RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 ENTPD3O75355 529 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 MCCP23508 829 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 TDO2P48775 406 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 NFIAQ12857 509 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 SBK1Q52WX2 424 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 MAPKAPK5Q8IW41 473 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 TMOD2Q9NZR1 351 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 FAM198AQ9UFP1 575 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 HACL1Q9UJ83 578 aa16.27■□□□□ 0.2
HMBOX1-213ENST00000560269 COL2A1P02458 1487 aaPredicted RBP16.27■□□□□ 0.19
HMBOX1-213ENST00000560269 CLRN2A0PK11 232 aa16.26■□□□□ 0.19
HMBOX1-213ENST00000560269 IQCA1LA6NCM1 817 aa16.26■□□□□ 0.19
HMBOX1-213ENST00000560269 SLC27A2O14975 620 aa16.26■□□□□ 0.19
HMBOX1-213ENST00000560269 CYP21A2P08686 494 aa16.26■□□□□ 0.19
HMBOX1-213ENST00000560269 HIRAP54198 1017 aaPredicted RBP16.26■□□□□ 0.19
HMBOX1-213ENST00000560269 RNF20Q5VTR2 975 aa16.26■□□□□ 0.19
HMBOX1-213ENST00000560269 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
HMBOX1-213ENST00000560269 IL17RAQ96F46 866 aa16.26■□□□□ 0.19
HMBOX1-213ENST00000560269 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
HMBOX1-213ENST00000560269 POTECB2RU33 542 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 USP17L12C9JPN9 530 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 USP17L21D6R901 530 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 CACNB3P54284 484 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 ANAPC15P60006 121 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 PICALMQ13492 652 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 IMMTQ16891 758 aaKnown RBP16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 TSGA10IPQ3SY00 556 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 USP50Q70EL3 339 aaPredicted RBP16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 OSBPL5Q9H0X9 879 aaPredicted RBP16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 MCM9Q9NXL9 1143 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 CNTNAP1P78357 1384 aa16.25■□□□□ 0.19
HMBOX1-213ENST00000560269 ZNF213O14771 459 aa16.24■□□□□ 0.19
HMBOX1-213ENST00000560269 EPHX2P34913 555 aa16.24■□□□□ 0.19
HMBOX1-213ENST00000560269 C12orf60Q5U649 245 aa16.24■□□□□ 0.19
HMBOX1-213ENST00000560269 FAM83AQ86UY5 434 aa16.24■□□□□ 0.19
HMBOX1-213ENST00000560269 RASEFQ8IZ41 740 aa16.24■□□□□ 0.19
HMBOX1-213ENST00000560269 TAF1DQ9H5J8 278 aaPredicted RBP16.24■□□□□ 0.19
HMBOX1-213ENST00000560269 PALD1Q9ULE6 856 aa16.24■□□□□ 0.19
HMBOX1-213ENST00000560269 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
HMBOX1-213ENST00000560269 ATRNL1Q5VV63 1379 aa16.24■□□□□ 0.19
HMBOX1-213ENST00000560269 ASTN2O75129 1339 aaPredicted RBP16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 TCP10L2B9ZVM9 353 aa16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 ZKSCAN1P17029 563 aaPredicted RBP16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 PPARAQ07869 468 aa16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 ZFPM1Q8IX07 1006 aa16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 AMOTL1Q8IY63 956 aa16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 FAM151AQ8WW52 585 aa16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 NBPF3Q9H094 633 aa16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 DHX36Q9H2U1 1008 aaKnown RBP16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 VEZTQ9HBM0 779 aa16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 SAP30BPQ9UHR5 308 aaKnown RBP16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 TAF6LQ9Y6J9 622 aa16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 ROBO3Q96MS0 1386 aa16.23■□□□□ 0.19
HMBOX1-213ENST00000560269 PITPNM2Q9BZ72 1349 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 SIPA1L1O43166 1804 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 POLR3DP05423 398 aaPredicted RBP16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 CYP2D6P10635 497 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 TNNI2P48788 182 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 HAND2P61296 217 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 TCP10Q12799 353 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 TNFAIP1Q13829 316 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 TTC6Q86TZ1 520 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 APOBEC3FQ8IUX4 373 aaKnown RBP16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 ZC3H15Q8WU90 426 aaKnown RBP16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 PGAP2Q9UHJ9 254 aa16.22■□□□□ 0.19
HMBOX1-213ENST00000560269 CYP2D7A0A087X1C5 515 aa16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 PLCD1P51178 756 aa16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 KRT32Q14532 448 aa16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 ANGEL2Q5VTE6 544 aaKnown RBP16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 SH3BP5LQ7L8J4 393 aa16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 PNMA8AQ86V59 439 aaPredicted RBP16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 TBC1D10CQ8IV04 446 aa16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 KIF2CQ99661 725 aa16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 GGA3Q9NZ52 723 aa16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 TAOK2Q9UL54 1235 aa16.21■□□□□ 0.19
HMBOX1-213ENST00000560269 DDTLA6NHG4 134 aaPredicted RBP16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 FGRP09769 529 aa16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 PCP11498 1178 aaKnown RBP16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 VEGFAP15692 232 aaPredicted RBP16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 EVX2Q03828 476 aa16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 CTDSPL2Q05D32 466 aa16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 AKNAD1Q5T1N1 836 aa16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 STOX1Q6ZVD7 989 aa16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 STAG1Q8WVM7 1258 aa16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 EHD4Q9H223 541 aa16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 TACC3Q9Y6A5 838 aa16.2■□□□□ 0.18
HMBOX1-213ENST00000560269 E7EWF7 191 aa16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 SMIM22K7EJ46 135 aa16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 SLC3A2P08195 630 aaKnown RBP16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 RASA3Q14644 834 aa16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 METTL16Q86W50 562 aaKnown RBP16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 TM6SF1Q9BZW5 370 aa16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 RNF41Q9H4P4 317 aaPredicted RBP16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 PI4KBQ9UBF8 816 aa16.19■□□□□ 0.18
HMBOX1-213ENST00000560269 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms