RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 TGFBRAP1Q8WUH2 860 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 NACAP1Q9BZK3 213 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 RRAGCQ9HB90 399 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 VEZTQ9HBM0 779 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 ANO2Q9NQ90 1003 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 GGA3Q9NZ52 723 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 ZMYM6O95789 1325 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 FLT1P17948 1338 aa17.7■□□□□ 0.42
SPG7-213ENST00000566221 GSG1L2A8MUP6 293 aa17.69■□□□□ 0.42
SPG7-213ENST00000566221 PATL2C9JE40 543 aaKnown RBP17.69■□□□□ 0.42
SPG7-213ENST00000566221 PRKAB2O43741 272 aa17.69■□□□□ 0.42
SPG7-213ENST00000566221 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
SPG7-213ENST00000566221 CACNB3P54284 484 aa17.69■□□□□ 0.42
SPG7-213ENST00000566221 EAPPQ56P03 285 aaPredicted RBP17.69■□□□□ 0.42
SPG7-213ENST00000566221 ZC3H15Q8WU90 426 aaKnown RBP17.69■□□□□ 0.42
SPG7-213ENST00000566221 SDR42E1Q8WUS8 393 aa17.69■□□□□ 0.42
SPG7-213ENST00000566221 FOXP2O15409 715 aa17.68■□□□□ 0.42
SPG7-213ENST00000566221 ENTPD3O75355 529 aa17.68■□□□□ 0.42
SPG7-213ENST00000566221 APPP05067 770 aa17.68■□□□□ 0.42
SPG7-213ENST00000566221 HSPA1AP0DMV8 641 aaKnown RBP17.68■□□□□ 0.42
SPG7-213ENST00000566221 HSPA1BP0DMV9 641 aaKnown RBP17.68■□□□□ 0.42
SPG7-213ENST00000566221 TNNI2P48788 182 aa17.68■□□□□ 0.42
SPG7-213ENST00000566221 NFIAQ12857 509 aa17.68■□□□□ 0.42
SPG7-213ENST00000566221 PICALMQ13492 652 aa17.68■□□□□ 0.42
SPG7-213ENST00000566221 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
SPG7-213ENST00000566221 ANGEL2Q5VTE6 544 aaKnown RBP17.68■□□□□ 0.42
SPG7-213ENST00000566221 MAPKAPK5Q8IW41 473 aa17.68■□□□□ 0.42
SPG7-213ENST00000566221 LSG1Q9H089 658 aaKnown RBP17.68■□□□□ 0.42
SPG7-213ENST00000566221 EPB41L4AQ9HCS5 686 aaPredicted RBP17.68■□□□□ 0.42
SPG7-213ENST00000566221 DCP1AQ9NPI6 582 aaPredicted RBP17.68■□□□□ 0.42
SPG7-213ENST00000566221 DDX4Q9NQI0 724 aaKnown RBP17.68■□□□□ 0.42
SPG7-213ENST00000566221 FAM198AQ9UFP1 575 aa17.68■□□□□ 0.42
SPG7-213ENST00000566221 ASTN2O75129 1339 aaPredicted RBP17.68■□□□□ 0.42
SPG7-213ENST00000566221 TCP10L2B9ZVM9 353 aa17.67■□□□□ 0.42
SPG7-213ENST00000566221 EPB41L2O43491 1005 aaKnown RBP17.67■□□□□ 0.42
SPG7-213ENST00000566221 SLC34A2O95436 690 aa17.67■□□□□ 0.42
SPG7-213ENST00000566221 TDO2P48775 406 aa17.67■□□□□ 0.42
SPG7-213ENST00000566221 ALX1Q15699 326 aa17.67■□□□□ 0.42
SPG7-213ENST00000566221 FAM83AQ86UY5 434 aa17.67■□□□□ 0.42
SPG7-213ENST00000566221 OSBPL5Q9H0X9 879 aaPredicted RBP17.67■□□□□ 0.42
SPG7-213ENST00000566221 NAPBQ9H115 298 aa17.67■□□□□ 0.42
SPG7-213ENST00000566221 MKRN1Q9UHC7 482 aaKnown RBP17.67■□□□□ 0.42
SPG7-213ENST00000566221 TRPM7Q96QT4 1865 aa17.67■□□□□ 0.42
SPG7-213ENST00000566221 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
SPG7-213ENST00000566221 ATRNL1Q5VV63 1379 aa17.66■□□□□ 0.42
SPG7-213ENST00000566221 PTH1RQ03431 593 aa17.66■□□□□ 0.42
SPG7-213ENST00000566221 AMOTL1Q8IY63 956 aa17.66■□□□□ 0.42
SPG7-213ENST00000566221 IFNL3Q8IZI9 196 aa17.66■□□□□ 0.42
SPG7-213ENST00000566221 DCPSQ96C86 337 aaKnown RBP17.66■□□□□ 0.42
SPG7-213ENST00000566221 ARPP21Q9UBL0 812 aaPredicted RBP17.66■□□□□ 0.42
SPG7-213ENST00000566221 PGAP2Q9UHJ9 254 aa17.66■□□□□ 0.42
SPG7-213ENST00000566221 U3KPZ7 1027 aaPredicted RBP17.66■□□□□ 0.42
SPG7-213ENST00000566221 TCP10Q12799 353 aa17.65■□□□□ 0.42
SPG7-213ENST00000566221 LDHDQ86WU2 507 aa17.65■□□□□ 0.42
SPG7-213ENST00000566221 FAM151AQ8WW52 585 aa17.65■□□□□ 0.42
SPG7-213ENST00000566221 MAP4K1Q92918 833 aa17.65■□□□□ 0.42
SPG7-213ENST00000566221 MCM9Q9NXL9 1143 aa17.65■□□□□ 0.42
SPG7-213ENST00000566221 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
SPG7-213ENST00000566221 PPP2R3BQ9Y5P8 575 aa17.65■□□□□ 0.42
SPG7-213ENST00000566221 SULF1Q8IWU6 871 aa17.64■□□□□ 0.41
SPG7-213ENST00000566221 BACH2Q9BYV9 841 aa17.64■□□□□ 0.41
SPG7-213ENST00000566221 DHX36Q9H2U1 1008 aaKnown RBP17.64■□□□□ 0.41
SPG7-213ENST00000566221 SAP30BPQ9UHR5 308 aaKnown RBP17.64■□□□□ 0.41
SPG7-213ENST00000566221 RBM8AQ9Y5S9 174 aaKnown RBP17.64■□□□□ 0.41
SPG7-213ENST00000566221 ATAD5Q96QE3 1844 aa17.63■□□□□ 0.41
SPG7-213ENST00000566221 FGAP02671 866 aa17.63■□□□□ 0.41
SPG7-213ENST00000566221 RASA3Q14644 834 aa17.63■□□□□ 0.41
SPG7-213ENST00000566221 SBK1Q52WX2 424 aa17.63■□□□□ 0.41
SPG7-213ENST00000566221 DEFB129Q9H1M3 183 aa17.63■□□□□ 0.41
SPG7-213ENST00000566221 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
SPG7-213ENST00000566221 ROBO3Q96MS0 1386 aa17.63■□□□□ 0.41
SPG7-213ENST00000566221 USP17L12C9JPN9 530 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 USP17L21D6R901 530 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 SEC24BO95487 1268 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 POLR3DP05423 398 aaPredicted RBP17.62■□□□□ 0.41
SPG7-213ENST00000566221 HLA-DOAP06340 250 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 POTEIP0CG38 1075 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 POTEJP0CG39 1038 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 CTR9Q6PD62 1173 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 KRT26Q7Z3Y9 468 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 TTC6Q86TZ1 520 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 ZSCAN29Q8IWY8 852 aaPredicted RBP17.62■□□□□ 0.41
SPG7-213ENST00000566221 SMC1BQ8NDV3 1235 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 TMEM39BQ9GZU3 492 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 PALD1Q9ULE6 856 aa17.62■□□□□ 0.41
SPG7-213ENST00000566221 IMMTQ16891 758 aaKnown RBP17.61■□□□□ 0.41
SPG7-213ENST00000566221 C12orf60Q5U649 245 aa17.61■□□□□ 0.41
SPG7-213ENST00000566221 ZFPM1Q8IX07 1006 aa17.61■□□□□ 0.41
SPG7-213ENST00000566221 USP26Q9BXU7 913 aa17.61■□□□□ 0.41
SPG7-213ENST00000566221 UPF2Q9HAU5 1272 aaKnown RBP17.61■□□□□ 0.41
SPG7-213ENST00000566221 OTOFQ9HC10 1997 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 PCNTO95613 3336 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 DDTLA6NHG4 134 aaPredicted RBP17.6■□□□□ 0.41
SPG7-213ENST00000566221 MCCP23508 829 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 PPARAQ07869 468 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 RNF20Q5VTR2 975 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 CDC37L1Q7L3B6 337 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 SH3BP5LQ7L8J4 393 aa17.6■□□□□ 0.41
SPG7-213ENST00000566221 HOOK2Q96ED9 719 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms