RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 TTF1Q15361 905 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-206ENST00000562610 ZFPM1Q8IX07 1006 aa19.63■□□□□ 0.73
COMMD4-206ENST00000562610 MAGEB6Q8N7X4 407 aa19.63■□□□□ 0.73
COMMD4-206ENST00000562610 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.63■□□□□ 0.73
COMMD4-206ENST00000562610 SH3RF3Q8TEJ3 882 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-206ENST00000562610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.63■□□□□ 0.73
COMMD4-206ENST00000562610 WNK4Q96J92 1243 aa19.63■□□□□ 0.73
COMMD4-206ENST00000562610 CSRNP1Q96S65 589 aa19.63■□□□□ 0.73
COMMD4-206ENST00000562610 ZNF341Q9BYN7 854 aa19.63■□□□□ 0.73
COMMD4-206ENST00000562610 SUPT16HQ9Y5B9 1047 aaKnown RBP19.63■□□□□ 0.73
COMMD4-206ENST00000562610 IGSF3O75054 1194 aa19.62■□□□□ 0.73
COMMD4-206ENST00000562610 ZBTB48P10074 688 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-206ENST00000562610 MAP3K9P80192 1104 aa19.62■□□□□ 0.73
COMMD4-206ENST00000562610 SREBF2Q12772 1141 aa19.62■□□□□ 0.73
COMMD4-206ENST00000562610 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-206ENST00000562610 REM2Q8IYK8 340 aaPredicted RBP19.62■□□□□ 0.73
COMMD4-206ENST00000562610 BOLA2Q9H3K6 86 aa19.62■□□□□ 0.73
COMMD4-206ENST00000562610 COL2A1P02458 1487 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-206ENST00000562610 MAP4K4O95819 1239 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-206ENST00000562610 PLCG2P16885 1265 aa19.61■□□□□ 0.73
COMMD4-206ENST00000562610 COL13A1Q5TAT6 717 aaPredicted RBP19.61■□□□□ 0.73
COMMD4-206ENST00000562610 OPTNQ96CV9 577 aa19.61■□□□□ 0.73
COMMD4-206ENST00000562610 GPATCH3Q96I76 525 aa19.61■□□□□ 0.73
COMMD4-206ENST00000562610 DDX60LQ5H9U9 1706 aaKnown RBP19.61■□□□□ 0.73
COMMD4-206ENST00000562610 ATP5JP18859 108 aa19.6■□□□□ 0.73
COMMD4-206ENST00000562610 MIGA1Q8NAN2 632 aa19.6■□□□□ 0.73
COMMD4-206ENST00000562610 EDC3Q96F86 508 aaKnown RBP19.6■□□□□ 0.73
COMMD4-206ENST00000562610 PAG1Q9NWQ8 432 aa19.6■□□□□ 0.73
COMMD4-206ENST00000562610 MYH8P13535 1937 aa19.6■□□□□ 0.73
COMMD4-206ENST00000562610 ATRNL1Q5VV63 1379 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 PTPRFP10586 1907 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 DDTLA6NHG4 134 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-206ENST00000562610 MANSC4A6NHS7 340 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-206ENST00000562610 TRPA1O75762 1119 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 AAMPQ13685 434 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 SH3BP5LQ7L8J4 393 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 EXOC6Q8TAG9 804 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 ZKSCAN4Q969J2 545 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-206ENST00000562610 OTUD5Q96G74 571 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 OSBPL5Q9H0X9 879 aaPredicted RBP19.59■□□□□ 0.73
COMMD4-206ENST00000562610 PRDM10Q9NQV6 1147 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 RNF186Q9NXI6 227 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 SAGE1Q9NXZ1 904 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 SNCAIPQ9Y6H5 919 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 PHIPQ8WWQ0 1821 aa19.59■□□□□ 0.73
COMMD4-206ENST00000562610 INPP5BP32019 993 aa19.58■□□□□ 0.72
COMMD4-206ENST00000562610 GJA5P36382 358 aa19.58■□□□□ 0.72
COMMD4-206ENST00000562610 DYNLL1P63167 89 aaKnown RBP19.58■□□□□ 0.72
COMMD4-206ENST00000562610 TGFBRAP1Q8WUH2 860 aa19.58■□□□□ 0.72
COMMD4-206ENST00000562610 CNKSR2Q8WXI2 1034 aa19.58■□□□□ 0.72
COMMD4-206ENST00000562610 HAUS7Q99871 368 aa19.58■□□□□ 0.72
COMMD4-206ENST00000562610 ECHDC1Q9NTX5 307 aa19.58■□□□□ 0.72
COMMD4-206ENST00000562610 ZBTB47Q9UFB7 747 aaPredicted RBP19.58■□□□□ 0.72
COMMD4-206ENST00000562610 BAZ2AQ9UIF9 1905 aaKnown RBP19.58■□□□□ 0.72
COMMD4-206ENST00000562610 FLT1P17948 1338 aa19.57■□□□□ 0.72
COMMD4-206ENST00000562610 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
COMMD4-206ENST00000562610 PDE6AP16499 860 aa19.57■□□□□ 0.72
COMMD4-206ENST00000562610 PPP4CP60510 307 aa19.57■□□□□ 0.72
COMMD4-206ENST00000562610 SLC9C2Q5TAH2 1124 aa19.57■□□□□ 0.72
COMMD4-206ENST00000562610 TSHZ3Q63HK5 1081 aa19.57■□□□□ 0.72
COMMD4-206ENST00000562610 MAPKAPK5Q8IW41 473 aa19.57■□□□□ 0.72
COMMD4-206ENST00000562610 SPDYE5A6NIY4 337 aa19.56■□□□□ 0.72
COMMD4-206ENST00000562610 TM4SF4P48230 202 aa19.56■□□□□ 0.72
COMMD4-206ENST00000562610 HDAC1Q13547 482 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-206ENST00000562610 TMED8Q6PL24 325 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-206ENST00000562610 CERS3Q8IU89 383 aa19.56■□□□□ 0.72
COMMD4-206ENST00000562610 ZNF532Q9HCE3 1301 aa19.55■□□□□ 0.72
COMMD4-206ENST00000562610 ERO1BQ86YB8 467 aa19.55■□□□□ 0.72
COMMD4-206ENST00000562610 GCC1Q96CN9 775 aa19.55■□□□□ 0.72
COMMD4-206ENST00000562610 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.55■□□□□ 0.72
COMMD4-206ENST00000562610 FAM196BA6NMK8 535 aa19.54■□□□□ 0.72
COMMD4-206ENST00000562610 SLURP2P0DP57 97 aa19.54■□□□□ 0.72
COMMD4-206ENST00000562610 USP5P45974 858 aa19.54■□□□□ 0.72
COMMD4-206ENST00000562610 IRX6P78412 446 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-206ENST00000562610 TNS4Q8IZW8 715 aa19.54■□□□□ 0.72
COMMD4-206ENST00000562610 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.54■□□□□ 0.72
COMMD4-206ENST00000562610 ZNF112Q9UJU3 913 aa19.54■□□□□ 0.72
COMMD4-206ENST00000562610 MAGEB6P1A0A0J9YX57 407 aa19.53■□□□□ 0.72
COMMD4-206ENST00000562610 INHBEP58166 350 aa19.53■□□□□ 0.72
COMMD4-206ENST00000562610 SLC4A8Q2Y0W8 1093 aa19.53■□□□□ 0.72
COMMD4-206ENST00000562610 ANKRD45Q5TZF3 282 aa19.53■□□□□ 0.72
COMMD4-206ENST00000562610 IFNL1Q8IU54 200 aa19.53■□□□□ 0.72
COMMD4-206ENST00000562610 SAP30BPQ9UHR5 308 aaKnown RBP19.53■□□□□ 0.72
COMMD4-206ENST00000562610 TTC41PQ6P2S7 1318 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 CCL15-CCL14A0A0B4J2E2 113 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 IGF2BP3O00425 579 aaKnown RBP eCLIP19.52■□□□□ 0.72
COMMD4-206ENST00000562610 TBC1D8O95759 1140 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 ADD2P35612 726 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 GTF2A2P52657 109 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 PPIL2Q13356 520 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 CCL15Q16663 113 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 NOL9Q5SY16 702 aaKnown RBP19.52■□□□□ 0.72
COMMD4-206ENST00000562610 OTUD7AQ8TE49 926 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-206ENST00000562610 TRIM34Q9BYJ4 488 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 DHX36Q9H2U1 1008 aaKnown RBP19.52■□□□□ 0.72
COMMD4-206ENST00000562610 PICK1Q9NRD5 415 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 PALD1Q9ULE6 856 aa19.52■□□□□ 0.72
COMMD4-206ENST00000562610 TCRBV5S4A2TA0A5A2 114 aa19.51■□□□□ 0.71
COMMD4-206ENST00000562610 PHF20L1A8MW92 1017 aa19.51■□□□□ 0.71
COMMD4-206ENST00000562610 IRF6O14896 467 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms