RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 ABCB4P21439 1286 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 STAT3P40763 770 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 CCNFP41002 786 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 EIF6P56537 245 aaKnown RBP6.17□□□□□ -1.42
BRIP1-202ENST00000577598 IL2P60568 153 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 TBC1D8BQ0IIM8 1120 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 DDX10Q13206 875 aaKnown RBP6.17□□□□□ -1.42
BRIP1-202ENST00000577598 HEATR6Q6AI08 1181 aaKnown RBP6.17□□□□□ -1.42
BRIP1-202ENST00000577598 MMS22LQ6ZRQ5 1243 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 GRAMD1CQ8IYS0 662 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 ASAP3Q8TDY4 903 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 USP7Q93009 1102 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 JPH4Q96JJ6 628 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 ANLNQ9NQW6 1124 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 SAGE1Q9NXZ1 904 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 CABP1Q9NZU7 370 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 EXOC5O00471 708 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 MYCP01106 439 aaPredicted RBP6.17□□□□□ -1.42
BRIP1-202ENST00000577598 GFOD2Q3B7J2 385 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 SV2CQ496J9 727 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 IFIT1BQ5T764 474 aaKnown RBP6.17□□□□□ -1.42
BRIP1-202ENST00000577598 LMBR1LQ6UX01 489 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 MCM10Q7L590 875 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 CCDC74AQ96AQ1 378 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 CFHR5Q9BXR6 569 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 EFCC1Q9HA90 598 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 USP3Q9Y6I4 520 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 PQBP1O60828 265 aaKnown RBP6.17□□□□□ -1.42
BRIP1-202ENST00000577598 PTCD1O75127 700 aaKnown RBP6.17□□□□□ -1.42
BRIP1-202ENST00000577598 CENPCQ03188 943 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 LRMPQ12912 555 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 WAPLQ7Z5K2 1190 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 KIAA0907Q7Z7F0 614 aaPredicted RBP6.17□□□□□ -1.42
BRIP1-202ENST00000577598 PLEKHM2Q8IWE5 1019 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 CCDC33Q8N5R6 958 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 SAMD3Q8N6K7 520 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 CAAP1Q9H8G2 361 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 ZNF358Q9NW07 568 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 COQ3Q9NZJ6 369 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 GPN3Q9UHW5 284 aaPredicted RBP6.17□□□□□ -1.42
BRIP1-202ENST00000577598 ERBB4Q15303 1308 aa6.17□□□□□ -1.42
BRIP1-202ENST00000577598 ENPP3O14638 875 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 OSMP13725 252 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 PCSK2P16519 638 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 COPS2P61201 443 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 DSC3Q14574 896 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 STAT4Q14765 748 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 SART3Q15020 963 aaKnown RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 CIAPIN1Q6FI81 312 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 SAMD7Q7Z3H4 446 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 MYLK4Q86YV6 388 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 PASD1Q8IV76 773 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 TAB3Q8N5C8 712 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 PDCD7Q8N8D1 485 aaKnown RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 SLC26A6Q9BXS9 759 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.16□□□□□ -1.423e-6■□□□□ 9.6
BRIP1-202ENST00000577598 OBP2AQ9NY56 170 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 POLR2BP30876 1174 aaKnown RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 PTGER2P43116 358 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 KIAA0753Q2KHM9 967 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 GPATCH4Q5T3I0 446 aaKnown RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 SLC9A9Q8IVB4 645 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 CSRNP1Q96S65 589 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 ANAPC4Q9UJX5 808 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 M0R2C6 588 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 CCT2P78371 535 aaKnown RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 PCBP1Q15365 356 aaKnown RBP eCLIP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 RPGRQ92834 1020 aaKnown RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 SH3GLB2Q9NR46 395 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 TMPRSS4Q9NRS4 437 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 BMP2KQ9NSY1 1161 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 LRFN1Q9P244 771 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 PRKAG3Q9UGI9 489 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 AXIN2Q9Y2T1 843 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 TTC36A6NLP5 189 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 PABPC4Q13310 644 aaKnown RBP eCLIP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 NBPF20Q3BBV1 942 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 ACBD5Q5T8D3 534 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 CCSAPQ6IQ19 270 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 DDX46Q7L014 1031 aaKnown RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 RETREG3Q86VR2 466 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 TREML1Q86YW5 311 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 SPATA5Q8NB90 893 aa6.16□□□□□ -1.42
BRIP1-202ENST00000577598 ACSF2Q96CM8 615 aaPredicted RBP6.16□□□□□ -1.42
BRIP1-202ENST00000577598 RRN3P2A6NIE6 340 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 KLF4O43474 513 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 CPP00450 1065 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 STT3AP46977 705 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 PLA2G4AP47712 749 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 PTK2Q05397 1052 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 USP4Q13107 963 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 PDE1CQ14123 709 aaPredicted RBP6.15□□□□□ -1.42
BRIP1-202ENST00000577598 PRPF40BQ6NWY9 871 aaKnown RBP6.15□□□□□ -1.42
BRIP1-202ENST00000577598 ZNF438Q7Z4V0 828 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 TRIM52Q96A61 297 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 PPP2R3BQ9Y5P8 575 aa6.15□□□□□ -1.42
BRIP1-202ENST00000577598 H2AFYO75367 372 aaKnown RBP6.15□□□□□ -1.43
BRIP1-202ENST00000577598 POLBP06746 335 aa6.15□□□□□ -1.43
BRIP1-202ENST00000577598 FOXB2Q5VYV0 432 aa6.15□□□□□ -1.43
BRIP1-202ENST00000577598 SLC22A25Q6T423 547 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms