RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 CTNNA3Q9UI47 895 aa15.41■□□□□ 0.06
SPG7-209ENST00000564047 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
SPG7-209ENST00000564047 RBM8AQ9Y5S9 174 aaKnown RBP15.41■□□□□ 0.06
SPG7-209ENST00000564047 ZMYM6O95789 1325 aa15.41■□□□□ 0.06
SPG7-209ENST00000564047 PDE4DIPQ5VU43 2346 aa15.4■□□□□ 0.06
SPG7-209ENST00000564047 ITGBL1O95965 494 aaPredicted RBP15.4■□□□□ 0.06
SPG7-209ENST00000564047 APPP05067 770 aa15.4■□□□□ 0.06
SPG7-209ENST00000564047 RBM25P49756 843 aaKnown RBP15.4■□□□□ 0.06
SPG7-209ENST00000564047 NECTIN1Q15223 517 aa15.4■□□□□ 0.06
SPG7-209ENST00000564047 CDC42EP5Q6NZY7 148 aa15.4■□□□□ 0.06
SPG7-209ENST00000564047 MICALL2Q8IY33 904 aa15.4■□□□□ 0.06
SPG7-209ENST00000564047 IFNL3Q8IZI9 196 aa15.4■□□□□ 0.06
SPG7-209ENST00000564047 BEGAINQ9BUH8 593 aa15.4■□□□□ 0.06
SPG7-209ENST00000564047 EPB41L4AQ9HCS5 686 aaPredicted RBP15.4■□□□□ 0.06
SPG7-209ENST00000564047 MYOZ2Q9NPC6 264 aa15.4■□□□□ 0.06
SPG7-209ENST00000564047 USP40Q9NVE5 1235 aa15.4■□□□□ 0.06
SPG7-209ENST00000564047 CNOT7Q9UIV1 285 aaKnown RBP15.4■□□□□ 0.06
SPG7-209ENST00000564047 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
SPG7-209ENST00000564047 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 H7C1D1 291 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 FGAP02671 866 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 TEX11Q8IYF3 940 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 SDR42E1Q8WUS8 393 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 DDRGK1Q96HY6 314 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 ZBED3Q96IU2 234 aaPredicted RBP15.39■□□□□ 0.05
SPG7-209ENST00000564047 PRMT6Q96LA8 375 aaPredicted RBP15.39■□□□□ 0.05
SPG7-209ENST00000564047 NAPBQ9H115 298 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 GPRC5DQ9NZD1 345 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 PCDHAC2Q9Y5I4 1007 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
SPG7-209ENST00000564047 USP5P45974 858 aa15.38■□□□□ 0.05
SPG7-209ENST00000564047 TDO2P48775 406 aa15.38■□□□□ 0.05
SPG7-209ENST00000564047 RNF20Q5VTR2 975 aa15.38■□□□□ 0.05
SPG7-209ENST00000564047 TGFBRAP1Q8WUH2 860 aa15.38■□□□□ 0.05
SPG7-209ENST00000564047 KCNB2Q92953 911 aa15.38■□□□□ 0.05
SPG7-209ENST00000564047 DCP1AQ9NPI6 582 aaPredicted RBP15.38■□□□□ 0.05
SPG7-209ENST00000564047 ABT1Q9ULW3 272 aaKnown RBP15.38■□□□□ 0.05
SPG7-209ENST00000564047 SHTN1A0MZ66 631 aa15.37■□□□□ 0.05
SPG7-209ENST00000564047 SLC27A2O14975 620 aa15.37■□□□□ 0.05
SPG7-209ENST00000564047 NPM3O75607 178 aaKnown RBP15.37■□□□□ 0.05
SPG7-209ENST00000564047 WDHD1O75717 1129 aaPredicted RBP15.37■□□□□ 0.05
SPG7-209ENST00000564047 ANAPC15P60006 121 aa15.37■□□□□ 0.05
SPG7-209ENST00000564047 CREB3L3Q68CJ9 461 aa15.37■□□□□ 0.05
SPG7-209ENST00000564047 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
SPG7-209ENST00000564047 IDI2Q9BXS1 227 aa15.37■□□□□ 0.05
SPG7-209ENST00000564047 TDRD3Q9H7E2 651 aaKnown RBP15.37■□□□□ 0.05
SPG7-209ENST00000564047 HACL1Q9UJ83 578 aa15.37■□□□□ 0.05
SPG7-209ENST00000564047 WNT10BO00744 389 aa15.36■□□□□ 0.05
SPG7-209ENST00000564047 ZNF213O14771 459 aa15.36■□□□□ 0.05
SPG7-209ENST00000564047 MYO1BO43795 1136 aa15.36■□□□□ 0.05
SPG7-209ENST00000564047 ZKSCAN1P17029 563 aaPredicted RBP15.36■□□□□ 0.05
SPG7-209ENST00000564047 LMOD1P29536 600 aaPredicted RBP15.36■□□□□ 0.05
SPG7-209ENST00000564047 IMMTQ16891 758 aaKnown RBP15.36■□□□□ 0.05
SPG7-209ENST00000564047 SBK1Q52WX2 424 aa15.36■□□□□ 0.05
SPG7-209ENST00000564047 IL17RAQ96F46 866 aa15.36■□□□□ 0.05
SPG7-209ENST00000564047 TMOD2Q9NZR1 351 aa15.36■□□□□ 0.05
SPG7-209ENST00000564047 ARPP21Q9UBL0 812 aaPredicted RBP15.36■□□□□ 0.05
SPG7-209ENST00000564047 FLT1P17948 1338 aa15.36■□□□□ 0.05
SPG7-209ENST00000564047 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
SPG7-209ENST00000564047 CYP21A2P08686 494 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 EPHX2P34913 555 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 KIF4BQ2VIQ3 1234 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 TSGA10IPQ3SY00 556 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 FKBP1CQ5VVH2 108 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 SAMD7Q7Z3H4 446 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 MAPKAPK5Q8IW41 473 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 MCM9Q9NXL9 1143 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 ZNF70Q9UC06 446 aaPredicted RBP15.35■□□□□ 0.05
SPG7-209ENST00000564047 PALD1Q9ULE6 856 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 SNX14Q9Y5W7 946 aa15.35■□□□□ 0.05
SPG7-209ENST00000564047 USP17L12C9JPN9 530 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 USP17L21D6R901 530 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 ENTPD3O75355 529 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 EGFRP00533 1210 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 EPS15P42566 896 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 ECE1P42892 770 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 TBC1D10BQ4KMP7 808 aaPredicted RBP15.34■□□□□ 0.05
SPG7-209ENST00000564047 RBM26Q5T8P6 1007 aaKnown RBP15.34■□□□□ 0.05
SPG7-209ENST00000564047 MAP1SQ66K74 1059 aaPredicted RBP15.34■□□□□ 0.05
SPG7-209ENST00000564047 CTR9Q6PD62 1173 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
SPG7-209ENST00000564047 AMOTL1Q8IY63 956 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 RASEFQ8IZ41 740 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 DDX4Q9NQI0 724 aaKnown RBP15.34■□□□□ 0.05
SPG7-209ENST00000564047 ADARB2Q9NS39 739 aaKnown RBP15.34■□□□□ 0.05
SPG7-209ENST00000564047 ANAPC4Q9UJX5 808 aa15.34■□□□□ 0.05
SPG7-209ENST00000564047 PPARAQ07869 468 aa15.33■□□□□ 0.04
SPG7-209ENST00000564047 NFIAQ12857 509 aa15.33■□□□□ 0.04
SPG7-209ENST00000564047 PICALMQ13492 652 aa15.33■□□□□ 0.04
SPG7-209ENST00000564047 KRT32Q14532 448 aa15.33■□□□□ 0.04
SPG7-209ENST00000564047 OSBPL5Q9H0X9 879 aaPredicted RBP15.33■□□□□ 0.04
SPG7-209ENST00000564047 FAM198AQ9UFP1 575 aa15.33■□□□□ 0.04
SPG7-209ENST00000564047 THSD7BQ9C0I4 1608 aa15.32■□□□□ 0.04
SPG7-209ENST00000564047 CLRN2A0PK11 232 aa15.32■□□□□ 0.04
SPG7-209ENST00000564047 MINDY4BA8MYZ0 360 aa15.32■□□□□ 0.04
SPG7-209ENST00000564047 CACNB3P54284 484 aa15.32■□□□□ 0.04
SPG7-209ENST00000564047 HAND2P61296 217 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms