RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 ZHX2Q9Y6X8 837 aa22.82■■□□□ 1.24
TPM1-224ENST00000560615 GPR75-ASB3A0A0A6YYF3 556 aa22.81■■□□□ 1.24
TPM1-224ENST00000560615 CTNND1O60716 968 aaKnown RBP22.81■■□□□ 1.24
TPM1-224ENST00000560615 NPM3O75607 178 aaKnown RBP22.81■■□□□ 1.24
TPM1-224ENST00000560615 FMNL1O95466 1100 aaPredicted RBP22.81■■□□□ 1.24
TPM1-224ENST00000560615 PSMC4P43686 418 aa22.81■■□□□ 1.24
TPM1-224ENST00000560615 MECOMQ03112 1051 aa22.81■■□□□ 1.24
TPM1-224ENST00000560615 ZFPM1Q8IX07 1006 aa22.81■■□□□ 1.24
TPM1-224ENST00000560615 CLUAP1Q96AJ1 413 aa22.81■■□□□ 1.24
TPM1-224ENST00000560615 BCAR3O75815 825 aa22.8■■□□□ 1.24
TPM1-224ENST00000560615 EN2P19622 333 aaPredicted RBP22.8■■□□□ 1.24
TPM1-224ENST00000560615 CAP1Q01518 475 aa22.8■■□□□ 1.24
TPM1-224ENST00000560615 MAP3K10Q02779 954 aa22.8■■□□□ 1.24
TPM1-224ENST00000560615 RAI14Q9P0K7 980 aa22.8■■□□□ 1.24
TPM1-224ENST00000560615 HMG20BQ9P0W2 317 aa22.8■■□□□ 1.24
TPM1-224ENST00000560615 PDE4DIPQ5VU43 2346 aa22.8■■□□□ 1.24
TPM1-224ENST00000560615 PHF20L1A8MW92 1017 aa22.79■■□□□ 1.24
TPM1-224ENST00000560615 PTPRAP18433 802 aa22.79■■□□□ 1.24
TPM1-224ENST00000560615 OS9Q13438 667 aaPredicted RBP22.79■■□□□ 1.24
TPM1-224ENST00000560615 RAET1EQ8TD07 263 aa22.79■■□□□ 1.24
TPM1-224ENST00000560615 ARHGAP39Q9C0H5 1083 aa22.79■■□□□ 1.24
TPM1-224ENST00000560615 PCDH10Q9P2E7 1040 aa22.79■■□□□ 1.24
TPM1-224ENST00000560615 LRP2BPQ9P2M1 347 aa22.79■■□□□ 1.24
TPM1-224ENST00000560615 SRRDQ9UH36 339 aa22.79■■□□□ 1.24
TPM1-224ENST00000560615 A0A0G2JLL6 359 aaPredicted RBP22.78■■□□□ 1.24
TPM1-224ENST00000560615 TBC1D12O60347 775 aa22.78■■□□□ 1.24
TPM1-224ENST00000560615 ARID4AP29374 1257 aaPredicted RBP22.78■■□□□ 1.24
TPM1-224ENST00000560615 FCGRTP55899 365 aa22.78■■□□□ 1.24
TPM1-224ENST00000560615 CCDC158Q5M9N0 1113 aa22.78■■□□□ 1.24
TPM1-224ENST00000560615 PRRT2Q7Z6L0 340 aaPredicted RBP22.78■■□□□ 1.24
TPM1-224ENST00000560615 SLC45A1Q9Y2W3 748 aa22.78■■□□□ 1.24
TPM1-224ENST00000560615 DDTLA6NHG4 134 aaPredicted RBP22.77■■□□□ 1.24
TPM1-224ENST00000560615 IGSF3O75054 1194 aa22.77■■□□□ 1.24
TPM1-224ENST00000560615 GADL1Q6ZQY3 521 aa22.77■■□□□ 1.24
TPM1-224ENST00000560615 FTSJ3Q8IY81 847 aaKnown RBP22.77■■□□□ 1.24
TPM1-224ENST00000560615 NSUN4Q96CB9 384 aaKnown RBP22.77■■□□□ 1.24
TPM1-224ENST00000560615 TRIM47Q96LD4 638 aa22.77■■□□□ 1.24
TPM1-224ENST00000560615 TBC1D2Q9BYX2 928 aa22.77■■□□□ 1.24
TPM1-224ENST00000560615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.77■■□□□ 1.24
TPM1-224ENST00000560615 GPR108Q9NPR9 543 aa22.77■■□□□ 1.24
TPM1-224ENST00000560615 AFG3L2Q9Y4W6 797 aa22.77■■□□□ 1.24
TPM1-224ENST00000560615 ATRNL1Q5VV63 1379 aa22.76■■□□□ 1.23
TPM1-224ENST00000560615 TNRC18O15417 2968 aaPredicted RBP22.76■■□□□ 1.23
TPM1-224ENST00000560615 PNMA6EA0A0J9YXQ4 647 aa22.76■■□□□ 1.23
TPM1-224ENST00000560615 BAG3O95817 575 aa22.76■■□□□ 1.23
TPM1-224ENST00000560615 MOGSQ13724 837 aa22.76■■□□□ 1.23
TPM1-224ENST00000560615 SH3BP5LQ7L8J4 393 aa22.76■■□□□ 1.23
TPM1-224ENST00000560615 NKX2-3Q8TAU0 364 aa22.76■■□□□ 1.23
TPM1-224ENST00000560615 SH3TC2Q8TF17 1288 aa22.76■■□□□ 1.23
TPM1-224ENST00000560615 DDX4Q9NQI0 724 aaKnown RBP22.76■■□□□ 1.23
TPM1-224ENST00000560615 AK9Q5TCS8 1911 aa22.76■■□□□ 1.23
TPM1-224ENST00000560615 RFX7Q2KHR2 1363 aa22.76■■□□□ 1.23
TPM1-224ENST00000560615 PLCG2P16885 1265 aa22.75■■□□□ 1.23
TPM1-224ENST00000560615 RHBDL3P58872 404 aa22.75■■□□□ 1.23
TPM1-224ENST00000560615 TTC39AQ5SRH9 613 aa22.75■■□□□ 1.23
TPM1-224ENST00000560615 GPAT2Q6NUI2 795 aa22.75■■□□□ 1.23
TPM1-224ENST00000560615 TMEM57Q8N5G2 664 aa22.75■■□□□ 1.23
TPM1-224ENST00000560615 SMCR8Q8TEV9 937 aaPredicted RBP22.75■■□□□ 1.23
TPM1-224ENST00000560615 OSBPL5Q9H0X9 879 aaPredicted RBP22.75■■□□□ 1.23
TPM1-224ENST00000560615 MYPNQ86TC9 1320 aa22.75■■□□□ 1.23
TPM1-224ENST00000560615 ECM2O94769 699 aaPredicted RBP22.74■■□□□ 1.23
TPM1-224ENST00000560615 MYCP01106 439 aaPredicted RBP22.74■■□□□ 1.23
TPM1-224ENST00000560615 OSBPP22059 807 aa22.74■■□□□ 1.23
TPM1-224ENST00000560615 GRK4P32298 578 aa22.74■■□□□ 1.23
TPM1-224ENST00000560615 UBXN2AP68543 259 aa22.74■■□□□ 1.23
TPM1-224ENST00000560615 BIN2Q9UBW5 565 aaPredicted RBP22.74■■□□□ 1.23
TPM1-224ENST00000560615 PNMA3Q9UL41 463 aa22.74■■□□□ 1.23
TPM1-224ENST00000560615 ADGRA2Q96PE1 1338 aa22.74■■□□□ 1.23
TPM1-224ENST00000560615 CYP2C8P10632 490 aa22.73■■□□□ 1.23
TPM1-224ENST00000560615 ATP8B2P98198 1209 aa22.73■■□□□ 1.23
TPM1-224ENST00000560615 TBC1D9Q6ZT07 1266 aa22.73■■□□□ 1.23
TPM1-224ENST00000560615 TEX11Q8IYF3 940 aa22.73■■□□□ 1.23
TPM1-224ENST00000560615 TRIM75PA6NK02 468 aa22.72■■□□□ 1.23
TPM1-224ENST00000560615 SURF6O75683 361 aaKnown RBP22.72■■□□□ 1.23
TPM1-224ENST00000560615 BCRP11274 1271 aa22.72■■□□□ 1.23
TPM1-224ENST00000560615 MCAMP43121 646 aa22.72■■□□□ 1.23
TPM1-224ENST00000560615 HNRNPUQ00839 825 aaKnown RBP eCLIP22.72■■□□□ 1.23
TPM1-224ENST00000560615 PABPC4Q13310 644 aaKnown RBP eCLIP22.72■■□□□ 1.23
TPM1-224ENST00000560615 TNNI3KQ59H18 835 aa22.72■■□□□ 1.23
TPM1-224ENST00000560615 NAA16Q6N069 864 aaPredicted RBP22.72■■□□□ 1.23
TPM1-224ENST00000560615 DHX36Q9H2U1 1008 aaKnown RBP22.72■■□□□ 1.23
TPM1-224ENST00000560615 HERC5Q9UII4 1024 aaKnown RBP22.72■■□□□ 1.23
TPM1-224ENST00000560615 FPGT-TNNI3KV9GXZ4 949 aa22.72■■□□□ 1.23
TPM1-224ENST00000560615 MYH2Q9UKX2 1941 aa22.71■■□□□ 1.23
TPM1-224ENST00000560615 POLA2Q14181 598 aa22.71■■□□□ 1.23
TPM1-224ENST00000560615 PI16Q6UXB8 463 aa22.71■■□□□ 1.23
TPM1-224ENST00000560615 SSH3Q8TE77 659 aa22.71■■□□□ 1.23
TPM1-224ENST00000560615 AS3MTQ9HBK9 375 aa22.71■■□□□ 1.23
TPM1-224ENST00000560615 AGTPBP1Q9UPW5 1226 aa22.71■■□□□ 1.23
TPM1-224ENST00000560615 TNNQ9UQP3 1299 aa22.71■■□□□ 1.23
TPM1-224ENST00000560615 ITPRIPQ8IWB1 547 aa22.7■■□□□ 1.22
TPM1-224ENST00000560615 PROCA1Q8NCQ7 364 aaPredicted RBP22.7■■□□□ 1.22
TPM1-224ENST00000560615 SLAIN1Q8ND83 568 aa22.7■■□□□ 1.22
TPM1-224ENST00000560615 TRIM34Q9BYJ4 488 aa22.7■■□□□ 1.22
TPM1-224ENST00000560615 PI4KBQ9UBF8 816 aa22.7■■□□□ 1.22
TPM1-224ENST00000560615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.7■■□□□ 1.22
TPM1-224ENST00000560615 COL2A1P02458 1487 aaPredicted RBP22.7■■□□□ 1.22
TPM1-224ENST00000560615 RBBP6Q7Z6E9 1792 aaKnown RBP22.7■■□□□ 1.22
TPM1-224ENST00000560615 ZNF384Q8TF68 577 aa22.69■■□□□ 1.22
TPM1-224ENST00000560615 ZNF512BQ96KM6 892 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms