RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 ZFPM1Q8IX07 1006 aa22.76■■□□□ 1.23
PKD1-223ENST00000561668 ZNF384Q8TF68 577 aa22.76■■□□□ 1.23
PKD1-223ENST00000561668 WDHD1O75717 1129 aaPredicted RBP22.75■■□□□ 1.23
PKD1-223ENST00000561668 MAP3K12Q12852 859 aa22.75■■□□□ 1.23
PKD1-223ENST00000561668 TTF1Q15361 905 aaPredicted RBP22.75■■□□□ 1.23
PKD1-223ENST00000561668 ZKSCAN4Q969J2 545 aaPredicted RBP22.75■■□□□ 1.23
PKD1-223ENST00000561668 GCC1Q96CN9 775 aa22.75■■□□□ 1.23
PKD1-223ENST00000561668 TBC1D8O95759 1140 aa22.74■■□□□ 1.23
PKD1-223ENST00000561668 ERO1BQ86YB8 467 aa22.74■■□□□ 1.23
PKD1-223ENST00000561668 SMC5Q8IY18 1101 aa22.74■■□□□ 1.23
PKD1-223ENST00000561668 TEX11Q8IYF3 940 aa22.74■■□□□ 1.23
PKD1-223ENST00000561668 PIH1D3Q9NQM4 214 aaKnown RBP22.74■■□□□ 1.23
PKD1-223ENST00000561668 AATFQ9NY61 560 aaKnown RBP eCLIP22.74■■□□□ 1.23
PKD1-223ENST00000561668 NPM3O75607 178 aaKnown RBP22.73■■□□□ 1.23
PKD1-223ENST00000561668 GTF2A2P52657 109 aa22.73■■□□□ 1.23
PKD1-223ENST00000561668 RHBDL3P58872 404 aa22.73■■□□□ 1.23
PKD1-223ENST00000561668 IFNL1Q8IU54 200 aa22.73■■□□□ 1.23
PKD1-223ENST00000561668 OTUD5Q96G74 571 aa22.73■■□□□ 1.23
PKD1-223ENST00000561668 CYP7A1P22680 504 aa22.72■■□□□ 1.23
PKD1-223ENST00000561668 PPP4CP60510 307 aa22.72■■□□□ 1.23
PKD1-223ENST00000561668 TMED8Q6PL24 325 aaPredicted RBP22.72■■□□□ 1.23
PKD1-223ENST00000561668 RWDD1Q9H446 243 aaPredicted RBP22.72■■□□□ 1.23
PKD1-223ENST00000561668 SPDYE5A6NIY4 337 aa22.71■■□□□ 1.23
PKD1-223ENST00000561668 SMARCA5O60264 1052 aaPredicted RBP22.71■■□□□ 1.23
PKD1-223ENST00000561668 ATP5JP18859 108 aa22.71■■□□□ 1.23
PKD1-223ENST00000561668 GJA5P36382 358 aa22.71■■□□□ 1.23
PKD1-223ENST00000561668 CERS3Q8IU89 383 aa22.71■■□□□ 1.23
PKD1-223ENST00000561668 SH3RF3Q8TEJ3 882 aaPredicted RBP22.71■■□□□ 1.23
PKD1-223ENST00000561668 DDX4Q9NQI0 724 aaKnown RBP22.71■■□□□ 1.23
PKD1-223ENST00000561668 ZNF112Q9UJU3 913 aa22.71■■□□□ 1.23
PKD1-223ENST00000561668 NDUFB9Q9Y6M9 179 aa22.71■■□□□ 1.23
PKD1-223ENST00000561668 DDTLA6NHG4 134 aaPredicted RBP22.7■■□□□ 1.22
PKD1-223ENST00000561668 IGHDP01880 384 aa22.7■■□□□ 1.22
PKD1-223ENST00000561668 INPP5BP32019 993 aa22.7■■□□□ 1.22
PKD1-223ENST00000561668 MAGEB6Q8N7X4 407 aa22.7■■□□□ 1.22
PKD1-223ENST00000561668 CNKSR2Q8WXI2 1034 aa22.7■■□□□ 1.22
PKD1-223ENST00000561668 DNAJC2Q99543 621 aaKnown RBP22.7■■□□□ 1.22
PKD1-223ENST00000561668 ANTXR1Q9H6X2 564 aa22.7■■□□□ 1.22
PKD1-223ENST00000561668 SNCAIPQ9Y6H5 919 aa22.7■■□□□ 1.22
PKD1-223ENST00000561668 PPATQ06203 517 aa22.69■■□□□ 1.22
PKD1-223ENST00000561668 SALL3Q9BXA9 1300 aa22.68■■□□□ 1.22
PKD1-223ENST00000561668 CCL15-CCL14A0A0B4J2E2 113 aa22.68■■□□□ 1.22
PKD1-223ENST00000561668 CETPP11597 493 aa22.68■■□□□ 1.22
PKD1-223ENST00000561668 SNAPC2Q13487 334 aa22.68■■□□□ 1.22
PKD1-223ENST00000561668 CCL15Q16663 113 aa22.68■■□□□ 1.22
PKD1-223ENST00000561668 SH3BP5LQ7L8J4 393 aa22.68■■□□□ 1.22
PKD1-223ENST00000561668 TGFBRAP1Q8WUH2 860 aa22.68■■□□□ 1.22
PKD1-223ENST00000561668 OSBPL5Q9H0X9 879 aaPredicted RBP22.68■■□□□ 1.22
PKD1-223ENST00000561668 DHX36Q9H2U1 1008 aaKnown RBP22.68■■□□□ 1.22
PKD1-223ENST00000561668 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.68■■□□□ 1.22
PKD1-223ENST00000561668 PICK1Q9NRD5 415 aa22.68■■□□□ 1.22
PKD1-223ENST00000561668 CASP8AP2Q9UKL3 1982 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 TESPA1A2RU30 521 aaPredicted RBP22.67■■□□□ 1.22
PKD1-223ENST00000561668 GOLIM4O00461 696 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 CAPN15O75808 1086 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 IRX6P78412 446 aaPredicted RBP22.67■■□□□ 1.22
PKD1-223ENST00000561668 PPIL2Q13356 520 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 DGKZQ13574 1117 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 ADGRA1Q86SQ6 560 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 GPATCH3Q96I76 525 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 MS4A4AQ96JQ5 239 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 CFHR5Q9BXR6 569 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 BOLA2Q9H3K6 86 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 ZBTB47Q9UFB7 747 aaPredicted RBP22.67■■□□□ 1.22
PKD1-223ENST00000561668 OTOFQ9HC10 1997 aa22.67■■□□□ 1.22
PKD1-223ENST00000561668 RFX7Q2KHR2 1363 aa22.66■■□□□ 1.22
PKD1-223ENST00000561668 GPR25O00155 361 aa22.66■■□□□ 1.22
PKD1-223ENST00000561668 IGF2BP3O00425 579 aaKnown RBP eCLIP22.66■■□□□ 1.22
PKD1-223ENST00000561668 TBC1D12O60347 775 aa22.66■■□□□ 1.22
PKD1-223ENST00000561668 MAP3K10Q02779 954 aa22.66■■□□□ 1.22
PKD1-223ENST00000561668 SLC9C2Q5TAH2 1124 aa22.66■■□□□ 1.22
PKD1-223ENST00000561668 MIGA1Q8NAN2 632 aa22.66■■□□□ 1.22
PKD1-223ENST00000561668 TRIM34Q9BYJ4 488 aa22.66■■□□□ 1.22
PKD1-223ENST00000561668 PI4KBQ9UBF8 816 aa22.66■■□□□ 1.22
PKD1-223ENST00000561668 ATRNL1Q5VV63 1379 aa22.65■■□□□ 1.22
PKD1-223ENST00000561668 IRF6O14896 467 aa22.65■■□□□ 1.22
PKD1-223ENST00000561668 CTNND1O60716 968 aaKnown RBP22.65■■□□□ 1.22
PKD1-223ENST00000561668 USP5P45974 858 aa22.65■■□□□ 1.22
PKD1-223ENST00000561668 NOM1Q5C9Z4 860 aaKnown RBP22.65■■□□□ 1.22
PKD1-223ENST00000561668 NOL9Q5SY16 702 aaKnown RBP22.65■■□□□ 1.22
PKD1-223ENST00000561668 HAUS7Q99871 368 aa22.65■■□□□ 1.22
PKD1-223ENST00000561668 ECHDC1Q9NTX5 307 aa22.65■■□□□ 1.22
PKD1-223ENST00000561668 PAG1Q9NWQ8 432 aa22.65■■□□□ 1.22
PKD1-223ENST00000561668 DOCK2Q92608 1830 aa22.65■■□□□ 1.22
PKD1-223ENST00000561668 MAST2Q6P0Q8 1798 aa22.64■■□□□ 1.22
PKD1-223ENST00000561668 PHF20L1A8MW92 1017 aa22.64■■□□□ 1.21
PKD1-223ENST00000561668 FKTNO75072 461 aa22.64■■□□□ 1.21
PKD1-223ENST00000561668 DYNLL1P63167 89 aaKnown RBP22.64■■□□□ 1.21
PKD1-223ENST00000561668 MAPKAPK5Q8IW41 473 aa22.64■■□□□ 1.21
PKD1-223ENST00000561668 SCYL3Q8IZE3 742 aa22.64■■□□□ 1.21
PKD1-223ENST00000561668 ZNF296Q8WUU4 475 aaPredicted RBP22.64■■□□□ 1.21
PKD1-223ENST00000561668 PTPN18Q99952 460 aa22.64■■□□□ 1.21
PKD1-223ENST00000561668 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.64■■□□□ 1.219e-7■■■■□ 23.6
PKD1-223ENST00000561668 TTC41PQ6P2S7 1318 aa22.63■■□□□ 1.21
PKD1-223ENST00000561668 MYO5AQ9Y4I1 1855 aaKnown RBP22.63■■□□□ 1.21
PKD1-223ENST00000561668 MAGEB6P1A0A0J9YX57 407 aa22.63■■□□□ 1.21
PKD1-223ENST00000561668 ANKRD45Q5TZF3 282 aa22.63■■□□□ 1.21
PKD1-223ENST00000561668 BRI3BPQ8WY22 251 aa22.63■■□□□ 1.21
PKD1-223ENST00000561668 HERC5Q9UII4 1024 aaKnown RBP22.63■■□□□ 1.21
PKD1-223ENST00000561668 HLA-DOAP06340 250 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms