RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 CCER1Q8TC90 406 aaPredicted RBP7.64□□□□□ -1.19
KARSP3-201ENST00000571212 EPS8L3Q8TE67 593 aaKnown RBP7.64□□□□□ -1.19
KARSP3-201ENST00000571212 TRIM56Q9BRZ2 755 aaKnown RBP7.64□□□□□ -1.19
KARSP3-201ENST00000571212 ZNF576Q9H609 170 aa7.64□□□□□ -1.19
KARSP3-201ENST00000571212 HIF3AQ9Y2N7 669 aa7.64□□□□□ -1.19
KARSP3-201ENST00000571212 REREQ9P2R6 1566 aa7.64□□□□□ -1.19
KARSP3-201ENST00000571212 ARHGAP35Q9NRY4 1499 aa7.64□□□□□ -1.19
KARSP3-201ENST00000571212 SOWAHDA6NJG2 315 aa7.63□□□□□ -1.19
KARSP3-201ENST00000571212 CEBPAP49715 358 aaPredicted RBP7.63□□□□□ -1.19
KARSP3-201ENST00000571212 SOX4Q06945 474 aaPredicted RBP7.63□□□□□ -1.19
KARSP3-201ENST00000571212 POU4F3Q15319 338 aa7.63□□□□□ -1.19
KARSP3-201ENST00000571212 CITED4Q96RK1 184 aa7.63□□□□□ -1.19
KARSP3-201ENST00000571212 ARHGAP5Q13017 1502 aa7.63□□□□□ -1.19
KARSP3-201ENST00000571212 LRRIQ1Q96JM4 1722 aa7.63□□□□□ -1.19
KARSP3-201ENST00000571212 CDC42BPBQ9Y5S2 1711 aa7.63□□□□□ -1.19
KARSP3-201ENST00000571212 CLIP1P30622 1438 aa7.63□□□□□ -1.19
KARSP3-201ENST00000571212 DIP2CQ9Y2E4 1556 aa7.63□□□□□ -1.19
KARSP3-201ENST00000571212 GADD45BO75293 160 aaPredicted RBP7.62□□□□□ -1.19
KARSP3-201ENST00000571212 USP11P51784 963 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 ZNF157P51786 506 aaPredicted RBP7.62□□□□□ -1.19
KARSP3-201ENST00000571212 NFKBIBQ15653 356 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 AFAP1Q8N556 730 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 ABCB6Q9NP58 842 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 UHRF1BP1Q6BDS2 1440 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 C3P01024 1663 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 MLH3Q9UHC1 1453 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 KIAA1324LA8MWY0 1029 aaPredicted RBP7.62□□□□□ -1.19
KARSP3-201ENST00000571212 B3GALT4O96024 378 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 ITPKAP23677 461 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 HOXA10P31260 410 aaPredicted RBP7.62□□□□□ -1.19
KARSP3-201ENST00000571212 PI16Q6UXB8 463 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 CSRNP1Q96S65 589 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 ABCA6Q8N139 1617 aa7.62□□□□□ -1.19
KARSP3-201ENST00000571212 AGLP35573 1532 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 PREX2Q70Z35 1606 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 FAM95CA0A1B0GW59 222 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 CYP11A1P05108 521 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 F13BP05160 661 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 ADH5P11766 374 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 AKAP4Q5JQC9 854 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 GLIS3Q8NEA6 775 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 BIN2Q9UBW5 565 aaPredicted RBP7.61□□□□□ -1.19
KARSP3-201ENST00000571212 ACTL7BQ9Y614 415 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 PTPRTO14522 1441 aa7.61□□□□□ -1.19
KARSP3-201ENST00000571212 ADMP35318 185 aa7.6□□□□□ -1.19
KARSP3-201ENST00000571212 GRM2Q14416 872 aa7.6□□□□□ -1.19
KARSP3-201ENST00000571212 TMC7Q7Z402 723 aa7.6□□□□□ -1.19
KARSP3-201ENST00000571212 RBCK1Q9BYM8 510 aa7.6□□□□□ -1.19
KARSP3-201ENST00000571212 DNAJC25Q9H1X3 360 aa7.6□□□□□ -1.19
KARSP3-201ENST00000571212 ITSN2Q9NZM3 1697 aa7.6□□□□□ -1.19
KARSP3-201ENST00000571212 ABCC1P33527 1531 aa7.6□□□□□ -1.19
KARSP3-201ENST00000571212 TMEM238LA0A1B0GVL6 79 aa7.59□□□□□ -1.19
KARSP3-201ENST00000571212 PDE4CQ08493 712 aa7.59□□□□□ -1.19
KARSP3-201ENST00000571212 FAAP100Q0VG06 881 aa7.59□□□□□ -1.19
KARSP3-201ENST00000571212 DYMQ7RTS9 669 aa7.59□□□□□ -1.19
KARSP3-201ENST00000571212 CORO1BQ9BR76 489 aa7.59□□□□□ -1.19
KARSP3-201ENST00000571212 RAD18Q9NS91 495 aa7.59□□□□□ -1.19
KARSP3-201ENST00000571212 KIDINS220Q9ULH0 1771 aa7.59□□□□□ -1.19
KARSP3-201ENST00000571212 CNTLNQ9NXG0 1405 aa7.59□□□□□ -1.2
KARSP3-201ENST00000571212 TRAPPC8Q9Y2L5 1435 aa7.59□□□□□ -1.2
KARSP3-201ENST00000571212 NFICP08651 508 aa7.58□□□□□ -1.2
KARSP3-201ENST00000571212 SPINK2P20155 84 aa7.58□□□□□ -1.2
KARSP3-201ENST00000571212 RAB6AP20340 208 aa7.58□□□□□ -1.2
KARSP3-201ENST00000571212 GRIK1P39086 918 aa7.58□□□□□ -1.2
KARSP3-201ENST00000571212 DMRTB1Q96MA1 342 aa7.58□□□□□ -1.2
KARSP3-201ENST00000571212 KRTAP9-2Q9BYQ4 174 aa7.58□□□□□ -1.2
KARSP3-201ENST00000571212 ZC3H12CQ9C0D7 883 aaKnown RBP7.58□□□□□ -1.2
KARSP3-201ENST00000571212 OAS3Q9Y6K5 1087 aaKnown RBP7.58□□□□□ -1.2
KARSP3-201ENST00000571212 CDC42BPAQ5VT25 1732 aa7.58□□□□□ -1.2
KARSP3-201ENST00000571212 CCDC18Q5T9S5 1454 aa7.58□□□□□ -1.2
KARSP3-201ENST00000571212 PRPF40BQ6NWY9 871 aaKnown RBP7.57□□□□□ -1.2
KARSP3-201ENST00000571212 INTS5Q6P9B9 1019 aaKnown RBP7.57□□□□□ -1.2
KARSP3-201ENST00000571212 PAOXQ6QHF9 649 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 ALKBH8Q96BT7 664 aaKnown RBP7.57□□□□□ -1.2
KARSP3-201ENST00000571212 FAM105AQ9NUU6 356 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 AP4E1Q9UPM8 1137 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 MROH2AA6NES4 1674 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 CASKIN1Q8WXD9 1431 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 IQSEC2Q5JU85 1478 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 DISP3Q9P2K9 1392 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
KARSP3-201ENST00000571212 GP2P55259 537 aaKnown RBP7.57□□□□□ -1.2
KARSP3-201ENST00000571212 FCGRTP55899 365 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 PDE3AQ14432 1141 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 DTX1Q86Y01 620 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 EZH1Q92800 747 aaPredicted RBP7.57□□□□□ -1.2
KARSP3-201ENST00000571212 WDR89Q96FK6 387 aaPredicted RBP7.57□□□□□ -1.2
KARSP3-201ENST00000571212 TBC1D32Q96NH3 1257 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 ATG3Q9NT62 314 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 PIM2Q9P1W9 311 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 PRKAG2Q9UGJ0 569 aa7.57□□□□□ -1.2
KARSP3-201ENST00000571212 GNEQ9Y223 722 aaKnown RBP7.57□□□□□ -1.2
KARSP3-201ENST00000571212 LTBP4Q8N2S1 1624 aa7.56□□□□□ -1.2
KARSP3-201ENST00000571212 AOC2O75106 756 aa7.56□□□□□ -1.2
KARSP3-201ENST00000571212 LIG1P18858 919 aa7.56□□□□□ -1.2
KARSP3-201ENST00000571212 WDR18Q9BV38 432 aa7.56□□□□□ -1.2
KARSP3-201ENST00000571212 OSBPL1AQ9BXW6 950 aa7.56□□□□□ -1.2
KARSP3-201ENST00000571212 DCTN4Q9UJW0 460 aa7.56□□□□□ -1.2
KARSP3-201ENST00000571212 PPP1R9AQ9ULJ8 1098 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms