RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 RFC4P35249 363 aa22.7■■□□□ 1.23
CDH5-204ENST00000563425 SNW1Q13573 536 aaKnown RBP22.7■■□□□ 1.23
CDH5-204ENST00000563425 TRAPPC3LQ5T215 181 aa22.7■■□□□ 1.23
CDH5-204ENST00000563425 CCDC73Q6ZRK6 1079 aa22.7■■□□□ 1.23
CDH5-204ENST00000563425 CCDC144CPQ8IYA2 1237 aa22.7■■□□□ 1.23
CDH5-204ENST00000563425 ENGASEQ8NFI3 743 aa22.7■■□□□ 1.23
CDH5-204ENST00000563425 PHKBQ93100 1093 aa22.7■■□□□ 1.23
CDH5-204ENST00000563425 AIFM3Q96NN9 605 aa22.7■■□□□ 1.23
CDH5-204ENST00000563425 PCDHA7Q9UN72 937 aa22.7■■□□□ 1.23
CDH5-204ENST00000563425 DUOX1Q9NRD9 1551 aa22.7■■□□□ 1.22
CDH5-204ENST00000563425 CTAGE5O15320 804 aa22.7■■□□□ 1.22
CDH5-204ENST00000563425 RANBP6O60518 1105 aaKnown RBP22.7■■□□□ 1.22
CDH5-204ENST00000563425 HIBADHP31937 336 aaKnown RBP22.7■■□□□ 1.22
CDH5-204ENST00000563425 IARSP41252 1262 aaKnown RBP22.7■■□□□ 1.22
CDH5-204ENST00000563425 FAM160A1Q05DH4 1040 aa22.7■■□□□ 1.22
CDH5-204ENST00000563425 MEX3CQ5U5Q3 659 aaKnown RBP22.7■■□□□ 1.22
CDH5-204ENST00000563425 ADALQ6DHV7 355 aa22.7■■□□□ 1.22
CDH5-204ENST00000563425 SYNE3Q6ZMZ3 975 aa22.7■■□□□ 1.22
CDH5-204ENST00000563425 TOMM22Q9NS69 142 aa22.7■■□□□ 1.22
CDH5-204ENST00000563425 CLIC4Q9Y696 253 aa22.7■■□□□ 1.22
CDH5-204ENST00000563425 A0A1W2PQ27 194 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 A0A1W2PQ64 194 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 A0A1W2PQD8 194 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 PTMAP06454 111 aaKnown RBP22.69■■□□□ 1.22
CDH5-204ENST00000563425 WTAPQ15007 396 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 ANO6Q4KMQ2 910 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 SASS6Q6UVJ0 657 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 BRIP1Q9BX63 1249 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 AFF2P51816 1311 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 ZBTB22O15209 634 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 DYNLL1P63167 89 aaKnown RBP22.69■■□□□ 1.22
CDH5-204ENST00000563425 STK38Q15208 465 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 KRT40Q6A162 431 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 TMTC2Q8N394 836 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 FSIP1Q8NA03 581 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 KCNG4Q8TDN1 519 aa22.69■■□□□ 1.22
CDH5-204ENST00000563425 MINDY4BA8MYZ0 360 aa22.68■■□□□ 1.22
CDH5-204ENST00000563425 NSUN4Q96CB9 384 aaKnown RBP22.68■■□□□ 1.22
CDH5-204ENST00000563425 ZKSCAN3Q9BRR0 538 aa22.68■■□□□ 1.22
CDH5-204ENST00000563425 ERICH2A1L162 156 aa22.67■■□□□ 1.22
CDH5-204ENST00000563425 AP5Z1O43299 807 aa22.67■■□□□ 1.22
CDH5-204ENST00000563425 ZNF500O60304 480 aaPredicted RBP22.67■■□□□ 1.22
CDH5-204ENST00000563425 IFNAR1P17181 557 aa22.67■■□□□ 1.22
CDH5-204ENST00000563425 RCAN1P53805 252 aa22.67■■□□□ 1.22
CDH5-204ENST00000563425 FAM196AQ6ZSG2 479 aa22.67■■□□□ 1.22
CDH5-204ENST00000563425 MRPS27Q92552 414 aaKnown RBP22.67■■□□□ 1.22
CDH5-204ENST00000563425 TFCP2L1Q9NZI6 479 aa22.67■■□□□ 1.22
CDH5-204ENST00000563425 IRS2Q9Y4H2 1338 aa22.67■■□□□ 1.22
CDH5-204ENST00000563425 FMNL1O95466 1100 aaPredicted RBP22.67■■□□□ 1.22
CDH5-204ENST00000563425 SSRP1Q08945 709 aaKnown RBP22.67■■□□□ 1.22
CDH5-204ENST00000563425 CBX8Q9HC52 389 aa22.67■■□□□ 1.22
CDH5-204ENST00000563425 SPTLC2O15270 562 aa22.66■■□□□ 1.22
CDH5-204ENST00000563425 KINO60870 393 aaKnown RBP22.66■■□□□ 1.22
CDH5-204ENST00000563425 MECOMQ03112 1051 aa22.66■■□□□ 1.22
CDH5-204ENST00000563425 NFIXQ14938 502 aa22.66■■□□□ 1.22
CDH5-204ENST00000563425 ANO1Q5XXA6 986 aa22.66■■□□□ 1.22
CDH5-204ENST00000563425 STK11IPQ8N1F8 1099 aa22.66■■□□□ 1.22
CDH5-204ENST00000563425 ESR2Q92731 530 aa22.66■■□□□ 1.22
CDH5-204ENST00000563425 NPHP1O15259 732 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 CAVIN2O95810 425 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 SF3A1Q15459 793 aaKnown RBP22.65■■□□□ 1.22
CDH5-204ENST00000563425 TMED8Q6PL24 325 aaPredicted RBP22.65■■□□□ 1.22
CDH5-204ENST00000563425 SEPT12Q8IYM1 358 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 SLC26A6Q9BXS9 759 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 BCL11BQ9C0K0 894 aaPredicted RBP22.65■■□□□ 1.22
CDH5-204ENST00000563425 ADRA2BP18089 450 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 TRIM29Q14134 588 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 SEC23AQ15436 765 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 RTN1Q16799 776 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 LUZP1Q86V48 1076 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 FMR1NBQ8N0W7 255 aaPredicted RBP22.65■■□□□ 1.22
CDH5-204ENST00000563425 WASF1Q92558 559 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 UBAC1Q9BSL1 405 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 LRRC4BQ9NT99 713 aa22.65■■□□□ 1.22
CDH5-204ENST00000563425 U2AF2P26368 475 aaKnown RBP eCLIP22.64■■□□□ 1.21
CDH5-204ENST00000563425 TXNRD3Q86VQ6 643 aa22.64■■□□□ 1.21
CDH5-204ENST00000563425 FGRP09769 529 aa22.63■■□□□ 1.21
CDH5-204ENST00000563425 PCP11498 1178 aaKnown RBP22.63■■□□□ 1.21
CDH5-204ENST00000563425 ZNF654Q8IZM8 581 aa22.63■■□□□ 1.21
CDH5-204ENST00000563425 TRPC5Q9UL62 973 aaPredicted RBP22.63■■□□□ 1.21
CDH5-204ENST00000563425 CCDC196A0A1B0GTZ2 297 aa22.63■■□□□ 1.21
CDH5-204ENST00000563425 SMIM22K7EJ46 135 aa22.63■■□□□ 1.21
CDH5-204ENST00000563425 PLCB2Q00722 1185 aa22.63■■□□□ 1.21
CDH5-204ENST00000563425 GRAPQ13588 217 aa22.63■■□□□ 1.21
CDH5-204ENST00000563425 SLC39A14Q15043 492 aa22.63■■□□□ 1.21
CDH5-204ENST00000563425 CNBD1Q8NA66 436 aa22.63■■□□□ 1.21
CDH5-204ENST00000563425 GRAPLQ8TC17 118 aaPredicted RBP22.63■■□□□ 1.21
CDH5-204ENST00000563425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.63■■□□□ 1.21
CDH5-204ENST00000563425 TNKSO95271 1327 aa22.62■■□□□ 1.21
CDH5-204ENST00000563425 ZNF165P49910 485 aa22.62■■□□□ 1.21
CDH5-204ENST00000563425 CHAF1AQ13111 956 aaPredicted RBP22.62■■□□□ 1.21
CDH5-204ENST00000563425 CTR9Q6PD62 1173 aa22.62■■□□□ 1.21
CDH5-204ENST00000563425 NBPF11Q86T75 865 aa22.62■■□□□ 1.21
CDH5-204ENST00000563425 TDRD7Q8NHU6 1098 aaKnown RBP22.62■■□□□ 1.21
CDH5-204ENST00000563425 DNAJC25Q9H1X3 360 aa22.62■■□□□ 1.21
CDH5-204ENST00000563425 CYP2D7A0A087X1C5 515 aa22.61■■□□□ 1.21
CDH5-204ENST00000563425 A0A1B0GVL5 298 aa22.61■■□□□ 1.21
CDH5-204ENST00000563425 UBE2Q2LH0YL09 131 aa22.61■■□□□ 1.21
CDH5-204ENST00000563425 PRDX5P30044 214 aa22.61■■□□□ 1.21
CDH5-204ENST00000563425 TRIM22Q8IYM9 498 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms