RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 KAZALD1Q96I82 304 aa11.76□□□□□ -0.53
NPLOC4-210ENST00000572824 ZNF804BA4D1E1 1349 aa11.76□□□□□ -0.53
NPLOC4-210ENST00000572824 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
NPLOC4-210ENST00000572824 WNT10BO00744 389 aa11.75□□□□□ -0.53
NPLOC4-210ENST00000572824 MAP2K2P36507 400 aa11.75□□□□□ -0.53
NPLOC4-210ENST00000572824 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
NPLOC4-210ENST00000572824 ZNF157P51786 506 aaPredicted RBP11.75□□□□□ -0.53
NPLOC4-210ENST00000572824 HHIPL1Q96JK4 782 aa11.75□□□□□ -0.53
NPLOC4-210ENST00000572824 MCOLN1Q9GZU1 580 aa11.75□□□□□ -0.53
NPLOC4-210ENST00000572824 ZNF521Q96K83 1311 aa11.75□□□□□ -0.53
NPLOC4-210ENST00000572824 F8W031 263 aaPredicted RBP11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 UBE2Q2LH0YL09 131 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 COPS2P61201 443 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 GTF2IP78347 998 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 PRKG1Q13976 671 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 TMEM259Q4ZIN3 620 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 BRICD5Q6PL45 260 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 LMBR1LQ6UX01 489 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 WDR63Q8IWG1 891 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 THAP11Q96EK4 314 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 SUCLG2Q96I99 432 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 PUS3Q9BZE2 481 aaKnown RBP11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 MYH13Q9UKX3 1938 aa11.74□□□□□ -0.53
NPLOC4-210ENST00000572824 PLIN1O60240 522 aa11.73□□□□□ -0.53
NPLOC4-210ENST00000572824 HSP90B1P14625 803 aaKnown RBP11.73□□□□□ -0.53
NPLOC4-210ENST00000572824 NOGQ13253 232 aa11.73□□□□□ -0.53
NPLOC4-210ENST00000572824 SLC4A10Q6U841 1118 aa11.73□□□□□ -0.53
NPLOC4-210ENST00000572824 C2orf69Q8N8R5 385 aa11.73□□□□□ -0.53
NPLOC4-210ENST00000572824 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
NPLOC4-210ENST00000572824 HCSTQ9UBK5 93 aa11.73□□□□□ -0.53
NPLOC4-210ENST00000572824 LAMB1P07942 1786 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 ANKRD18BA2A2Z9 1011 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 CCDC85CA6NKD9 419 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 TRPA1O75762 1119 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 NBPF7P0C2Y1 421 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 GRIK5Q16478 980 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 RETREG3Q86VR2 466 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 ZBED3Q96IU2 234 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 CSRNP1Q96S65 589 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 MPHOSPH8Q99549 860 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 MTRQ99707 1265 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 COA1Q9GZY4 146 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 CD209Q9NNX6 404 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 RNF186Q9NXI6 227 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 LEMD3Q9Y2U8 911 aa11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 TNRC18O15417 2968 aaPredicted RBP11.72□□□□□ -0.53
NPLOC4-210ENST00000572824 GRM8O00222 908 aa11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 KCNJ4P48050 445 aa11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 DGKZQ13574 1117 aa11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 STRIP1Q5VSL9 837 aa11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 TTLL5Q6EMB2 1281 aa11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 KLHDC4Q8TBB5 520 aa11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 R3HDMLQ9H3Y0 253 aa11.71□□□□□ -0.53
NPLOC4-210ENST00000572824 ZSWIM8A7E2V4 1837 aa11.71□□□□□ -0.54
NPLOC4-210ENST00000572824 PITPNM2Q9BZ72 1349 aa11.7□□□□□ -0.54
NPLOC4-210ENST00000572824 CLRN2A0PK11 232 aa11.7□□□□□ -0.54
NPLOC4-210ENST00000572824 CFAP99D6REC4 459 aa11.7□□□□□ -0.54
NPLOC4-210ENST00000572824 GYG1P46976 350 aa11.7□□□□□ -0.54
NPLOC4-210ENST00000572824 IFIT5Q13325 482 aaKnown RBP11.7□□□□□ -0.54
NPLOC4-210ENST00000572824 ANKRD44Q8N8A2 993 aa11.7□□□□□ -0.54
NPLOC4-210ENST00000572824 IQSEC3Q9UPP2 1182 aaPredicted RBP11.7□□□□□ -0.54
NPLOC4-210ENST00000572824 MMRN1Q13201 1228 aa11.69□□□□□ -0.54
NPLOC4-210ENST00000572824 LRRC24Q50LG9 513 aa11.69□□□□□ -0.54
NPLOC4-210ENST00000572824 PRR7Q8TB68 274 aa11.69□□□□□ -0.54
NPLOC4-210ENST00000572824 CLMNQ96JQ2 1002 aa11.69□□□□□ -0.54
NPLOC4-210ENST00000572824 USB1Q9BQ65 265 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-210ENST00000572824 ANKRD2Q9GZV1 360 aa11.69□□□□□ -0.54
NPLOC4-210ENST00000572824 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
NPLOC4-210ENST00000572824 COL1A1P02452 1464 aaPredicted RBP11.69□□□□□ -0.54
NPLOC4-210ENST00000572824 HTTP42858 3142 aa11.69□□□□□ -0.54
NPLOC4-210ENST00000572824 PDE4DIPQ5VU43 2346 aa11.68□□□□□ -0.54
NPLOC4-210ENST00000572824 AP1G2O75843 785 aa11.68□□□□□ -0.54
NPLOC4-210ENST00000572824 TBC1D8O95759 1140 aa11.68□□□□□ -0.54
NPLOC4-210ENST00000572824 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
NPLOC4-210ENST00000572824 SSH1Q8WYL5 1049 aa11.68□□□□□ -0.54
NPLOC4-210ENST00000572824 ZNF516Q92618 1163 aa11.68□□□□□ -0.54
NPLOC4-210ENST00000572824 SRCIN1Q9C0H9 1055 aa11.68□□□□□ -0.54
NPLOC4-210ENST00000572824 IL21Q9HBE4 155 aa11.68□□□□□ -0.54
NPLOC4-210ENST00000572824 IL1R1P14778 569 aa11.67□□□□□ -0.54
NPLOC4-210ENST00000572824 ZEB1P37275 1124 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-210ENST00000572824 SOX10P56693 466 aa11.67□□□□□ -0.54
NPLOC4-210ENST00000572824 CFAP100Q494V2 611 aa11.67□□□□□ -0.54
NPLOC4-210ENST00000572824 LDHAL6AQ6ZMR3 332 aa11.67□□□□□ -0.54
NPLOC4-210ENST00000572824 PRMT6Q96LA8 375 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-210ENST00000572824 CHMP4AQ9BY43 222 aa11.67□□□□□ -0.54
NPLOC4-210ENST00000572824 CNNM1Q9NRU3 951 aa11.67□□□□□ -0.54
NPLOC4-210ENST00000572824 C9orf78Q9NZ63 289 aaPredicted RBP11.67□□□□□ -0.54
NPLOC4-210ENST00000572824 MYO3BQ8WXR4 1341 aa11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 CA12O43570 354 aa11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 MCM6Q14566 821 aa11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 C15orf52Q6ZUT6 534 aaKnown RBP11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 ERICH6Q7L0X2 663 aa11.66□□□□□ -0.54
NPLOC4-210ENST00000572824 OGFOD1Q8N543 542 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms