RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 PTPN11Q06124 597 aaPredicted RBP8.02□□□□□ -1.13
USP8-218ENST00000561330 LDLRAD1Q5T700 205 aa8.02□□□□□ -1.13
USP8-218ENST00000561330 PAOXQ6QHF9 649 aa8.02□□□□□ -1.13
USP8-218ENST00000561330 TRIM42Q8IWZ5 723 aa8.02□□□□□ -1.13
USP8-218ENST00000561330 GAL3ST3Q96A11 431 aa8.02□□□□□ -1.13
USP8-218ENST00000561330 C7orf69Q9H7B7 122 aa8.02□□□□□ -1.13
USP8-218ENST00000561330 DISC1Q9NRI5 854 aa8.02□□□□□ -1.13
USP8-218ENST00000561330 GGT7Q9UJ14 662 aa8.02□□□□□ -1.13
USP8-218ENST00000561330 HMX2A2RU54 273 aa8.01□□□□□ -1.13
USP8-218ENST00000561330 UNCXA6NJT0 531 aa8.01□□□□□ -1.13
USP8-218ENST00000561330 GBP2P32456 591 aaPredicted RBP8.01□□□□□ -1.13
USP8-218ENST00000561330 ERVK-24P63145 666 aa8.01□□□□□ -1.13
USP8-218ENST00000561330 SEPT6Q14141 434 aa8.01□□□□□ -1.13
USP8-218ENST00000561330 DIEXFQ68CQ4 756 aaKnown RBP8.01□□□□□ -1.13
USP8-218ENST00000561330 HS2ST1Q7LGA3 356 aa8.01□□□□□ -1.13
USP8-218ENST00000561330 EZH1Q92800 747 aaPredicted RBP8.01□□□□□ -1.13
USP8-218ENST00000561330 TMEM74Q96NL1 305 aa8.01□□□□□ -1.13
USP8-218ENST00000561330 DCDC2CA8MYV0 355 aa8□□□□□ -1.13
USP8-218ENST00000561330 ADAM23O75077 832 aa8□□□□□ -1.13
USP8-218ENST00000561330 NFICP08651 508 aa8□□□□□ -1.13
USP8-218ENST00000561330 FSTP19883 344 aa8□□□□□ -1.13
USP8-218ENST00000561330 ZNF76P36508 570 aa8□□□□□ -1.13
USP8-218ENST00000561330 MAP7Q14244 749 aa8□□□□□ -1.13
USP8-218ENST00000561330 NFKBIBQ15653 356 aa8□□□□□ -1.13
USP8-218ENST00000561330 ERMP1Q7Z2K6 904 aa8□□□□□ -1.13
USP8-218ENST00000561330 ELMO3Q96BJ8 720 aa8□□□□□ -1.13
USP8-218ENST00000561330 ACSS3Q9H6R3 686 aa8□□□□□ -1.13
USP8-218ENST00000561330 PICK1Q9NRD5 415 aa8□□□□□ -1.13
USP8-218ENST00000561330 KBTBD4Q9NVX7 518 aa8□□□□□ -1.13
USP8-218ENST00000561330 KIAA1522Q9P206 1035 aaPredicted RBP8□□□□□ -1.13
USP8-218ENST00000561330 CSADQ9Y600 493 aa8□□□□□ -1.13
USP8-218ENST00000561330 MINDY4BA8MYZ0 360 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 GSC2O15499 205 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 RNGTTO60942 597 aaKnown RBP7.99□□□□□ -1.13
USP8-218ENST00000561330 RECKO95980 971 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 LMNB2Q03252 620 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 CAMK2GQ13555 558 aaPredicted RBP7.99□□□□□ -1.13
USP8-218ENST00000561330 TTLL4Q14679 1199 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 PRSS36Q5K4E3 855 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 RNF43Q68DV7 783 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 HDXQ7Z353 690 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 C12orf40Q86WS4 652 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 SMYD4Q8IYR2 804 aaPredicted RBP7.99□□□□□ -1.13
USP8-218ENST00000561330 JARID2Q92833 1246 aaPredicted RBP7.99□□□□□ -1.13
USP8-218ENST00000561330 COPRSQ9NQ92 184 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 METTL5Q9NRN9 209 aaKnown RBP7.99□□□□□ -1.13
USP8-218ENST00000561330 DAGLAQ9Y4D2 1042 aa7.99□□□□□ -1.13
USP8-218ENST00000561330 SCAMP3O14828 347 aaKnown RBP7.98□□□□□ -1.13
USP8-218ENST00000561330 PF4P02776 101 aa7.98□□□□□ -1.13
USP8-218ENST00000561330 HCLS1P14317 486 aaPredicted RBP7.98□□□□□ -1.13
USP8-218ENST00000561330 INPP5AQ14642 412 aa7.98□□□□□ -1.13
USP8-218ENST00000561330 PPM1JQ5JR12 505 aa7.98□□□□□ -1.13
USP8-218ENST00000561330 LRFN4Q6PJG9 635 aa7.98□□□□□ -1.13
USP8-218ENST00000561330 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.98□□□□□ -1.13
USP8-218ENST00000561330 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
USP8-218ENST00000561330 RNF214Q8ND24 703 aa7.98□□□□□ -1.13
USP8-218ENST00000561330 PLPPR2Q96GM1 343 aa7.98□□□□□ -1.13
USP8-218ENST00000561330 SEMA6CQ9H3T2 930 aa7.98□□□□□ -1.13
USP8-218ENST00000561330 SNCAIPQ9Y6H5 919 aa7.98□□□□□ -1.13
USP8-218ENST00000561330 FANCGO15287 622 aa7.97□□□□□ -1.13
USP8-218ENST00000561330 IGLV1-40P01703 118 aa7.97□□□□□ -1.13
USP8-218ENST00000561330 NFIAQ12857 509 aa7.97□□□□□ -1.13
USP8-218ENST00000561330 WIPI1Q5MNZ9 446 aaPredicted RBP7.97□□□□□ -1.13
USP8-218ENST00000561330 RHOVQ96L33 236 aa7.97□□□□□ -1.13
USP8-218ENST00000561330 SSU72Q9NP77 194 aaKnown RBP7.97□□□□□ -1.13
USP8-218ENST00000561330 NEFMP07197 916 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 FANCCQ00597 558 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 FAM160A1Q05DH4 1040 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 SNAP47Q5SQN1 464 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 RNF34Q969K3 372 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 ISL2Q96A47 359 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 ZNF428Q96B54 188 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 DBNDD2Q9BQY9 259 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 LGR6Q9HBX8 967 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 PCOLCE2Q9UKZ9 415 aa7.96□□□□□ -1.14
USP8-218ENST00000561330 PRAMEF27A3QJZ7 478 aa7.95□□□□□ -1.14
USP8-218ENST00000561330 CDK8P49336 464 aa7.95□□□□□ -1.14
USP8-218ENST00000561330 RBM25P49756 843 aaKnown RBP7.95□□□□□ -1.14
USP8-218ENST00000561330 RING1Q06587 406 aa7.95□□□□□ -1.14
USP8-218ENST00000561330 ZBTB37Q5TC79 503 aa7.95□□□□□ -1.14
USP8-218ENST00000561330 BNC2Q6ZN30 1099 aaPredicted RBP7.95□□□□□ -1.14
USP8-218ENST00000561330 CYFIP1Q7L576 1253 aa7.95□□□□□ -1.14
USP8-218ENST00000561330 GOLM1Q8NBJ4 401 aa7.95□□□□□ -1.14
USP8-218ENST00000561330 PRKAG2Q9UGJ0 569 aa7.95□□□□□ -1.14
USP8-218ENST00000561330 DYNC1LI2O43237 492 aaPredicted RBP7.94□□□□□ -1.14
USP8-218ENST00000561330 BPNT1O95861 308 aa7.94□□□□□ -1.14
USP8-218ENST00000561330 ITGB7P26010 798 aa7.94□□□□□ -1.14
USP8-218ENST00000561330 EIF4A3P38919 411 aaKnown RBP7.94□□□□□ -1.14
USP8-218ENST00000561330 RPL6Q02878 288 aaKnown RBP7.94□□□□□ -1.14
USP8-218ENST00000561330 CDC37L1Q7L3B6 337 aa7.94□□□□□ -1.14
USP8-218ENST00000561330 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP8-218ENST00000561330 FBXL6Q8N531 539 aa7.94□□□□□ -1.14
USP8-218ENST00000561330 GIMAP7Q8NHV1 300 aa7.94□□□□□ -1.14
USP8-218ENST00000561330 ZNF507Q8TCN5 953 aa7.94□□□□□ -1.14
USP8-218ENST00000561330 GATAD2BQ8WXI9 593 aa7.94□□□□□ -1.14
USP8-218ENST00000561330 MFSD14AQ96MC6 490 aa7.94□□□□□ -1.14
USP8-218ENST00000561330 GFRA2O00451 464 aa7.93□□□□□ -1.14
USP8-218ENST00000561330 CILPO75339 1184 aa7.93□□□□□ -1.14
USP8-218ENST00000561330 F13A1P00488 732 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms