RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SCYL3Q8IZE3 742 aa22.9■■□□□ 1.26
LINC01238-205ENST00000567549 SPATA5Q8NB90 893 aa22.9■■□□□ 1.26
LINC01238-205ENST00000567549 TNRC18O15417 2968 aaPredicted RBP22.9■■□□□ 1.26
LINC01238-205ENST00000567549 PDHXO00330 501 aa22.89■■□□□ 1.25
LINC01238-205ENST00000567549 CLUAP1Q96AJ1 413 aa22.89■■□□□ 1.25
LINC01238-205ENST00000567549 GPR108Q9NPR9 543 aa22.89■■□□□ 1.25
LINC01238-205ENST00000567549 GPR75-ASB3A0A0A6YYF3 556 aa22.88■■□□□ 1.25
LINC01238-205ENST00000567549 CTNND1O60716 968 aaKnown RBP22.88■■□□□ 1.25
LINC01238-205ENST00000567549 BCAR3O75815 825 aa22.88■■□□□ 1.25
LINC01238-205ENST00000567549 ARID4AP29374 1257 aaPredicted RBP22.88■■□□□ 1.25
LINC01238-205ENST00000567549 MECOMQ03112 1051 aa22.88■■□□□ 1.25
LINC01238-205ENST00000567549 CCDC158Q5M9N0 1113 aa22.88■■□□□ 1.25
LINC01238-205ENST00000567549 RAI14Q9P0K7 980 aa22.88■■□□□ 1.25
LINC01238-205ENST00000567549 PLCG2P16885 1265 aa22.87■■□□□ 1.25
LINC01238-205ENST00000567549 ZNF333Q96JL9 665 aa22.87■■□□□ 1.25
LINC01238-205ENST00000567549 TBC1D2Q9BYX2 928 aa22.87■■□□□ 1.25
LINC01238-205ENST00000567549 LRP2BPQ9P2M1 347 aa22.87■■□□□ 1.25
LINC01238-205ENST00000567549 PTCH2Q9Y6C5 1203 aa22.87■■□□□ 1.25
LINC01238-205ENST00000567549 TBC1D12O60347 775 aa22.86■■□□□ 1.25
LINC01238-205ENST00000567549 BAG3O95817 575 aa22.86■■□□□ 1.25
LINC01238-205ENST00000567549 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
LINC01238-205ENST00000567549 MAP3K10Q02779 954 aa22.86■■□□□ 1.25
LINC01238-205ENST00000567549 PICALMQ13492 652 aa22.86■■□□□ 1.25
LINC01238-205ENST00000567549 SLC4A8Q2Y0W8 1093 aa22.86■■□□□ 1.25
LINC01238-205ENST00000567549 C17orf99Q6UX52 265 aa22.86■■□□□ 1.25
LINC01238-205ENST00000567549 HMG20BQ9P0W2 317 aa22.86■■□□□ 1.25
LINC01238-205ENST00000567549 SLC45A1Q9Y2W3 748 aa22.86■■□□□ 1.25
LINC01238-205ENST00000567549 RFX7Q2KHR2 1363 aa22.86■■□□□ 1.25
LINC01238-205ENST00000567549 KIAA0100Q14667 2235 aaKnown RBP22.85■■□□□ 1.25
LINC01238-205ENST00000567549 TTC39AQ5SRH9 613 aa22.85■■□□□ 1.25
LINC01238-205ENST00000567549 ZHX2Q9Y6X8 837 aa22.85■■□□□ 1.25
LINC01238-205ENST00000567549 ATRNL1Q5VV63 1379 aa22.85■■□□□ 1.25
LINC01238-205ENST00000567549 COL2A1P02458 1487 aaPredicted RBP22.85■■□□□ 1.25
LINC01238-205ENST00000567549 DOCK1Q14185 1865 aa22.84■■□□□ 1.25
LINC01238-205ENST00000567549 PNMA6EA0A0J9YXQ4 647 aa22.84■■□□□ 1.25
LINC01238-205ENST00000567549 PTPRAP18433 802 aa22.84■■□□□ 1.25
LINC01238-205ENST00000567549 TMEM57Q8N5G2 664 aa22.84■■□□□ 1.25
LINC01238-205ENST00000567549 A0A0G2JLL6 359 aaPredicted RBP22.83■■□□□ 1.25
LINC01238-205ENST00000567549 PHF20L1A8MW92 1017 aa22.83■■□□□ 1.25
LINC01238-205ENST00000567549 FMNL1O95466 1100 aaPredicted RBP22.83■■□□□ 1.25
LINC01238-205ENST00000567549 PSMC4P43686 418 aa22.83■■□□□ 1.25
LINC01238-205ENST00000567549 PRRT2Q7Z6L0 340 aaPredicted RBP22.83■■□□□ 1.25
LINC01238-205ENST00000567549 RAET1EQ8TD07 263 aa22.83■■□□□ 1.25
LINC01238-205ENST00000567549 NSUN4Q96CB9 384 aaKnown RBP22.83■■□□□ 1.25
LINC01238-205ENST00000567549 OSBPL5Q9H0X9 879 aaPredicted RBP22.83■■□□□ 1.25
LINC01238-205ENST00000567549 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.83■■□□□ 1.25
LINC01238-205ENST00000567549 CPA4Q9UI42 421 aa22.83■■□□□ 1.25
LINC01238-205ENST00000567549 PNMA3Q9UL41 463 aa22.83■■□□□ 1.25
LINC01238-205ENST00000567549 POTEFA5A3E0 1075 aa22.82■■□□□ 1.24
LINC01238-205ENST00000567549 MS4A1P11836 297 aa22.82■■□□□ 1.24
LINC01238-205ENST00000567549 FCGRTP55899 365 aa22.82■■□□□ 1.24
LINC01238-205ENST00000567549 ATP8B2P98198 1209 aa22.82■■□□□ 1.24
LINC01238-205ENST00000567549 CERS3Q8IU89 383 aa22.82■■□□□ 1.24
LINC01238-205ENST00000567549 ITPRIPQ8IWB1 547 aa22.82■■□□□ 1.24
LINC01238-205ENST00000567549 ZFPM1Q8IX07 1006 aa22.82■■□□□ 1.24
LINC01238-205ENST00000567549 NKX2-3Q8TAU0 364 aa22.82■■□□□ 1.24
LINC01238-205ENST00000567549 DHX36Q9H2U1 1008 aaKnown RBP22.82■■□□□ 1.24
LINC01238-205ENST00000567549 SRRDQ9UH36 339 aa22.82■■□□□ 1.24
LINC01238-205ENST00000567549 DDTLA6NHG4 134 aaPredicted RBP22.81■■□□□ 1.24
LINC01238-205ENST00000567549 SURF6O75683 361 aaKnown RBP22.81■■□□□ 1.24
LINC01238-205ENST00000567549 POLA2Q14181 598 aa22.81■■□□□ 1.24
LINC01238-205ENST00000567549 TNNI3KQ59H18 835 aa22.81■■□□□ 1.24
LINC01238-205ENST00000567549 GADL1Q6ZQY3 521 aa22.81■■□□□ 1.24
LINC01238-205ENST00000567549 SSH3Q8TE77 659 aa22.81■■□□□ 1.24
LINC01238-205ENST00000567549 SMCR8Q8TEV9 937 aaPredicted RBP22.81■■□□□ 1.24
LINC01238-205ENST00000567549 HERC5Q9UII4 1024 aaKnown RBP22.81■■□□□ 1.24
LINC01238-205ENST00000567549 AFG3L2Q9Y4W6 797 aa22.81■■□□□ 1.24
LINC01238-205ENST00000567549 FPGT-TNNI3KV9GXZ4 949 aa22.81■■□□□ 1.24
LINC01238-205ENST00000567549 RHBDL3P58872 404 aa22.8■■□□□ 1.24
LINC01238-205ENST00000567549 PABPC4Q13310 644 aaKnown RBP eCLIP22.8■■□□□ 1.24
LINC01238-205ENST00000567549 NAA16Q6N069 864 aaPredicted RBP22.8■■□□□ 1.24
LINC01238-205ENST00000567549 TMED8Q6PL24 325 aaPredicted RBP22.8■■□□□ 1.24
LINC01238-205ENST00000567549 TEX11Q8IYF3 940 aa22.8■■□□□ 1.24
LINC01238-205ENST00000567549 ZNF512BQ96KM6 892 aaPredicted RBP22.8■■□□□ 1.24
LINC01238-205ENST00000567549 TRIM47Q96LD4 638 aa22.8■■□□□ 1.24
LINC01238-205ENST00000567549 DDX4Q9NQI0 724 aaKnown RBP22.8■■□□□ 1.24
LINC01238-205ENST00000567549 MAST2Q6P0Q8 1798 aa22.79■■□□□ 1.24
LINC01238-205ENST00000567549 HTTP42858 3142 aa22.79■■□□□ 1.24
LINC01238-205ENST00000567549 MCAMP43121 646 aa22.79■■□□□ 1.24
LINC01238-205ENST00000567549 UBXN2AP68543 259 aa22.79■■□□□ 1.24
LINC01238-205ENST00000567549 TRIM34Q9BYJ4 488 aa22.79■■□□□ 1.24
LINC01238-205ENST00000567549 AS3MTQ9HBK9 375 aa22.79■■□□□ 1.24
LINC01238-205ENST00000567549 ADGRA2Q96PE1 1338 aa22.79■■□□□ 1.24
LINC01238-205ENST00000567549 CAPN2P17655 700 aa22.78■■□□□ 1.24
LINC01238-205ENST00000567549 MOGSQ13724 837 aa22.78■■□□□ 1.24
LINC01238-205ENST00000567549 SH3BP5LQ7L8J4 393 aa22.78■■□□□ 1.24
LINC01238-205ENST00000567549 ERC1Q8IUD2 1116 aa22.78■■□□□ 1.24
LINC01238-205ENST00000567549 PROCA1Q8NCQ7 364 aaPredicted RBP22.78■■□□□ 1.24
LINC01238-205ENST00000567549 ARHGAP39Q9C0H5 1083 aa22.78■■□□□ 1.24
LINC01238-205ENST00000567549 MYPNQ86TC9 1320 aa22.78■■□□□ 1.24
LINC01238-205ENST00000567549 TRIM75PA6NK02 468 aa22.77■■□□□ 1.24
LINC01238-205ENST00000567549 EN2P19622 333 aaPredicted RBP22.77■■□□□ 1.24
LINC01238-205ENST00000567549 GRK4P32298 578 aa22.77■■□□□ 1.24
LINC01238-205ENST00000567549 HSP90AB4PQ58FF6 505 aa22.77■■□□□ 1.24
LINC01238-205ENST00000567549 GPAT2Q6NUI2 795 aa22.77■■□□□ 1.24
LINC01238-205ENST00000567549 TBC1D9Q6ZT07 1266 aa22.77■■□□□ 1.24
LINC01238-205ENST00000567549 PI4KBQ9UBF8 816 aa22.77■■□□□ 1.24
LINC01238-205ENST00000567549 AGTPBP1Q9UPW5 1226 aa22.77■■□□□ 1.24
LINC01238-205ENST00000567549 BCRP11274 1271 aa22.76■■□□□ 1.23
LINC01238-205ENST00000567549 OSBPP22059 807 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms