RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 FKTNO75072 461 aa21.53■■□□□ 1.04
SMAD3-210ENST00000559092 RAB11FIP3O75154 756 aa21.53■■□□□ 1.04
SMAD3-210ENST00000559092 PPIL2Q13356 520 aa21.53■■□□□ 1.04
SMAD3-210ENST00000559092 PKN2Q16513 984 aaKnown RBP21.53■■□□□ 1.04
SMAD3-210ENST00000559092 NOL9Q5SY16 702 aaKnown RBP21.53■■□□□ 1.04
SMAD3-210ENST00000559092 NAA16Q6N069 864 aaPredicted RBP21.53■■□□□ 1.04
SMAD3-210ENST00000559092 AACSQ86V21 672 aa21.53■■□□□ 1.04
SMAD3-210ENST00000559092 ZSCAN29Q8IWY8 852 aaPredicted RBP21.53■■□□□ 1.04
SMAD3-210ENST00000559092 KIF1BPQ96EK5 621 aa21.53■■□□□ 1.04
SMAD3-210ENST00000559092 TLR7Q9NYK1 1049 aaKnown RBP21.53■■□□□ 1.04
SMAD3-210ENST00000559092 AKAP11Q9UKA4 1901 aa21.53■■□□□ 1.04
SMAD3-210ENST00000559092 BAG3O95817 575 aa21.52■■□□□ 1.04
SMAD3-210ENST00000559092 CETPP11597 493 aa21.52■■□□□ 1.04
SMAD3-210ENST00000559092 ZAP70P43403 619 aa21.52■■□□□ 1.04
SMAD3-210ENST00000559092 TMED8Q6PL24 325 aaPredicted RBP21.52■■□□□ 1.04
SMAD3-210ENST00000559092 SH3BP5LQ7L8J4 393 aa21.52■■□□□ 1.04
SMAD3-210ENST00000559092 CLASRPQ8N2M8 674 aaKnown RBP21.52■■□□□ 1.04
SMAD3-210ENST00000559092 BRI3BPQ8WY22 251 aa21.52■■□□□ 1.04
SMAD3-210ENST00000559092 NOL10Q9BSC4 688 aaKnown RBP21.52■■□□□ 1.04
SMAD3-210ENST00000559092 R3HDMLQ9H3Y0 253 aa21.52■■□□□ 1.04
SMAD3-210ENST00000559092 DDX4Q9NQI0 724 aaKnown RBP21.52■■□□□ 1.04
SMAD3-210ENST00000559092 ATRNL1Q5VV63 1379 aa21.51■■□□□ 1.03
SMAD3-210ENST00000559092 CCL15-CCL14A0A0B4J2E2 113 aa21.51■■□□□ 1.03
SMAD3-210ENST00000559092 PLCG2P16885 1265 aa21.51■■□□□ 1.03
SMAD3-210ENST00000559092 INPP5BP32019 993 aa21.51■■□□□ 1.03
SMAD3-210ENST00000559092 PPP4CP60510 307 aa21.51■■□□□ 1.03
SMAD3-210ENST00000559092 SNAPC2Q13487 334 aa21.51■■□□□ 1.03
SMAD3-210ENST00000559092 PICALMQ13492 652 aa21.51■■□□□ 1.03
SMAD3-210ENST00000559092 CCL15Q16663 113 aa21.51■■□□□ 1.03
SMAD3-210ENST00000559092 C20orf194Q5TEA3 1177 aa21.51■■□□□ 1.03
SMAD3-210ENST00000559092 PHF20L1A8MW92 1017 aa21.5■■□□□ 1.03
SMAD3-210ENST00000559092 IRF6O14896 467 aa21.5■■□□□ 1.03
SMAD3-210ENST00000559092 TBC1D12O60347 775 aa21.5■■□□□ 1.03
SMAD3-210ENST00000559092 ZCCHC17Q9NP64 241 aaKnown RBP21.5■■□□□ 1.03
SMAD3-210ENST00000559092 CASP8AP2Q9UKL3 1982 aa21.5■■□□□ 1.03
SMAD3-210ENST00000559092 DDTLA6NHG4 134 aaPredicted RBP21.49■■□□□ 1.03
SMAD3-210ENST00000559092 CCDC85CA6NKD9 419 aa21.49■■□□□ 1.03
SMAD3-210ENST00000559092 CRHR2Q13324 411 aa21.49■■□□□ 1.03
SMAD3-210ENST00000559092 IL1RAPL2Q9NP60 686 aa21.49■■□□□ 1.03
SMAD3-210ENST00000559092 PIH1D3Q9NQM4 214 aaKnown RBP21.49■■□□□ 1.03
SMAD3-210ENST00000559092 TEX11Q8IYF3 940 aa21.48■■□□□ 1.03
SMAD3-210ENST00000559092 CTNND1O60716 968 aaKnown RBP21.47■■□□□ 1.03
SMAD3-210ENST00000559092 IFIT2P09913 472 aaKnown RBP21.47■■□□□ 1.03
SMAD3-210ENST00000559092 CERS3Q8IU89 383 aa21.47■■□□□ 1.03
SMAD3-210ENST00000559092 OSBPL5Q9H0X9 879 aaPredicted RBP21.47■■□□□ 1.03
SMAD3-210ENST00000559092 ZFYVE28Q9HCC9 887 aa21.47■■□□□ 1.03
SMAD3-210ENST00000559092 PICK1Q9NRD5 415 aa21.47■■□□□ 1.03
SMAD3-210ENST00000559092 KCNH4Q9UQ05 1017 aa21.47■■□□□ 1.03
SMAD3-210ENST00000559092 MAP3K12Q12852 859 aa21.46■■□□□ 1.03
SMAD3-210ENST00000559092 SCYL3Q8IZE3 742 aa21.46■■□□□ 1.03
SMAD3-210ENST00000559092 SH3RF3Q8TEJ3 882 aaPredicted RBP21.46■■□□□ 1.03
SMAD3-210ENST00000559092 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.46■■□□□ 1.03
SMAD3-210ENST00000559092 DHX36Q9H2U1 1008 aaKnown RBP21.46■■□□□ 1.03
SMAD3-210ENST00000559092 AATFQ9NY61 560 aaKnown RBP eCLIP21.46■■□□□ 1.03
SMAD3-210ENST00000559092 COL2A1P02458 1487 aaPredicted RBP21.45■■□□□ 1.03
SMAD3-210ENST00000559092 CXCL11O14625 94 aa21.45■■□□□ 1.02
SMAD3-210ENST00000559092 IDH1O75874 414 aaKnown RBP21.45■■□□□ 1.02
SMAD3-210ENST00000559092 TTF1Q15361 905 aaPredicted RBP21.45■■□□□ 1.02
SMAD3-210ENST00000559092 FAM43AQ8N2R8 423 aa21.45■■□□□ 1.02
SMAD3-210ENST00000559092 ERO1AQ96HE7 468 aa21.45■■□□□ 1.02
SMAD3-210ENST00000559092 MYH2Q9UKX2 1941 aa21.45■■□□□ 1.02
SMAD3-210ENST00000559092 BTBD19C9JJ37 291 aa21.44■■□□□ 1.02
SMAD3-210ENST00000559092 APBB1O00213 710 aa21.44■■□□□ 1.02
SMAD3-210ENST00000559092 CYP7A1P22680 504 aa21.44■■□□□ 1.02
SMAD3-210ENST00000559092 TAF1CQ15572 869 aaPredicted RBP21.44■■□□□ 1.02
SMAD3-210ENST00000559092 ADGRA1Q86SQ6 560 aa21.44■■□□□ 1.02
SMAD3-210ENST00000559092 PI4KBQ9UBF8 816 aa21.44■■□□□ 1.02
SMAD3-210ENST00000559092 OTOFQ9HC10 1997 aa21.43■■□□□ 1.02
SMAD3-210ENST00000559092 PTPRAP18433 802 aa21.43■■□□□ 1.02
SMAD3-210ENST00000559092 SP3Q02447 781 aa21.43■■□□□ 1.02
SMAD3-210ENST00000559092 FBXO46Q6PJ61 603 aaPredicted RBP21.43■■□□□ 1.02
SMAD3-210ENST00000559092 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.43■■□□□ 1.022e-7■■■□□ 17.3
SMAD3-210ENST00000559092 HERC5Q9UII4 1024 aaKnown RBP21.43■■□□□ 1.02
SMAD3-210ENST00000559092 LAMB1P07942 1786 aa21.42■■□□□ 1.02
SMAD3-210ENST00000559092 ANKRD23Q86SG2 305 aa21.42■■□□□ 1.02
SMAD3-210ENST00000559092 TGFBRAP1Q8WUH2 860 aa21.42■■□□□ 1.02
SMAD3-210ENST00000559092 ANTXR1Q9H6X2 564 aa21.42■■□□□ 1.02
SMAD3-210ENST00000559092 ZHX2Q9Y6X8 837 aa21.42■■□□□ 1.02
SMAD3-210ENST00000559092 TLR2O60603 784 aa21.41■■□□□ 1.02
SMAD3-210ENST00000559092 ARHGEF6Q15052 776 aa21.41■■□□□ 1.02
SMAD3-210ENST00000559092 FOXP4Q8IVH2 680 aaPredicted RBP21.41■■□□□ 1.02
SMAD3-210ENST00000559092 MAGEB6Q8N7X4 407 aa21.41■■□□□ 1.02
SMAD3-210ENST00000559092 LRRCC1Q9C099 1032 aa21.41■■□□□ 1.02
SMAD3-210ENST00000559092 AFG3L2Q9Y4W6 797 aa21.41■■□□□ 1.02
SMAD3-210ENST00000559092 NDUFB9Q9Y6M9 179 aa21.41■■□□□ 1.02
SMAD3-210ENST00000559092 FLT1P17948 1338 aa21.4■■□□□ 1.02
SMAD3-210ENST00000559092 RGS19P49795 217 aa21.4■■□□□ 1.02
SMAD3-210ENST00000559092 FASTKD5Q7L8L6 764 aaKnown RBP21.4■■□□□ 1.02
SMAD3-210ENST00000559092 METTL16Q86W50 562 aaKnown RBP21.4■■□□□ 1.02
SMAD3-210ENST00000559092 HPS5Q9UPZ3 1129 aa21.4■■□□□ 1.02
SMAD3-210ENST00000559092 ATP5JP18859 108 aa21.39■■□□□ 1.01
SMAD3-210ENST00000559092 MOGSQ13724 837 aa21.39■■□□□ 1.01
SMAD3-210ENST00000559092 OTOP1Q7RTM1 612 aa21.39■■□□□ 1.01
SMAD3-210ENST00000559092 MAPKAPK5Q8IW41 473 aa21.39■■□□□ 1.01
SMAD3-210ENST00000559092 TBC1D2Q9BYX2 928 aa21.39■■□□□ 1.01
SMAD3-210ENST00000559092 TRIM17Q9Y577 477 aa21.39■■□□□ 1.01
SMAD3-210ENST00000559092 A0A0G2JLL6 359 aaPredicted RBP21.38■■□□□ 1.01
SMAD3-210ENST00000559092 PDHXO00330 501 aa21.38■■□□□ 1.01
SMAD3-210ENST00000559092 SLURP2P0DP57 97 aa21.38■■□□□ 1.01
SMAD3-210ENST00000559092 DYNLL1P63167 89 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms