RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 AK9Q5TCS8 1911 aa19.99■□□□□ 0.79
SNX1-213ENST00000561026 ANKRD23Q86SG2 305 aa19.98■□□□□ 0.79
SNX1-213ENST00000561026 SSH3Q8TE77 659 aa19.98■□□□□ 0.79
SNX1-213ENST00000561026 ARMC5Q96C12 935 aa19.98■□□□□ 0.79
SNX1-213ENST00000561026 DDTLA6NHG4 134 aaPredicted RBP19.97■□□□□ 0.79
SNX1-213ENST00000561026 UQCRFS1P1P0C7P4 283 aa19.97■□□□□ 0.79
SNX1-213ENST00000561026 RHBDL3P58872 404 aa19.97■□□□□ 0.79
SNX1-213ENST00000561026 GSTO1P78417 241 aa19.97■□□□□ 0.79
SNX1-213ENST00000561026 FTSJ3Q8IY81 847 aaKnown RBP19.97■□□□□ 0.79
SNX1-213ENST00000561026 NSUN4Q96CB9 384 aaKnown RBP19.97■□□□□ 0.79
SNX1-213ENST00000561026 GPR108Q9NPR9 543 aa19.97■□□□□ 0.79
SNX1-213ENST00000561026 BRCA2P51587 3418 aa19.97■□□□□ 0.79
SNX1-213ENST00000561026 PDHXO00330 501 aa19.96■□□□□ 0.79
SNX1-213ENST00000561026 CXCL11O14625 94 aa19.96■□□□□ 0.79
SNX1-213ENST00000561026 ZBTB7BO15156 539 aaPredicted RBP19.96■□□□□ 0.79
SNX1-213ENST00000561026 NPM3O75607 178 aaKnown RBP19.96■□□□□ 0.79
SNX1-213ENST00000561026 LDHCP07864 332 aa19.96■□□□□ 0.79
SNX1-213ENST00000561026 MCAMP43121 646 aa19.96■□□□□ 0.79
SNX1-213ENST00000561026 LACTBP83111 547 aaPredicted RBP19.96■□□□□ 0.79
SNX1-213ENST00000561026 PICALMQ13492 652 aa19.96■□□□□ 0.79
SNX1-213ENST00000561026 MOGSQ13724 837 aa19.96■□□□□ 0.79
SNX1-213ENST00000561026 SCYL3Q8IZE3 742 aa19.96■□□□□ 0.79
SNX1-213ENST00000561026 MKI67P46013 3256 aaKnown RBP19.96■□□□□ 0.79
SNX1-213ENST00000561026 SURF6O75683 361 aaKnown RBP19.95■□□□□ 0.79
SNX1-213ENST00000561026 MAP4K4O95819 1239 aaPredicted RBP19.95■□□□□ 0.79
SNX1-213ENST00000561026 RLBP1P12271 317 aa19.95■□□□□ 0.79
SNX1-213ENST00000561026 KIF22Q14807 665 aa19.95■□□□□ 0.79
SNX1-213ENST00000561026 TNNI3KQ59H18 835 aa19.95■□□□□ 0.79
SNX1-213ENST00000561026 C17orf99Q6UX52 265 aa19.95■□□□□ 0.79
SNX1-213ENST00000561026 ITPRIPQ8IWB1 547 aa19.95■□□□□ 0.79
SNX1-213ENST00000561026 C1orf115Q9H7X2 142 aa19.95■□□□□ 0.79
SNX1-213ENST00000561026 PICK1Q9NRD5 415 aa19.95■□□□□ 0.79
SNX1-213ENST00000561026 RAI14Q9P0K7 980 aa19.95■□□□□ 0.79
SNX1-213ENST00000561026 FPGT-TNNI3KV9GXZ4 949 aa19.95■□□□□ 0.79
SNX1-213ENST00000561026 POTEFA5A3E0 1075 aa19.95■□□□□ 0.78
SNX1-213ENST00000561026 PTPRAP18433 802 aa19.95■□□□□ 0.78
SNX1-213ENST00000561026 OS9Q13438 667 aaPredicted RBP19.95■□□□□ 0.78
SNX1-213ENST00000561026 ARHGAP39Q9C0H5 1083 aa19.95■□□□□ 0.78
SNX1-213ENST00000561026 LRP2BPQ9P2M1 347 aa19.95■□□□□ 0.78
SNX1-213ENST00000561026 PTCH2Q9Y6C5 1203 aa19.95■□□□□ 0.78
SNX1-213ENST00000561026 ZHX2Q9Y6X8 837 aa19.95■□□□□ 0.78
SNX1-213ENST00000561026 CTNND1O60716 968 aaKnown RBP19.94■□□□□ 0.78
SNX1-213ENST00000561026 SLURP2P0DP57 97 aa19.94■□□□□ 0.78
SNX1-213ENST00000561026 DBNDD2Q9BQY9 259 aa19.94■□□□□ 0.78
SNX1-213ENST00000561026 NOP58Q9Y2X3 529 aaKnown RBP19.94■□□□□ 0.78
SNX1-213ENST00000561026 KIAA0100Q14667 2235 aaKnown RBP19.93■□□□□ 0.78
SNX1-213ENST00000561026 TBC1D12O60347 775 aa19.93■□□□□ 0.78
SNX1-213ENST00000561026 GNRH1P01148 92 aa19.93■□□□□ 0.78
SNX1-213ENST00000561026 CCDC158Q5M9N0 1113 aa19.93■□□□□ 0.78
SNX1-213ENST00000561026 GPAT2Q6NUI2 795 aa19.93■□□□□ 0.78
SNX1-213ENST00000561026 NBPF11Q86T75 865 aa19.93■□□□□ 0.78
SNX1-213ENST00000561026 CPA4Q9UI42 421 aa19.93■□□□□ 0.78
SNX1-213ENST00000561026 AFG3L2Q9Y4W6 797 aa19.93■□□□□ 0.78
SNX1-213ENST00000561026 ZBED9Q6R2W3 1325 aa19.92■□□□□ 0.78
SNX1-213ENST00000561026 SLC9C1Q4G0N8 1177 aa19.92■□□□□ 0.78
SNX1-213ENST00000561026 TTC39AQ5SRH9 613 aa19.92■□□□□ 0.78
SNX1-213ENST00000561026 ZNF333Q96JL9 665 aa19.92■□□□□ 0.78
SNX1-213ENST00000561026 SNRKQ9NRH2 765 aa19.92■□□□□ 0.78
SNX1-213ENST00000561026 ADGRA2Q96PE1 1338 aa19.92■□□□□ 0.78
SNX1-213ENST00000561026 DOCK2Q92608 1830 aa19.91■□□□□ 0.78
SNX1-213ENST00000561026 A0A0G2JLL6 359 aaPredicted RBP19.91■□□□□ 0.78
SNX1-213ENST00000561026 PRPF38BQ5VTL8 546 aaKnown RBP19.91■□□□□ 0.78
SNX1-213ENST00000561026 FASTKD5Q7L8L6 764 aaKnown RBP19.91■□□□□ 0.78
SNX1-213ENST00000561026 PRRT2Q7Z6L0 340 aaPredicted RBP19.91■□□□□ 0.78
SNX1-213ENST00000561026 ZNF512BQ96KM6 892 aaPredicted RBP19.91■□□□□ 0.78
SNX1-213ENST00000561026 PRMT2P55345 433 aa19.9■□□□□ 0.78
SNX1-213ENST00000561026 PARK7Q99497 189 aaKnown RBP19.9■□□□□ 0.78
SNX1-213ENST00000561026 OSBPL5Q9H0X9 879 aaPredicted RBP19.9■□□□□ 0.78
SNX1-213ENST00000561026 CYP2C8P10632 490 aa19.89■□□□□ 0.77
SNX1-213ENST00000561026 CTGFP29279 349 aa19.89■□□□□ 0.77
SNX1-213ENST00000561026 PSMC4P43686 418 aa19.89■□□□□ 0.77
SNX1-213ENST00000561026 NAA16Q6N069 864 aaPredicted RBP19.89■□□□□ 0.77
SNX1-213ENST00000561026 TEX11Q8IYF3 940 aa19.89■□□□□ 0.77
SNX1-213ENST00000561026 TMEM106CQ9BVX2 250 aa19.89■□□□□ 0.77
SNX1-213ENST00000561026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.89■□□□□ 0.774e-8■■■■■ 48
SNX1-213ENST00000561026 COL2A1P02458 1487 aaPredicted RBP19.89■□□□□ 0.77
SNX1-213ENST00000561026 BAG3O95817 575 aa19.88■□□□□ 0.77
SNX1-213ENST00000561026 CYP2E1P05181 493 aaPredicted RBP19.88■□□□□ 0.77
SNX1-213ENST00000561026 EN2P19622 333 aaPredicted RBP19.88■□□□□ 0.77
SNX1-213ENST00000561026 SH3RF3Q8TEJ3 882 aaPredicted RBP19.88■□□□□ 0.77
SNX1-213ENST00000561026 TRIM47Q96LD4 638 aa19.88■□□□□ 0.77
SNX1-213ENST00000561026 NOL10Q9BSC4 688 aaKnown RBP19.88■□□□□ 0.77
SNX1-213ENST00000561026 DBNLQ9UJU6 430 aaKnown RBP19.88■□□□□ 0.77
SNX1-213ENST00000561026 TRIM75PA6NK02 468 aa19.87■□□□□ 0.77
SNX1-213ENST00000561026 FAM196BA6NMK8 535 aa19.87■□□□□ 0.77
SNX1-213ENST00000561026 IGSF3O75054 1194 aa19.87■□□□□ 0.77
SNX1-213ENST00000561026 ECM2O94769 699 aaPredicted RBP19.87■□□□□ 0.77
SNX1-213ENST00000561026 SLC34A2O95436 690 aa19.87■□□□□ 0.77
SNX1-213ENST00000561026 BCRP11274 1271 aa19.87■□□□□ 0.77
SNX1-213ENST00000561026 PPP4CP60510 307 aa19.87■□□□□ 0.77
SNX1-213ENST00000561026 CEP85Q6P2H3 762 aa19.87■□□□□ 0.77
SNX1-213ENST00000561026 PANK1Q8TE04 598 aa19.87■□□□□ 0.77
SNX1-213ENST00000561026 EAF2Q96CJ1 260 aaPredicted RBP19.87■□□□□ 0.77
SNX1-213ENST00000561026 AATFQ9NY61 560 aaKnown RBP eCLIP19.87■□□□□ 0.77
SNX1-213ENST00000561026 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.87■□□□□ 0.77
SNX1-213ENST00000561026 SLC45A1Q9Y2W3 748 aa19.87■□□□□ 0.77
SNX1-213ENST00000561026 FMNL1O95466 1100 aaPredicted RBP19.86■□□□□ 0.77
SNX1-213ENST00000561026 PLCG2P16885 1265 aa19.86■□□□□ 0.77
SNX1-213ENST00000561026 HOXD10P28358 340 aa19.86■□□□□ 0.77
SNX1-213ENST00000561026 ZAP70P43403 619 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms