL1P63167 89 aaKnown RBP12.46□□□□□ -0.41
CCDC47-203ENST00000580986 ALX1Q15699 326 aa12.46□□□□□ -0.41
CCDC47-203ENST00000580986 SLFNL1Q499Z3 407 aa12.46□□□□□ -0.41
CCDC47-203ENST00000580986 ZNF589Q86UQ0 364 aaPredicted RBP12.46□□□□□ -0.41
CCDC47-203ENST00000580986 TEX11Q8IYF3 940 aa12.46□□□□□ -0.41
CCDC47-203ENST00000580986 SH3RF3Q8TEJ3 882 aaPredicted RBP12.46□□□□□ -0.41
CCDC47-203ENST00000580986 SEC62Q99442 399 aaKnown RBP12.46□□□□□ -0.41
CCDC47-203ENST00000580986 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.41
CCDC47-203ENST00000580986 DHX36Q9H2U1 1008 aaKnown RBP12.46□□□□□ -0.41
CCDC47-203ENST00000580986 ARMT1Q9H993 441 aa12.46□□□□□ -0.41
CCDC47-203ENST00000580986 GGA3Q9NZ52 723 aa12.46□□□□□ -0.41
CCDC47-203ENST00000580986 PCDHAC2Q9Y5I4 1007 aa12.46□□□□□ -0.41
CCDC47-203ENST00000580986 LAMB1P07942 1786 aa12.46□□□□□ -0.42
CCDC47-203ENST00000580986 RBM26Q5T8P6 1007 aaKnown RBP12.45□□□□□ -0.42
CCDC47-203ENST00000580986 ANGEL2Q5VTE6 544 aaKnown RBP12.45□□□□□ -0.42
CCDC47-203ENST00000580986 FAM151AQ8WW52 585 aa12.45□□□□□ -0.42
CCDC47-203ENST00000580986 DCPSQ96C86 337 aaKnown RBP12.45□□□□□ -0.42
CCDC47-203ENST00000580986 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
CCDC47-203ENST00000580986 OSBPL5Q9H0X9 879 aaPredicted RBP12.45□□□□□ -0.42
CCDC47-203ENST00000580986 DCP1AQ9NPI6 582 aaPredicted RBP12.45□□□□□ -0.42
CCDC47-203ENST00000580986 FAM198AQ9UFP1 575 aa12.45□□□□□ -0.42
CCDC47-203ENST00000580986 LAMA4Q16363 1823 aa12.45□□□□□ -0.42
CCDC47-203ENST00000580986 CNTNAP1P78357 1384 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 CLRN2A0PK11 232 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 GSG1L2A8MUP6 293 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 KIF3CO14782 793 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 FOXP2O15409 715 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 REC8O95072 547 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 HSPD1P10809 573 aaKnown RBP12.44□□□□□ -0.42
CCDC47-203ENST00000580986 SBK1Q52WX2 424 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 NACAP1Q9BZK3 213 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 IL25Q9H293 177 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 ARPP21Q9UBL0 812 aaPredicted RBP12.44□□□□□ -0.42
CCDC47-203ENST00000580986 SLC4A4Q9Y6R1 1079 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 MYH1P12882 1939 aa12.44□□□□□ -0.42
CCDC47-203ENST00000580986 ROBO3Q96MS0 1386 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 USP5P45974 858 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 NT5C2P49902 561 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 NFIAQ12857 509 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 C8orf34Q49A92 452 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 CDC37L1Q7L3B6 337 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 METTL16Q86W50 562 aaKnown RBP12.43□□□□□ -0.42
CCDC47-203ENST00000580986 SULF1Q8IWU6 871 aa12.43□□□□□ -0.42
CCDC47-203ENST00000580986 ZNF784Q8NCA9 323 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms