RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 DOCK2Q92608 1830 aa19.22■□□□□ 0.67
USB1-208ENST00000563207 RFX7Q2KHR2 1363 aa19.21■□□□□ 0.67
USB1-208ENST00000563207 ATRNL1Q5VV63 1379 aa19.21■□□□□ 0.67
USB1-208ENST00000563207 DDTLA6NHG4 134 aaPredicted RBP19.21■□□□□ 0.67
USB1-208ENST00000563207 WDHD1O75717 1129 aaPredicted RBP19.21■□□□□ 0.67
USB1-208ENST00000563207 PPIL2Q13356 520 aa19.21■□□□□ 0.67
USB1-208ENST00000563207 EXOC6Q8TAG9 804 aa19.21■□□□□ 0.67
USB1-208ENST00000563207 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.21■□□□□ 0.67
USB1-208ENST00000563207 POTEFA5A3E0 1075 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 PHF20L1A8MW92 1017 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 ZBTB22O15209 634 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 MCAMP43121 646 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 BTDP43251 543 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 OS9Q13438 667 aaPredicted RBP19.2■□□□□ 0.66
USB1-208ENST00000563207 PICALMQ13492 652 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 MOGSQ13724 837 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 ERO1AQ96HE7 468 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 EFCC1Q9HA90 598 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 SNRKQ9NRH2 765 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 PCDHB15Q9Y5E8 787 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 BRCA2P51587 3418 aa19.2■□□□□ 0.66
USB1-208ENST00000563207 MYO5AQ9Y4I1 1855 aaKnown RBP19.2■□□□□ 0.66
USB1-208ENST00000563207 RAB11FIP3O75154 756 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 CETPP11597 493 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 RHBDL3P58872 404 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 SNAPC2Q13487 334 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 SPATA5Q8NB90 893 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 HOOK2Q96ED9 719 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 IDI2Q9BXS1 227 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 ZFYVE28Q9HCC9 887 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 GPR108Q9NPR9 543 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 MKI67P46013 3256 aaKnown RBP19.19■□□□□ 0.66
USB1-208ENST00000563207 MROH7-TTC4A0A0A0MT08 1334 aa19.19■□□□□ 0.66
USB1-208ENST00000563207 PDS5AQ29RF7 1337 aaKnown RBP19.19■□□□□ 0.66
USB1-208ENST00000563207 FAM196BA6NMK8 535 aa19.18■□□□□ 0.66
USB1-208ENST00000563207 PPATQ06203 517 aa19.18■□□□□ 0.66
USB1-208ENST00000563207 GORABQ5T7V8 394 aa19.18■□□□□ 0.66
USB1-208ENST00000563207 ERICH6Q7L0X2 663 aa19.18■□□□□ 0.66
USB1-208ENST00000563207 ZGPATQ8N5A5 531 aaKnown RBP19.18■□□□□ 0.66
USB1-208ENST00000563207 FAM163AQ96GL9 167 aaPredicted RBP19.18■□□□□ 0.66
USB1-208ENST00000563207 GPR75-ASB3A0A0A6YYF3 556 aa19.17■□□□□ 0.66
USB1-208ENST00000563207 ENTPD3O75355 529 aa19.17■□□□□ 0.66
USB1-208ENST00000563207 CTGFP29279 349 aa19.17■□□□□ 0.66
USB1-208ENST00000563207 ARID4AP29374 1257 aaPredicted RBP19.17■□□□□ 0.66
USB1-208ENST00000563207 CCDC84Q86UT8 332 aaPredicted RBP19.17■□□□□ 0.66
USB1-208ENST00000563207 NSUN4Q96CB9 384 aaKnown RBP19.17■□□□□ 0.66
USB1-208ENST00000563207 DBNDD2Q9BQY9 259 aa19.17■□□□□ 0.66
USB1-208ENST00000563207 TLR2O60603 784 aa19.16■□□□□ 0.66
USB1-208ENST00000563207 HDAC1Q13547 482 aaPredicted RBP19.16■□□□□ 0.66
USB1-208ENST00000563207 NOL9Q5SY16 702 aaKnown RBP19.16■□□□□ 0.66
USB1-208ENST00000563207 SPTY2D1Q68D10 685 aaPredicted RBP19.16■□□□□ 0.66
USB1-208ENST00000563207 ZSCAN29Q8IWY8 852 aaPredicted RBP19.16■□□□□ 0.66
USB1-208ENST00000563207 KIF1BPQ96EK5 621 aa19.16■□□□□ 0.66
USB1-208ENST00000563207 DCTPP1Q9H773 170 aa19.16■□□□□ 0.66
USB1-208ENST00000563207 CPA4Q9UI42 421 aa19.16■□□□□ 0.66
USB1-208ENST00000563207 KCNH4Q9UQ05 1017 aa19.16■□□□□ 0.66
USB1-208ENST00000563207 EXOC6BQ9Y2D4 811 aa19.16■□□□□ 0.66
USB1-208ENST00000563207 PTCH2Q9Y6C5 1203 aa19.16■□□□□ 0.66
USB1-208ENST00000563207 PHIPQ8WWQ0 1821 aa19.16■□□□□ 0.66
USB1-208ENST00000563207 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
USB1-208ENST00000563207 TNNI3KQ59H18 835 aa19.15■□□□□ 0.66
USB1-208ENST00000563207 GPAT2Q6NUI2 795 aa19.15■□□□□ 0.66
USB1-208ENST00000563207 RWDD1Q9H446 243 aaPredicted RBP19.15■□□□□ 0.66
USB1-208ENST00000563207 TLR7Q9NYK1 1049 aaKnown RBP19.15■□□□□ 0.66
USB1-208ENST00000563207 RAI14Q9P0K7 980 aa19.15■□□□□ 0.66
USB1-208ENST00000563207 FPGT-TNNI3KV9GXZ4 949 aa19.15■□□□□ 0.66
USB1-208ENST00000563207 PDHXO00330 501 aa19.14■□□□□ 0.65
USB1-208ENST00000563207 MYCP01106 439 aaPredicted RBP19.14■□□□□ 0.65
USB1-208ENST00000563207 NEFLP07196 543 aa19.14■□□□□ 0.65
USB1-208ENST00000563207 PTPRAP18433 802 aa19.13■□□□□ 0.65
USB1-208ENST00000563207 MAP3K10Q02779 954 aa19.13■□□□□ 0.65
USB1-208ENST00000563207 RRP1BQ14684 758 aaKnown RBP19.13■□□□□ 0.65
USB1-208ENST00000563207 C17orf99Q6UX52 265 aa19.13■□□□□ 0.65
USB1-208ENST00000563207 ADGRA1Q86SQ6 560 aa19.13■□□□□ 0.65
USB1-208ENST00000563207 SCYL3Q8IZE3 742 aa19.13■□□□□ 0.65
USB1-208ENST00000563207 RHPN1Q8TCX5 695 aa19.13■□□□□ 0.65
USB1-208ENST00000563207 ZHX2Q9Y6X8 837 aa19.13■□□□□ 0.65
USB1-208ENST00000563207 ADGRA2Q96PE1 1338 aa19.13■□□□□ 0.65
USB1-208ENST00000563207 DOCK1Q14185 1865 aa19.13■□□□□ 0.65
USB1-208ENST00000563207 PTPRFP10586 1907 aa19.12■□□□□ 0.65
USB1-208ENST00000563207 CDK5RAP2Q96SN8 1893 aa19.12■□□□□ 0.65
USB1-208ENST00000563207 CYP2C8P10632 490 aa19.12■□□□□ 0.65
USB1-208ENST00000563207 LACTBP83111 547 aaPredicted RBP19.12■□□□□ 0.65
USB1-208ENST00000563207 ANKRD23Q86SG2 305 aa19.12■□□□□ 0.65
USB1-208ENST00000563207 SLF2Q8IX21 1173 aa19.12■□□□□ 0.65
USB1-208ENST00000563207 SH3RF3Q8TEJ3 882 aaPredicted RBP19.12■□□□□ 0.65
USB1-208ENST00000563207 ARMC5Q96C12 935 aa19.12■□□□□ 0.65
USB1-208ENST00000563207 GCC1Q96CN9 775 aa19.12■□□□□ 0.65
USB1-208ENST00000563207 CCDC8Q9H0W5 538 aaPredicted RBP19.12■□□□□ 0.65
USB1-208ENST00000563207 LRP2BPQ9P2M1 347 aa19.12■□□□□ 0.65
USB1-208ENST00000563207 NDUFB9Q9Y6M9 179 aa19.12■□□□□ 0.65
USB1-208ENST00000563207 SIPA1L1O43166 1804 aa19.11■□□□□ 0.65
USB1-208ENST00000563207 CYP2E1P05181 493 aaPredicted RBP19.11■□□□□ 0.65
USB1-208ENST00000563207 EN2P19622 333 aaPredicted RBP19.11■□□□□ 0.65
USB1-208ENST00000563207 TTC39AQ5SRH9 613 aa19.11■□□□□ 0.65
USB1-208ENST00000563207 CLASRPQ8N2M8 674 aaKnown RBP19.11■□□□□ 0.65
USB1-208ENST00000563207 EAF2Q96CJ1 260 aaPredicted RBP19.11■□□□□ 0.65
USB1-208ENST00000563207 LRRCC1Q9C099 1032 aa19.11■□□□□ 0.65
USB1-208ENST00000563207 ZCCHC17Q9NP64 241 aaKnown RBP19.11■□□□□ 0.65
USB1-208ENST00000563207 DBNLQ9UJU6 430 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms