RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 FKTNO75072 461 aa18■□□□□ 0.47
FANCA-220ENST00000566409 CCL15Q16663 113 aa18■□□□□ 0.47
FANCA-220ENST00000566409 CCDC158Q5M9N0 1113 aa18■□□□□ 0.47
FANCA-220ENST00000566409 TTC39AQ5SRH9 613 aa18■□□□□ 0.47
FANCA-220ENST00000566409 C20orf194Q5TEA3 1177 aa18■□□□□ 0.47
FANCA-220ENST00000566409 RAI14Q9P0K7 980 aa18■□□□□ 0.47
FANCA-220ENST00000566409 CDK5RAP2Q96SN8 1893 aa17.99■□□□□ 0.47
FANCA-220ENST00000566409 PHF20L1A8MW92 1017 aa17.99■□□□□ 0.47
FANCA-220ENST00000566409 GTF2A2P52657 109 aa17.99■□□□□ 0.47
FANCA-220ENST00000566409 MAP3K10Q02779 954 aa17.99■□□□□ 0.47
FANCA-220ENST00000566409 FAM43AQ8N2R8 423 aa17.99■□□□□ 0.47
FANCA-220ENST00000566409 LRP2BPQ9P2M1 347 aa17.99■□□□□ 0.47
FANCA-220ENST00000566409 MAST2Q6P0Q8 1798 aa17.99■□□□□ 0.47
FANCA-220ENST00000566409 ZAP70P43403 619 aa17.98■□□□□ 0.47
FANCA-220ENST00000566409 GSTO1P78417 241 aa17.98■□□□□ 0.47
FANCA-220ENST00000566409 CAP1Q01518 475 aa17.98■□□□□ 0.47
FANCA-220ENST00000566409 PPIL2Q13356 520 aa17.98■□□□□ 0.47
FANCA-220ENST00000566409 PICALMQ13492 652 aa17.98■□□□□ 0.47
FANCA-220ENST00000566409 OTUD7BQ6GQQ9 843 aa17.98■□□□□ 0.47
FANCA-220ENST00000566409 DDX19BQ9UMR2 479 aa17.98■□□□□ 0.47
FANCA-220ENST00000566409 CENPFP49454 3210 aa17.97■□□□□ 0.47
FANCA-220ENST00000566409 NPM3O75607 178 aaKnown RBP17.97■□□□□ 0.47
FANCA-220ENST00000566409 LDHCP07864 332 aa17.97■□□□□ 0.47
FANCA-220ENST00000566409 PPATQ06203 517 aa17.97■□□□□ 0.47
FANCA-220ENST00000566409 NOL9Q5SY16 702 aaKnown RBP17.97■□□□□ 0.47
FANCA-220ENST00000566409 ADGRA1Q86SQ6 560 aa17.97■□□□□ 0.47
FANCA-220ENST00000566409 PIH1D3Q9NQM4 214 aaKnown RBP17.97■□□□□ 0.47
FANCA-220ENST00000566409 RPAP2Q8IXW5 612 aaPredicted RBP17.96■□□□□ 0.47
FANCA-220ENST00000566409 RHPN1Q8TCX5 695 aa17.96■□□□□ 0.47
FANCA-220ENST00000566409 IL1RAPL2Q9NP60 686 aa17.96■□□□□ 0.47
FANCA-220ENST00000566409 NDUFB9Q9Y6M9 179 aa17.96■□□□□ 0.47
FANCA-220ENST00000566409 TNRC18O15417 2968 aaPredicted RBP17.96■□□□□ 0.47
FANCA-220ENST00000566409 PHIPQ8WWQ0 1821 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 CETPP11597 493 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 RGS19P49795 217 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 SNAPC2Q13487 334 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 MOGSQ13724 837 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 AACSQ86V21 672 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 ERC1Q8IUD2 1116 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 ZSCAN29Q8IWY8 852 aaPredicted RBP17.95■□□□□ 0.46
FANCA-220ENST00000566409 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.95■□□□□ 0.46
FANCA-220ENST00000566409 SH3RF3Q8TEJ3 882 aaPredicted RBP17.95■□□□□ 0.46
FANCA-220ENST00000566409 HPS5Q9UPZ3 1129 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 KCNH4Q9UQ05 1017 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 FOCADQ5VW36 1801 aa17.95■□□□□ 0.46
FANCA-220ENST00000566409 SIPA1L1O43166 1804 aa17.94■□□□□ 0.46
FANCA-220ENST00000566409 BTBD19C9JJ37 291 aa17.94■□□□□ 0.46
FANCA-220ENST00000566409 MAP4K4O95819 1239 aaPredicted RBP17.94■□□□□ 0.46
FANCA-220ENST00000566409 PDE3AQ14432 1141 aa17.94■□□□□ 0.46
FANCA-220ENST00000566409 PKN2Q16513 984 aaKnown RBP17.94■□□□□ 0.46
FANCA-220ENST00000566409 NAA16Q6N069 864 aaPredicted RBP17.94■□□□□ 0.46
FANCA-220ENST00000566409 PTPRFP10586 1907 aa17.94■□□□□ 0.46
FANCA-220ENST00000566409 DOCK1Q14185 1865 aa17.93■□□□□ 0.46
FANCA-220ENST00000566409 PPP4CP60510 307 aa17.93■□□□□ 0.46
FANCA-220ENST00000566409 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
FANCA-220ENST00000566409 OTOP1Q7RTM1 612 aa17.93■□□□□ 0.46
FANCA-220ENST00000566409 TEX11Q8IYF3 940 aa17.93■□□□□ 0.46
FANCA-220ENST00000566409 CD99L2Q8TCZ2 262 aa17.93■□□□□ 0.46
FANCA-220ENST00000566409 OSBPL5Q9H0X9 879 aaPredicted RBP17.93■□□□□ 0.46
FANCA-220ENST00000566409 ANTXR1Q9H6X2 564 aa17.93■□□□□ 0.46
FANCA-220ENST00000566409 AATFQ9NY61 560 aaKnown RBP eCLIP17.93■□□□□ 0.46
FANCA-220ENST00000566409 FAM196BA6NMK8 535 aa17.92■□□□□ 0.46
FANCA-220ENST00000566409 APBB1O00213 710 aa17.92■□□□□ 0.46
FANCA-220ENST00000566409 SP3Q02447 781 aa17.92■□□□□ 0.46
FANCA-220ENST00000566409 HSP90AB4PQ58FF6 505 aa17.92■□□□□ 0.46
FANCA-220ENST00000566409 FBXO46Q6PJ61 603 aaPredicted RBP17.92■□□□□ 0.46
FANCA-220ENST00000566409 SCYL3Q8IZE3 742 aa17.92■□□□□ 0.46
FANCA-220ENST00000566409 ZFYVE28Q9HCC9 887 aa17.92■□□□□ 0.46
FANCA-220ENST00000566409 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.92■□□□□ 0.46
FANCA-220ENST00000566409 ZSWIM8A7E2V4 1837 aa17.92■□□□□ 0.46
FANCA-220ENST00000566409 COL2A1P02458 1487 aaPredicted RBP17.92■□□□□ 0.46
FANCA-220ENST00000566409 TBC1D12O60347 775 aa17.91■□□□□ 0.46
FANCA-220ENST00000566409 PTPRAP18433 802 aa17.91■□□□□ 0.46
FANCA-220ENST00000566409 ZCCHC17Q9NP64 241 aaKnown RBP17.91■□□□□ 0.46
FANCA-220ENST00000566409 TRIM17Q9Y577 477 aa17.91■□□□□ 0.46
FANCA-220ENST00000566409 ATAD5Q96QE3 1844 aa17.91■□□□□ 0.46
FANCA-220ENST00000566409 CTNND1O60716 968 aaKnown RBP17.9■□□□□ 0.46
FANCA-220ENST00000566409 HMMRO75330 724 aa17.9■□□□□ 0.46
FANCA-220ENST00000566409 BAG3O95817 575 aa17.9■□□□□ 0.46
FANCA-220ENST00000566409 DYNLL1P63167 89 aaKnown RBP17.9■□□□□ 0.46
FANCA-220ENST00000566409 RRP1BQ14684 758 aaKnown RBP17.9■□□□□ 0.46
FANCA-220ENST00000566409 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
FANCA-220ENST00000566409 ERO1AQ96HE7 468 aa17.9■□□□□ 0.46
FANCA-220ENST00000566409 AFG3L2Q9Y4W6 797 aa17.9■□□□□ 0.46
FANCA-220ENST00000566409 ZHX2Q9Y6X8 837 aa17.9■□□□□ 0.46
FANCA-220ENST00000566409 TLR2O60603 784 aa17.89■□□□□ 0.45
FANCA-220ENST00000566409 IGSF3O75054 1194 aa17.89■□□□□ 0.45
FANCA-220ENST00000566409 IDH1O75874 414 aaKnown RBP17.89■□□□□ 0.45
FANCA-220ENST00000566409 SOX10P56693 466 aa17.89■□□□□ 0.45
FANCA-220ENST00000566409 GPAT2Q6NUI2 795 aa17.89■□□□□ 0.45
FANCA-220ENST00000566409 ANKRD23Q86SG2 305 aa17.89■□□□□ 0.45
FANCA-220ENST00000566409 CCDC84Q86UT8 332 aaPredicted RBP17.89■□□□□ 0.45
FANCA-220ENST00000566409 TGFBRAP1Q8WUH2 860 aa17.89■□□□□ 0.45
FANCA-220ENST00000566409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.89■□□□□ 0.45
FANCA-220ENST00000566409 PDHXO00330 501 aa17.88■□□□□ 0.45
FANCA-220ENST00000566409 CXCL11O14625 94 aa17.88■□□□□ 0.45
FANCA-220ENST00000566409 CYP7A1P22680 504 aa17.88■□□□□ 0.45
FANCA-220ENST00000566409 MAPKAPK5Q8IW41 473 aa17.88■□□□□ 0.45
FANCA-220ENST00000566409 CLASRPQ8N2M8 674 aaKnown RBP17.88■□□□□ 0.45
FANCA-220ENST00000566409 MAGEB6Q8N7X4 407 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms