RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 SZT2Q5T011 3432 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 CCL5P13501 91 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 SLC5A1P13866 664 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 HOXD10P28358 340 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 PRDX5P30044 214 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 UBE2Q1Q7Z7E8 422 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 RAET1EQ8TD07 263 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 LPIN2Q92539 896 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 DPF3Q92784 378 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
RABGGTA-204ENST00000558376 MYPNQ86TC9 1320 aa13.83□□□□□ -0.2
RABGGTA-204ENST00000558376 IGHDP01880 384 aa13.83□□□□□ -0.2
RABGGTA-204ENST00000558376 BCRP11274 1271 aa13.83□□□□□ -0.2
RABGGTA-204ENST00000558376 MS4A1P11836 297 aa13.83□□□□□ -0.2
RABGGTA-204ENST00000558376 SKAP1Q86WV1 359 aa13.83□□□□□ -0.2
RABGGTA-204ENST00000558376 USP40Q9NVE5 1235 aa13.83□□□□□ -0.2
RABGGTA-204ENST00000558376 RANBP2P49792 3224 aaKnown RBP13.83□□□□□ -0.2
RABGGTA-204ENST00000558376 MYH2Q9UKX2 1941 aa13.83□□□□□ -0.2
RABGGTA-204ENST00000558376 PTPRCP08575 1304 aa13.83□□□□□ -0.2
RABGGTA-204ENST00000558376 GJB1P08034 283 aa13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 CYP2C8P10632 490 aa13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 GJA8P48165 433 aa13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 PRKCZQ05513 592 aa13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 RBM27Q9P2N5 1060 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 GABRQQ9UN88 632 aa13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 PHF20L1A8MW92 1017 aa13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 CXCL11O14625 94 aa13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 SLURP2P0DP57 97 aa13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 API5Q9BZZ5 524 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 ATRNL1Q5VV63 1379 aa13.82□□□□□ -0.2
RABGGTA-204ENST00000558376 SH3BP5LQ7L8J4 393 aa13.81□□□□□ -0.2
RABGGTA-204ENST00000558376 RNF208Q9H0X6 261 aa13.81□□□□□ -0.2
RABGGTA-204ENST00000558376 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-204ENST00000558376 PTPRFP10586 1907 aa13.81□□□□□ -0.2
RABGGTA-204ENST00000558376 ZBTB7BO15156 539 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 LDHBP07195 334 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 NKX2-3Q8TAU0 364 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 PARK7Q99497 189 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 UNC93B1Q9H1C4 597 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 PRO3102Q9H379 93 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 PHIPQ8WWQ0 1821 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 DOCK2Q92608 1830 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 PHKA1P46020 1223 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 RGS3P49796 1198 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 FCGRTP55899 365 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 ATP2B3Q16720 1220 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 SIL1Q9H173 461 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 DDX19BQ9UMR2 479 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 ZHX2Q9Y6X8 837 aa13.8□□□□□ -0.2
RABGGTA-204ENST00000558376 PTPRAP18433 802 aa13.79□□□□□ -0.2
RABGGTA-204ENST00000558376 SCYL3Q8IZE3 742 aa13.79□□□□□ -0.2
RABGGTA-204ENST00000558376 C1orf115Q9H7X2 142 aa13.79□□□□□ -0.2
RABGGTA-204ENST00000558376 ZBTB40Q9NUA8 1239 aa13.79□□□□□ -0.2
RABGGTA-204ENST00000558376 CEP126Q9P2H0 1117 aa13.79□□□□□ -0.2
RABGGTA-204ENST00000558376 AFG3L2Q9Y4W6 797 aa13.79□□□□□ -0.2
RABGGTA-204ENST00000558376 SALL1Q9NSC2 1324 aa13.79□□□□□ -0.2
RABGGTA-204ENST00000558376 A0A0G2JLL6 359 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 ADORA1P30542 326 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 UBXN2AP68543 259 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 PRRT2Q7Z6L0 340 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 U2AF1L4Q8WU68 220 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 IDI2Q9BXS1 227 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 ADCY3O60266 1144 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 CIAO1O76071 339 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 FLT3LGP49771 235 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 MAP3K10Q02779 954 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 GADL1Q6ZQY3 521 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 SLAIN1Q8ND83 568 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 HTATIP2Q9BUP3 242 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 GNL3LQ9NVN8 582 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 DENND2AQ9ULE3 1009 aa13.78□□□□□ -0.2
RABGGTA-204ENST00000558376 RFX7Q2KHR2 1363 aa13.77□□□□□ -0.2
RABGGTA-204ENST00000558376 DDTLA6NHG4 134 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 ENTPD3O75355 529 aa13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 FARP2O94887 1054 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 SGPL1O95470 568 aa13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 ELNP15502 786 aa13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 DDX4Q9NQI0 724 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 PICK1Q9NRD5 415 aa13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 PA2G4Q9UQ80 394 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 GAKO14976 1311 aa13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 DOCK1Q14185 1865 aa13.77□□□□□ -0.21
RABGGTA-204ENST00000558376 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
RABGGTA-204ENST00000558376 SEMA3EO15041 775 aa13.76□□□□□ -0.21
RABGGTA-204ENST00000558376 CCDC84Q86UT8 332 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-204ENST00000558376 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
RABGGTA-204ENST00000558376 INHAP05111 366 aa13.76□□□□□ -0.21
RABGGTA-204ENST00000558376 CCDC102BQ68D86 513 aa13.76□□□□□ -0.21
RABGGTA-204ENST00000558376 ZSCAN29Q8IWY8 852 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-204ENST00000558376 SLC45A1Q9Y2W3 748 aa13.76□□□□□ -0.21
RABGGTA-204ENST00000558376 NR2E3Q9Y5X4 410 aa13.76□□□□□ -0.21
RABGGTA-204ENST00000558376 ZBTB22O15209 634 aa13.75□□□□□ -0.21
RABGGTA-204ENST00000558376 UBTFL1P0CB47 393 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-204ENST00000558376 LRRFIP2Q9Y608 721 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-204ENST00000558376 CTNND1O60716 968 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 TFRCP02786 760 aaKnown RBP13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 IL15P40933 162 aaPredicted RBP13.74□□□□□ -0.21
RABGGTA-204ENST00000558376 TIMM10P62072 90 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms