RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 LAMB1P07942 1786 aa22.72■■□□□ 1.23
PKD1-230ENST00000565639 KDM4AO75164 1064 aa22.72■■□□□ 1.23
PKD1-230ENST00000565639 STK3Q13188 491 aa22.72■■□□□ 1.23
PKD1-230ENST00000565639 DACT2Q5SW24 774 aa22.72■■□□□ 1.23
PKD1-230ENST00000565639 HHIPL2Q6UWX4 724 aa22.72■■□□□ 1.23
PKD1-230ENST00000565639 MRIQ9BWK5 157 aa22.72■■□□□ 1.23
PKD1-230ENST00000565639 INCENPQ9NQS7 918 aa22.72■■□□□ 1.23
PKD1-230ENST00000565639 ZSWIM5Q9P217 1185 aa22.72■■□□□ 1.23
PKD1-230ENST00000565639 SCN9AQ15858 1988 aa22.71■■□□□ 1.23
PKD1-230ENST00000565639 SH2B2O14492 632 aaPredicted RBP22.71■■□□□ 1.23
PKD1-230ENST00000565639 SLC3A2P08195 630 aaKnown RBP22.71■■□□□ 1.23
PKD1-230ENST00000565639 PDIA3P30101 505 aaKnown RBP22.71■■□□□ 1.23
PKD1-230ENST00000565639 DALRD3Q5D0E6 543 aaKnown RBP22.71■■□□□ 1.23
PKD1-230ENST00000565639 CLEC17AQ6ZS10 378 aa22.71■■□□□ 1.23
PKD1-230ENST00000565639 NKX2-3Q8TAU0 364 aa22.71■■□□□ 1.23
PKD1-230ENST00000565639 LLPHQ9BRT6 129 aaKnown RBP22.71■■□□□ 1.23
PKD1-230ENST00000565639 MCM9Q9NXL9 1143 aa22.71■■□□□ 1.23
PKD1-230ENST00000565639 BRCA1P38398 1863 aaKnown RBP22.71■■□□□ 1.23
PKD1-230ENST00000565639 ZNF646O15015 1829 aaPredicted RBP22.71■■□□□ 1.23
PKD1-230ENST00000565639 BRD1O95696 1058 aa22.7■■□□□ 1.23
PKD1-230ENST00000565639 PDIA4P13667 645 aaKnown RBP22.7■■□□□ 1.23
PKD1-230ENST00000565639 GJB2P29033 226 aa22.7■■□□□ 1.23
PKD1-230ENST00000565639 PTGER2P43116 358 aa22.7■■□□□ 1.23
PKD1-230ENST00000565639 RHBDL3P58872 404 aa22.7■■□□□ 1.23
PKD1-230ENST00000565639 PKP1Q13835 747 aa22.7■■□□□ 1.23
PKD1-230ENST00000565639 NBR1Q14596 966 aa22.7■■□□□ 1.23
PKD1-230ENST00000565639 IGDCC4Q8TDY8 1250 aa22.7■■□□□ 1.23
PKD1-230ENST00000565639 ESR2Q92731 530 aa22.7■■□□□ 1.23
PKD1-230ENST00000565639 GPHNQ9NQX3 736 aaPredicted RBP22.7■■□□□ 1.23
PKD1-230ENST00000565639 KCNQ5Q9NR82 932 aa22.7■■□□□ 1.23
PKD1-230ENST00000565639 CYP2D7A0A087X1C5 515 aa22.7■■□□□ 1.22
PKD1-230ENST00000565639 PSDA5PKW4 1024 aaPredicted RBP22.7■■□□□ 1.22
PKD1-230ENST00000565639 NT5C2P49902 561 aa22.7■■□□□ 1.22
PKD1-230ENST00000565639 TEX11Q8IYF3 940 aa22.7■■□□□ 1.22
PKD1-230ENST00000565639 MXD3Q9BW11 206 aa22.7■■□□□ 1.22
PKD1-230ENST00000565639 TOMM22Q9NS69 142 aa22.7■■□□□ 1.22
PKD1-230ENST00000565639 ZDHHC9Q9Y397 364 aa22.7■■□□□ 1.22
PKD1-230ENST00000565639 LIFRP42702 1097 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 HDLBPQ00341 1268 aaKnown RBP22.69■■□□□ 1.22
PKD1-230ENST00000565639 SCRN1Q12765 414 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 AMOTL1Q8IY63 956 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 TGFBRAP1Q8WUH2 860 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 GBP4Q96PP9 640 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 CDK5RAP2Q96SN8 1893 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 F8W031 263 aaPredicted RBP22.69■■□□□ 1.22
PKD1-230ENST00000565639 ORC4O43929 436 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 SART3Q15020 963 aaKnown RBP22.69■■□□□ 1.22
PKD1-230ENST00000565639 RRP12Q5JTH9 1297 aaKnown RBP22.69■■□□□ 1.22
PKD1-230ENST00000565639 C12orf60Q5U649 245 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 SGMS1Q86VZ5 419 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 TEKT1Q969V4 418 aa22.69■■□□□ 1.22
PKD1-230ENST00000565639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.69■■□□□ 1.22
PKD1-230ENST00000565639 NAV1Q8NEY1 1877 aa22.68■■□□□ 1.22
PKD1-230ENST00000565639 KLF18A0A0U1RQI7 1052 aa22.68■■□□□ 1.22
PKD1-230ENST00000565639 BRPF3Q9ULD4 1205 aa22.68■■□□□ 1.22
PKD1-230ENST00000565639 ROBO3Q96MS0 1386 aa22.68■■□□□ 1.22
PKD1-230ENST00000565639 WDR33Q9C0J8 1336 aaKnown RBP22.67■■□□□ 1.22
PKD1-230ENST00000565639 USP17L8P0C7I0 530 aa22.67■■□□□ 1.22
PKD1-230ENST00000565639 TMEM67Q5HYA8 995 aa22.67■■□□□ 1.22
PKD1-230ENST00000565639 LY9Q9HBG7 655 aa22.67■■□□□ 1.22
PKD1-230ENST00000565639 PSME4Q14997 1843 aa22.67■■□□□ 1.22
PKD1-230ENST00000565639 SMIM22K7EJ46 135 aa22.67■■□□□ 1.22
PKD1-230ENST00000565639 IFIT3O14879 490 aaKnown RBP22.67■■□□□ 1.22
PKD1-230ENST00000565639 MCM4P33991 863 aa22.67■■□□□ 1.22
PKD1-230ENST00000565639 PDE4BQ07343 736 aa22.67■■□□□ 1.22
PKD1-230ENST00000565639 LARGE2Q8N3Y3 721 aa22.67■■□□□ 1.22
PKD1-230ENST00000565639 PPP1R1BQ9UD71 204 aaPredicted RBP22.67■■□□□ 1.22
PKD1-230ENST00000565639 YDJCA8MPS7 323 aa22.66■■□□□ 1.22
PKD1-230ENST00000565639 PDCP20941 246 aa22.66■■□□□ 1.22
PKD1-230ENST00000565639 SYT1P21579 422 aa22.66■■□□□ 1.22
PKD1-230ENST00000565639 TMTC2Q8N394 836 aa22.66■■□□□ 1.22
PKD1-230ENST00000565639 SMARCC2Q8TAQ2 1214 aa22.66■■□□□ 1.22
PKD1-230ENST00000565639 NAP1L2Q9ULW6 460 aaPredicted RBP22.66■■□□□ 1.22
PKD1-230ENST00000565639 DDX60LQ5H9U9 1706 aaKnown RBP22.66■■□□□ 1.22
PKD1-230ENST00000565639 FOCADQ5VW36 1801 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 CYP2D6P10635 497 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 MAPKAPK5Q8IW41 473 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 STK11IPQ8N1F8 1099 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 ZDHHC15Q96MV8 337 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 ZNF277Q9NRM2 450 aaPredicted RBP22.65■■□□□ 1.22
PKD1-230ENST00000565639 FLT1P17948 1338 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 ERICH2A1L162 156 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 GOLGA8BA8MQT2 603 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 STX6O43752 255 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 DHX16O60231 1041 aaKnown RBP22.65■■□□□ 1.22
PKD1-230ENST00000565639 CRKP46108 304 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 SCNN1DP51172 638 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 HPS5Q9UPZ3 1129 aa22.65■■□□□ 1.22
PKD1-230ENST00000565639 MYO3BQ8WXR4 1341 aa22.64■■□□□ 1.22
PKD1-230ENST00000565639 CCT2P78371 535 aaKnown RBP22.64■■□□□ 1.21
PKD1-230ENST00000565639 HMGN5P82970 282 aaKnown RBP22.64■■□□□ 1.21
PKD1-230ENST00000565639 KIAA0825Q8IV33 1275 aa22.64■■□□□ 1.21
PKD1-230ENST00000565639 NSUN7Q8NE18 718 aaKnown RBP22.64■■□□□ 1.21
PKD1-230ENST00000565639 UBAC1Q9BSL1 405 aa22.64■■□□□ 1.21
PKD1-230ENST00000565639 FER1L6Q2WGJ9 1857 aa22.63■■□□□ 1.21
PKD1-230ENST00000565639 APOBEC3HQ6NTF7 200 aaKnown RBP22.63■■□□□ 1.21
PKD1-230ENST00000565639 APOA5Q6Q788 366 aa22.63■■□□□ 1.21
PKD1-230ENST00000565639 SERPINA10Q9UK55 444 aa22.63■■□□□ 1.21
PKD1-230ENST00000565639 POLR3DP05423 398 aaPredicted RBP22.63■■□□□ 1.21
PKD1-230ENST00000565639 IARSP41252 1262 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms