RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 MAP3K12Q12852 859 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 STK3Q13188 491 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 TOB2Q14106 344 aaPredicted RBP7.4□□□□□ -1.22
CHD9-217ENST00000565832 PROX2Q3B8N5 592 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 TSGA10IPQ3SY00 556 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 BLOC1S2Q6QNY1 142 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 NEK1Q96PY6 1258 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 STRBPQ96SI9 672 aaKnown RBP7.4□□□□□ -1.22
CHD9-217ENST00000565832 KCNK17Q96T54 332 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 TM6SF1Q9BZW5 370 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 PNMA3Q9UL41 463 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 LIMCH1Q9UPQ0 1083 aa7.4□□□□□ -1.22
CHD9-217ENST00000565832 RPAP1Q9BWH6 1393 aaPredicted RBP7.4□□□□□ -1.22
CHD9-217ENST00000565832 RFX7Q2KHR2 1363 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 MBD4O95243 580 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 ST3GAL1Q11201 340 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 CUL4AQ13619 759 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 RAB3GAP1Q15042 981 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 UBE3CQ15386 1083 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 SLC15A2Q16348 729 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 GRIK5Q16478 980 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 FOXD4L6Q3SYB3 417 aaPredicted RBP7.4□□□□□ -1.23
CHD9-217ENST00000565832 FOXD4L3Q6VB84 417 aaPredicted RBP7.4□□□□□ -1.23
CHD9-217ENST00000565832 CCDC83Q8IWF9 413 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 TATDN2Q93075 761 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 ANKRD2Q9GZV1 360 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 NBPF3Q9H094 633 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 RAI14Q9P0K7 980 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 POLLQ9UGP5 575 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 IRS2Q9Y4H2 1338 aa7.4□□□□□ -1.23
CHD9-217ENST00000565832 A0A1B0GUL6 1792 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 SMAPO00193 183 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 CYP7A1P22680 504 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 PSMA5P28066 241 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 PRDX5P30044 214 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 MCM2P49736 904 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 CLK2P49760 499 aaKnown RBP7.39□□□□□ -1.23
CHD9-217ENST00000565832 Q6ZUG5 572 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 LCORLQ8N3X6 602 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 AIDAQ96BJ3 306 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 RBM17Q96I25 401 aaKnown RBP7.39□□□□□ -1.23
CHD9-217ENST00000565832 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.39□□□□□ -1.23
CHD9-217ENST00000565832 TACC3Q9Y6A5 838 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 KLRG2A4D1S0 409 aaPredicted RBP7.39□□□□□ -1.23
CHD9-217ENST00000565832 SRGNP10124 158 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 DYNLL1P63167 89 aaKnown RBP7.39□□□□□ -1.23
CHD9-217ENST00000565832 MCM6Q14566 821 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 LRRFIP1Q32MZ4 808 aaKnown RBP7.39□□□□□ -1.23
CHD9-217ENST00000565832 ZSCAN25Q6NSZ9 544 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 PACS2Q86VP3 889 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 HOMEZQ8IX15 550 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 SDR42E1Q8WUS8 393 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 BRIP1Q9BX63 1249 aa7.39□□□□□ -1.23
CHD9-217ENST00000565832 GNL3LQ9NVN8 582 aaKnown RBP7.39□□□□□ -1.23
CHD9-217ENST00000565832 ARAP2Q8WZ64 1704 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 MYH13Q9UKX3 1938 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 DDX11L8A8MPP1 907 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 GSG1L2A8MUP6 293 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 ZNF213O14771 459 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 UFL1O94874 794 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 CD46P15529 392 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 DNAJB2P25686 324 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 CHRNA5P30532 468 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 HOXA10P31260 410 aaPredicted RBP7.38□□□□□ -1.23
CHD9-217ENST00000565832 MCM4P33991 863 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 EXOSC10Q01780 885 aaKnown RBP7.38□□□□□ -1.23
CHD9-217ENST00000565832 MECOMQ03112 1051 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 CTDSPL2Q05D32 466 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 BRF1Q92994 677 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 ZNF622Q969S3 477 aaKnown RBP eCLIP7.38□□□□□ -1.231e-9■□□□□ 8.3
CHD9-217ENST00000565832 EPB41L4AQ9HCS5 686 aaPredicted RBP7.38□□□□□ -1.23
CHD9-217ENST00000565832 PARP3Q9Y6F1 533 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 LAMA4Q16363 1823 aa7.38□□□□□ -1.23
CHD9-217ENST00000565832 TNS1Q9HBL0 1735 aaKnown RBP7.38□□□□□ -1.23
CHD9-217ENST00000565832 PATL2C9JE40 543 aaKnown RBP7.37□□□□□ -1.23
CHD9-217ENST00000565832 C6orf229H3BNL8 230 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 BBOX1O75936 387 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 APOBRQ0VD83 1088 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 IMMTQ16891 758 aaKnown RBP7.37□□□□□ -1.23
CHD9-217ENST00000565832 DHX32Q7L7V1 743 aaKnown RBP7.37□□□□□ -1.23
CHD9-217ENST00000565832 RAB11FIP4Q86YS3 637 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 TBC1D10CQ8IV04 446 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 IFNL3Q8IZI9 196 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 ANKRD31Q8N7Z5 1873 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 TBC1D16Q8TBP0 767 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 SPIRE2Q8WWL2 714 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 OTUD5Q96G74 571 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 TMEM134Q9H6X4 195 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 CWC22Q9HCG8 908 aaKnown RBP7.37□□□□□ -1.23
CHD9-217ENST00000565832 SLC4A4Q9Y6R1 1079 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 XDHP47989 1333 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 CYP2D7A0A087X1C5 515 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 FGD1P98174 961 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 KRT32Q14532 448 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 SLC4A8Q2Y0W8 1093 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 TICAM2Q86XR7 235 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 NSUN4Q96CB9 384 aaKnown RBP7.37□□□□□ -1.23
CHD9-217ENST00000565832 INTS4Q96HW7 963 aaKnown RBP7.37□□□□□ -1.23
CHD9-217ENST00000565832 SENP2Q9HC62 589 aa7.37□□□□□ -1.23
CHD9-217ENST00000565832 LIMD1Q9UGP4 676 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms