RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 CETN3O15182 167 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 TNFAIP3P21580 790 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 TMPOP42166 694 aaKnown RBP5.7□□□□□ -1.5
NF1-219ENST00000579081 RAB15P59190 212 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 UBLCP1Q8WVY7 318 aaPredicted RBP5.7□□□□□ -1.5
NF1-219ENST00000579081 ATP6V1E1P36543 226 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 VAV2P52735 878 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 DIXDC1Q155Q3 683 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 IFNL2Q8IZJ0 200 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 ZEB2O60315 1214 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 ATP11AP98196 1134 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 TAOK1Q7L7X3 1001 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 CCDC26Q8TAB7 109 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 KCNG4Q8TDN1 519 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 NLRP3Q96P20 1036 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 CCDC68Q9H2F9 335 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 GDPD2Q9HCC8 539 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 PARP3Q9Y6F1 533 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 ATP5J2-PTCD1G3V325 749 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 SPOPO43791 374 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 TSPY1Q01534 308 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 MRRFQ96E11 262 aaKnown RBP5.7□□□□□ -1.5
NF1-219ENST00000579081 SH2D4AQ9H788 454 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 TMOD4Q9NZQ9 345 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 MYO1AQ9UBC5 1043 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 MAP3K2Q9Y2U5 619 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 ARHGAP5Q13017 1502 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 ESYT2A0FGR8 921 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 PRR16Q569H4 304 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 HSP90AA4PQ58FG1 418 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 C3orf20Q8ND61 904 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 F6X3S4 739 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 ZNF853P0CG23 659 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 LMNB1P20700 586 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 CALML3P27482 149 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 ZNF365Q70YC5 407 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 FCHSD1Q86WN1 690 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 AFAP1Q8N556 730 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 ZNF280CQ8ND82 737 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 ANKRD24Q8TF21 1146 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 HVCN1Q96D96 273 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 DDX27Q96GQ7 796 aaKnown RBP5.7□□□□□ -1.5
NF1-219ENST00000579081 EYA3Q99504 573 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 TUBB6Q9BUF5 446 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 TRIM6Q9C030 488 aaPredicted RBP5.7□□□□□ -1.5
NF1-219ENST00000579081 SMIM24O75264 130 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 MRPS27Q92552 414 aaKnown RBP5.7□□□□□ -1.5
NF1-219ENST00000579081 SEPT8Q92599 483 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 BRF1Q92994 677 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 RIOK1Q9BRS2 568 aaKnown RBP5.7□□□□□ -1.5
NF1-219ENST00000579081 HAUS8Q9BT25 410 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 FRMD4BQ9Y2L6 1034 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 IVNS1ABPQ9Y6Y0 642 aa5.7□□□□□ -1.5
NF1-219ENST00000579081 TRIM75PA6NK02 468 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 M0QZ92 97 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 PPFIA4O75335 1185 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 RNF8O76064 485 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 ATP6V1AP38606 617 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 CDR2Q01850 454 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 STRN3Q13033 797 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 DCAF17Q5H9S7 520 aaPredicted RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 ZC3H12CQ9C0D7 883 aaKnown RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 IMPACTQ9P2X3 320 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 ANKRD50Q9ULJ7 1429 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 DTNBO60941 627 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 PLCG2P16885 1265 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 CAPN2P17655 700 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 PCK1P35558 622 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 INPP1P49441 399 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 SLC12A2P55011 1212 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 DYNC1I2Q13409 638 aaKnown RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 PDE1CQ14123 709 aaPredicted RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 ALDH1L2Q3SY69 923 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 MUM1L1Q5H9M0 696 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 GTF3C6Q969F1 213 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 PPANQ9NQ55 473 aaKnown RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 RTL9Q8NET4 1388 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 C9orf84Q5VXU9 1444 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 MAGEB6P1A0A0J9YX57 407 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 EPB41P11171 864 aaKnown RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 MAN1A1P33908 653 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 UBE2HP62256 183 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 UBXN1Q04323 297 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 SMYD5Q6GMV2 418 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 PHF8Q9UPP1 1060 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 SPDYE16A6NNV3 312 aaPredicted RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 SPDYE2Q495Y8 402 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 LGSNQ5TDP6 509 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 THUMPD2Q9BTF0 503 aaKnown RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 ZNF408Q9H9D4 720 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 GUCA1BQ9UMX6 200 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 CCDC169A6NNP5 214 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 DKC1O60832 514 aaKnown RBP eCLIP5.69□□□□□ -1.5
NF1-219ENST00000579081 SASH1O94885 1247 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 HSPA8P11142 646 aaKnown RBP5.69□□□□□ -1.5
NF1-219ENST00000579081 PLCB4Q15147 1175 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 TMCO5AQ8N6Q1 288 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 RUNDC3BQ96NL0 473 aa5.69□□□□□ -1.5
NF1-219ENST00000579081 PKD2L1Q9P0L9 805 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms