RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 DISC1Q9NRI5 854 aa6.42□□□□□ -1.38
HDGFL3-202ENST00000562702 LEFTY1O75610 366 aa6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 ABL1P00519 1130 aa6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 CFPP27918 469 aa6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 PPP2R3AQ06190 1150 aa6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 SYDE1Q6ZW31 735 aaPredicted RBP6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 TOP6BLQ8N6T0 577 aa6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 TNKS2Q9H2K2 1166 aa6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 BRPF3Q9ULD4 1205 aa6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 TRAK1Q9UPV9 953 aa6.41□□□□□ -1.38
HDGFL3-202ENST00000562702 ZNF503-AS2A6NEH8 195 aa6.4□□□□□ -1.38
HDGFL3-202ENST00000562702 NFIBO00712 420 aa6.4□□□□□ -1.38
HDGFL3-202ENST00000562702 CPNE3O75131 537 aaKnown RBP6.4□□□□□ -1.38
HDGFL3-202ENST00000562702 GSTP1P09211 210 aaKnown RBP6.4□□□□□ -1.38
HDGFL3-202ENST00000562702 ZSCAN22P10073 491 aaPredicted RBP6.4□□□□□ -1.38
HDGFL3-202ENST00000562702 PLAGL2Q9UPG8 496 aa6.4□□□□□ -1.38
HDGFL3-202ENST00000562702 B8ZZF3 427 aa6.39□□□□□ -1.39
HDGFL3-202ENST00000562702 PRRG2O14669 202 aa6.39□□□□□ -1.39
HDGFL3-202ENST00000562702 GLI1P08151 1106 aa6.39□□□□□ -1.39
HDGFL3-202ENST00000562702 PDE3BQ13370 1112 aa6.39□□□□□ -1.39
HDGFL3-202ENST00000562702 ERICH6Q7L0X2 663 aa6.39□□□□□ -1.39
HDGFL3-202ENST00000562702 WDR89Q96FK6 387 aaPredicted RBP6.39□□□□□ -1.39
HDGFL3-202ENST00000562702 LIN37Q96GY3 246 aaPredicted RBP6.39□□□□□ -1.39
HDGFL3-202ENST00000562702 PRDM7Q9NQW5 492 aa6.39□□□□□ -1.39
HDGFL3-202ENST00000562702 PPP4R2Q9NY27 417 aa6.39□□□□□ -1.39
HDGFL3-202ENST00000562702 GNAT3A8MTJ3 354 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 IGF2BP3O00425 579 aaKnown RBP eCLIP6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 GADD45BO75293 160 aaPredicted RBP6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 TMEM67Q5HYA8 995 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 PRPF40BQ6NWY9 871 aaKnown RBP6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 C14orf37Q86TY3 774 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 KCNB2Q92953 911 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 KIRREL1Q96J84 757 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 NPHS2Q9NP85 383 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 LMCD1Q9NZU5 365 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 RAPGEFL1Q9UHV5 662 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 CTNND2Q9UQB3 1225 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 U3KQE9 123 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 NCANO14594 1321 aa6.38□□□□□ -1.39
HDGFL3-202ENST00000562702 TMEM238LA0A1B0GVL6 79 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 NDUFB5O43674 189 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 ZNF862O60290 1169 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 ZNF157P51786 506 aaPredicted RBP6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 CLCN7P51798 805 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 USPL1Q5W0Q7 1092 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 CYFIP1Q7L576 1253 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 CILP2Q8IUL8 1156 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 FBXO15Q8NCQ5 510 aaPredicted RBP6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 RNF214Q8ND24 703 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 ISL2Q96A47 359 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 CCDC120Q96HB5 630 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 ABCB6Q9NP58 842 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 GPN3Q9UHW5 284 aaPredicted RBP6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 PCDHGC5Q9Y5F6 944 aa6.37□□□□□ -1.39
HDGFL3-202ENST00000562702 TMEM39AQ9NV64 488 aa6.36□□□□□ -1.39
HDGFL3-202ENST00000562702 KRTAP9-7A8MTY7 169 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 TMEM253P0C7T8 217 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 ERVK-24P63145 666 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 DTHD1Q6ZMT9 781 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 PRR23BQ6ZRT6 265 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 LCNL1Q6ZST4 164 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 C1QL4Q86Z23 238 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 DNAJC25Q9H1X3 360 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 ANO2Q9NQ90 1003 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 PICK1Q9NRD5 415 aa6.35□□□□□ -1.39
HDGFL3-202ENST00000562702 ZNF211Q13398 564 aaPredicted RBP6.34□□□□□ -1.39
HDGFL3-202ENST00000562702 SPACA3Q8IXA5 215 aa6.34□□□□□ -1.39
HDGFL3-202ENST00000562702 ACSBG1Q96GR2 724 aa6.34□□□□□ -1.39
HDGFL3-202ENST00000562702 HEXIM2Q96MH2 286 aaKnown RBP6.34□□□□□ -1.39
HDGFL3-202ENST00000562702 EMILIN2Q9BXX0 1053 aa6.34□□□□□ -1.39
HDGFL3-202ENST00000562702 PRDM10Q9NQV6 1147 aa6.34□□□□□ -1.39
HDGFL3-202ENST00000562702 NEFMP07197 916 aa6.33□□□□□ -1.4
HDGFL3-202ENST00000562702 C1QTNF9P0C862 333 aa6.33□□□□□ -1.4
HDGFL3-202ENST00000562702 TTLL10Q6ZVT0 673 aa6.33□□□□□ -1.4
HDGFL3-202ENST00000562702 CCDC74AQ96AQ1 378 aa6.33□□□□□ -1.4
HDGFL3-202ENST00000562702 CITED4Q96RK1 184 aa6.33□□□□□ -1.4
HDGFL3-202ENST00000562702 EGFL7Q9UHF1 273 aa6.33□□□□□ -1.4
HDGFL3-202ENST00000562702 PITPNM2Q9BZ72 1349 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 TMEM88BA6NKF7 163 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 XRCC5P13010 732 aaKnown RBP6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 FAAP100Q0VG06 881 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 ORC1Q13415 861 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 ECM1Q16610 540 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 ZC3H12AQ5D1E8 599 aaKnown RBP6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 FYB2Q5VWT5 728 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 CIAPIN1Q6FI81 312 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 CDC37L1Q7L3B6 337 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 NPAS4Q8IUM7 802 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 GLYCTKQ8IVS8 523 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 KCT2Q8NC54 265 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 FOXQ1Q9C009 403 aa6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 PRDM5Q9NQX1 630 aaPredicted RBP6.32□□□□□ -1.4
HDGFL3-202ENST00000562702 ICMTO60725 284 aa6.31□□□□□ -1.4
HDGFL3-202ENST00000562702 PPP1R15AO75807 674 aaPredicted RBP6.31□□□□□ -1.4
HDGFL3-202ENST00000562702 GDNFP39905 211 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms