RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MAIP1Q8WWC4 291 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 DCAF5Q96JK2 942 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 PHACTR3Q96KR7 559 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 MRVI1Q9Y6F6 885 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 CETN3O15182 167 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 IGSF3O75054 1194 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 MAGEA1P43355 309 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 MRPL12P52815 198 aaKnown RBP12.01□□□□□ -0.49
SEC22B-201ENST00000578049 HAUS4Q9H6D7 363 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 KIAA1468Q9P260 1216 aa12.01□□□□□ -0.49
SEC22B-201ENST00000578049 RASSF2P50749 326 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 TFCP2Q12800 502 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 WDR78Q5VTH9 848 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 TRIM58Q8NG06 486 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 GOLGA5Q8TBA6 731 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 RABGGTAQ92696 567 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 TNRQ92752 1358 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 EPB41P11171 864 aaKnown RBP12□□□□□ -0.49
SEC22B-201ENST00000578049 ZNF274Q96GC6 653 aaPredicted RBP12□□□□□ -0.49
SEC22B-201ENST00000578049 KCNK9Q9NPC2 374 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 VIMP08670 466 aaKnown RBP12□□□□□ -0.49
SEC22B-201ENST00000578049 POSTNQ15063 836 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 HAUS3Q68CZ6 603 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 KIFAP3Q92845 792 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 EDC4Q6P2E9 1401 aaKnown RBP12□□□□□ -0.49
SEC22B-201ENST00000578049 FLOT1O75955 427 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 TNNI3KQ59H18 835 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 FBXO31Q5XUX0 539 aaPredicted RBP12□□□□□ -0.49
SEC22B-201ENST00000578049 SMARCC2Q8TAQ2 1214 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 SEC62Q99442 399 aaKnown RBP12□□□□□ -0.49
SEC22B-201ENST00000578049 VCX3BQ9H321 246 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 MYO1AQ9UBC5 1043 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 FPGT-TNNI3KV9GXZ4 949 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 PZPP20742 1482 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 ZNF518AQ6AHZ1 1483 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 TRAF5O00463 557 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 FAM71BQ8TC56 605 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 SAR1BQ9Y6B6 198 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 ATP10BO94823 1461 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 GOLGA8KD6RF30 607 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 C6orf229H3BNL8 230 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 KIF3CO14782 793 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 MCM7P33993 719 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 PLCB3Q01970 1234 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 RAPGEF1Q13905 1077 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 INF2Q27J81 1249 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 TXNDC16Q9P2K2 825 aa12□□□□□ -0.49
SEC22B-201ENST00000578049 VWA3AA6NCI4 1184 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 ZCRB1Q8TBF4 217 aaKnown RBP11.99□□□□□ -0.49
SEC22B-201ENST00000578049 LZTS2Q9BRK4 669 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 SBNO2Q9Y2G9 1366 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 NEDD9Q14511 834 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 NLRP3Q96P20 1036 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 ANKRD2Q9GZV1 360 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 B4DLN1 442 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 PDE4DQ08499 809 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 ERCC6LQ2NKX8 1250 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 MAP7D1Q3KQU3 841 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 TDRD7Q8NHU6 1098 aaKnown RBP11.99□□□□□ -0.49
SEC22B-201ENST00000578049 A0A1W2PQ27 194 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 A0A1W2PQ64 194 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 A0A1W2PQD8 194 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 PABPN1LA6NDY0 278 aaKnown RBP11.99□□□□□ -0.49
SEC22B-201ENST00000578049 TCP1P17987 556 aaKnown RBP11.99□□□□□ -0.49
SEC22B-201ENST00000578049 CLNS1AP54105 237 aaKnown RBP11.99□□□□□ -0.49
SEC22B-201ENST00000578049 ARID5AQ03989 594 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 RAB17Q9H0T7 212 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 FRMD4BQ9Y2L6 1034 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 OR8K1Q8NGG5 319 aa11.99□□□□□ -0.49
SEC22B-201ENST00000578049 ERCC5P28715 1186 aaPredicted RBP11.98□□□□□ -0.49
SEC22B-201ENST00000578049 PCK1P35558 622 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 CCT6AP40227 531 aaKnown RBP11.98□□□□□ -0.49
SEC22B-201ENST00000578049 MYSM1Q5VVJ2 828 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 XPO4Q9C0E2 1151 aaKnown RBP11.98□□□□□ -0.49
SEC22B-201ENST00000578049 FAM184BQ9ULE4 1060 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 CTNND2Q9UQB3 1225 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 STX10O60499 249 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 GADD45BO75293 160 aaPredicted RBP11.98□□□□□ -0.49
SEC22B-201ENST00000578049 MAP2K2P36507 400 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 VPS16Q9H269 839 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 COMMD10Q9Y6G5 202 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 SLC8A1P32418 973 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 CCDC38Q502W7 563 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 ZNF804AQ7Z570 1209 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 ABCC2Q92887 1545 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 EEF2P13639 858 aaKnown RBP11.98□□□□□ -0.49
SEC22B-201ENST00000578049 KRT25Q7Z3Z0 450 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 SBNO1A3KN83 1393 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 CCDC160A6NGH7 325 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 TTC38Q5R3I4 469 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 PHLDB2Q86SQ0 1253 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 METTL22Q9BUU2 404 aaPredicted RBP11.98□□□□□ -0.49
SEC22B-201ENST00000578049 NYXQ9GZU5 481 aa11.98□□□□□ -0.49
SEC22B-201ENST00000578049 ZNF215Q9UL58 517 aaPredicted RBP11.98□□□□□ -0.49
SEC22B-201ENST00000578049 GNA14O95837 355 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 CMA1P23946 247 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 TNNI2P48788 182 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 KRT40Q6A162 431 aa11.97□□□□□ -0.49
SEC22B-201ENST00000578049 BICC1Q9H694 974 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms