RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 NLRP12P59046 1061 aa15.66■□□□□ 0.1
NDEL1-204ENST00000578172 MYL5Q02045 173 aa15.66■□□□□ 0.1
NDEL1-204ENST00000578172 ARMCX5Q6P1M9 558 aa15.66■□□□□ 0.1
NDEL1-204ENST00000578172 CCDC66A2RUB6 948 aa15.66■□□□□ 0.1
NDEL1-204ENST00000578172 PRR29P0C7W0 189 aa15.66■□□□□ 0.1
NDEL1-204ENST00000578172 FAM208AQ9UK61 1670 aaKnown RBP15.66■□□□□ 0.1
NDEL1-204ENST00000578172 SHC4Q6S5L8 630 aa15.65■□□□□ 0.1
NDEL1-204ENST00000578172 SAMSN1Q9NSI8 373 aaKnown RBP15.65■□□□□ 0.1
NDEL1-204ENST00000578172 ATG3Q9NT62 314 aa15.65■□□□□ 0.1
NDEL1-204ENST00000578172 SEC31AO94979 1220 aaKnown RBP15.65■□□□□ 0.1
NDEL1-204ENST00000578172 MCM7P33993 719 aa15.65■□□□□ 0.1
NDEL1-204ENST00000578172 GSDMDP57764 484 aa15.65■□□□□ 0.1
NDEL1-204ENST00000578172 SAMD1Q6SPF0 538 aaPredicted RBP15.65■□□□□ 0.1
NDEL1-204ENST00000578172 BRAPQ7Z569 592 aa15.65■□□□□ 0.1
NDEL1-204ENST00000578172 SMAP1Q8IYB5 467 aaPredicted RBP15.65■□□□□ 0.1
NDEL1-204ENST00000578172 ENGASEQ8NFI3 743 aa15.65■□□□□ 0.1
NDEL1-204ENST00000578172 IRX2Q9BZI1 471 aaPredicted RBP15.65■□□□□ 0.1
NDEL1-204ENST00000578172 WDR17Q8IZU2 1322 aa15.65■□□□□ 0.1
NDEL1-204ENST00000578172 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.65■□□□□ 0.1
NDEL1-204ENST00000578172 PPP1R13BQ96KQ4 1090 aa15.65■□□□□ 0.1
NDEL1-204ENST00000578172 FMN2Q9NZ56 1722 aa15.64■□□□□ 0.1
NDEL1-204ENST00000578172 PCCAP05165 728 aaPredicted RBP15.64■□□□□ 0.09
NDEL1-204ENST00000578172 GIGYF2Q6Y7W6 1299 aaKnown RBP15.64■□□□□ 0.09
NDEL1-204ENST00000578172 MRFAP1L1Q96HT8 127 aa15.64■□□□□ 0.09
NDEL1-204ENST00000578172 NMT2O60551 498 aa15.64■□□□□ 0.09
NDEL1-204ENST00000578172 FBXO38Q6PIJ6 1188 aa15.64■□□□□ 0.09
NDEL1-204ENST00000578172 CCDC12Q8WUD4 166 aaPredicted RBP15.64■□□□□ 0.09
NDEL1-204ENST00000578172 HOOK1Q9UJC3 728 aaKnown RBP15.64■□□□□ 0.09
NDEL1-204ENST00000578172 SPATA31A3Q5VYP0 1347 aa15.64■□□□□ 0.09
NDEL1-204ENST00000578172 ZNF335Q9H4Z2 1342 aaPredicted RBP15.64■□□□□ 0.09
NDEL1-204ENST00000578172 CCZ1BP86790 482 aa15.64■□□□□ 0.09
NDEL1-204ENST00000578172 CCZ1P86791 482 aaPredicted RBP15.64■□□□□ 0.09
NDEL1-204ENST00000578172 PDE4CQ08493 712 aa15.64■□□□□ 0.09
NDEL1-204ENST00000578172 TTF1Q15361 905 aaPredicted RBP15.64■□□□□ 0.09
NDEL1-204ENST00000578172 KRI1Q8N9T8 703 aaKnown RBP15.64■□□□□ 0.09
NDEL1-204ENST00000578172 EPSTI1Q96J88 318 aa15.64■□□□□ 0.09
NDEL1-204ENST00000578172 PPFIBP1Q86W92 1011 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 RASGRP4Q8TDF6 673 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 AATFQ9NY61 560 aaKnown RBP eCLIP15.63■□□□□ 0.09
NDEL1-204ENST00000578172 ERVV-2B6SEH9 535 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 DNA2P51530 1060 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 NLRP5P59047 1200 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 PPARDQ03181 441 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 VPS16Q9H269 839 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.63■□□□□ 0.09
NDEL1-204ENST00000578172 MAP3K15Q6ZN16 1313 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 YEATS4O95619 227 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 PDE4BQ07343 736 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 SLC39A14Q15043 492 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 PUM3Q15397 648 aaKnown RBP15.63■□□□□ 0.09
NDEL1-204ENST00000578172 SUSD4Q5VX71 490 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 RGPD1P0DJD0 1748 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 NCAPD2Q15021 1401 aa15.63■□□□□ 0.09
NDEL1-204ENST00000578172 SH2B2O14492 632 aaPredicted RBP15.62■□□□□ 0.09
NDEL1-204ENST00000578172 PDE8AO60658 829 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 EVX2Q03828 476 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 LTN1O94822 1766 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 GTF2F1P35269 517 aaKnown RBP eCLIP15.62■□□□□ 0.09
NDEL1-204ENST00000578172 NOM1Q5C9Z4 860 aaKnown RBP15.62■□□□□ 0.09
NDEL1-204ENST00000578172 FKBP15Q5T1M5 1219 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 IFIT1BQ5T764 474 aaKnown RBP15.62■□□□□ 0.09
NDEL1-204ENST00000578172 E4F1Q66K89 784 aaPredicted RBP15.62■□□□□ 0.09
NDEL1-204ENST00000578172 CAVIN2O95810 425 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 CMA1P23946 247 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 ATP2B2Q01814 1243 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 MTF1Q14872 753 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 KMT5BQ4FZB7 885 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 AKNAD1Q5T1N1 836 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 STRBPQ96SI9 672 aaKnown RBP15.62■□□□□ 0.09
NDEL1-204ENST00000578172 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.62■□□□□ 0.09
NDEL1-204ENST00000578172 STX8Q9UNK0 236 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 FOXP2O15409 715 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 ISCA1Q9BUE6 129 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 CPVLQ9H3G5 476 aa15.62■□□□□ 0.09
NDEL1-204ENST00000578172 ZMYM6O95789 1325 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 CASQ1P31415 396 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 CCDC150Q8NCX0 1101 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 IL17RAQ96F46 866 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 EPB41L4AQ9HCS5 686 aaPredicted RBP15.61■□□□□ 0.09
NDEL1-204ENST00000578172 RIPOR2Q9Y4F9 1068 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 NEMFO60524 1076 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 XBP1P17861 261 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 ENOX2Q16206 610 aaKnown RBP15.61■□□□□ 0.09
NDEL1-204ENST00000578172 PIK3AP1Q6ZUJ8 805 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 CSRNP2Q9H175 543 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 POLR3EQ9NVU0 708 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 TSPY2A6NKD2 308 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 CBFA2T2O43439 604 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 POSTNQ15063 836 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 NBPF11Q86T75 865 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 NOSTRINQ8IVI9 506 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 ZNF654Q8IZM8 581 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 LPIN2Q92539 896 aa15.61■□□□□ 0.09
NDEL1-204ENST00000578172 GPR101Q96P66 508 aaPredicted RBP15.61■□□□□ 0.09
NDEL1-204ENST00000578172 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
NDEL1-204ENST00000578172 MAGEB6P1A0A0J9YX57 407 aa15.6■□□□□ 0.09
NDEL1-204ENST00000578172 PHACTR2O75167 634 aa15.6■□□□□ 0.09
NDEL1-204ENST00000578172 PALLDQ8WX93 1383 aa15.6■□□□□ 0.09
NDEL1-204ENST00000578172 USP17L12C9JPN9 530 aa15.6■□□□□ 0.09
NDEL1-204ENST00000578172 USP17L21D6R901 530 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms