RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CCDC158Q5M9N0 1113 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 PI16Q6UXB8 463 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 TPTE2Q6XPS3 522 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 LPIN2Q92539 896 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 CELF1Q92879 486 aaKnown RBP8.88□□□□□ -0.99
SPG11-204ENST00000557866 ZNF512BQ96KM6 892 aaPredicted RBP8.88□□□□□ -0.99
SPG11-204ENST00000557866 CDC5LQ99459 802 aaKnown RBP8.88□□□□□ -0.99
SPG11-204ENST00000557866 UNC93B1Q9H1C4 597 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 SNX14Q9Y5W7 946 aa8.88□□□□□ -0.99
SPG11-204ENST00000557866 CCDC171Q6TFL3 1326 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 WTIPA6NIX2 430 aaPredicted RBP8.87□□□□□ -0.99
SPG11-204ENST00000557866 J3QL48 77 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 K7ELQ4 463 aaPredicted RBP8.87□□□□□ -0.99
SPG11-204ENST00000557866 MCCP23508 829 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 GTF2E1P29083 439 aaPredicted RBP8.87□□□□□ -0.99
SPG11-204ENST00000557866 DDIT3P35638 169 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 FKBP4Q02790 459 aaKnown RBP eCLIP8.87□□□□□ -0.99
SPG11-204ENST00000557866 NECTIN1Q15223 517 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 ZMYM1Q5SVZ6 1142 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 GORABQ5T7V8 394 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 MYSM1Q5VVJ2 828 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 CCDC102BQ68D86 513 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 CCDC129Q6ZRS4 1044 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 KIAA1211Q6ZU35 1233 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 ANKRD18AQ8IVF6 992 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 FBXO41Q8TF61 875 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 MAP4K1Q92918 833 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 NLRP3Q96P20 1036 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 ANP32EQ9BTT0 268 aa8.87□□□□□ -0.99
SPG11-204ENST00000557866 SLKQ9H2G2 1235 aaPredicted RBP8.87□□□□□ -0.99
SPG11-204ENST00000557866 BSDC1Q9NW68 430 aaPredicted RBP8.87□□□□□ -0.99
SPG11-204ENST00000557866 RBM8AQ9Y5S9 174 aaKnown RBP8.87□□□□□ -0.99
SPG11-204ENST00000557866 DDX60Q8IY21 1712 aaKnown RBP8.87□□□□□ -0.99
SPG11-204ENST00000557866 CFAP99D6REC4 459 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 RNF113AO15541 343 aaKnown RBP8.86□□□□□ -0.99
SPG11-204ENST00000557866 SLC5A1P13866 664 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 ARID4AP29374 1257 aaPredicted RBP8.86□□□□□ -0.99
SPG11-204ENST00000557866 SH3BP2P78314 561 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 DDR1Q08345 913 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 CSPP1Q1MSJ5 1256 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 MCMDC2Q4G0Z9 681 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 PRR5LQ6MZQ0 368 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 PRPF40BQ6NWY9 871 aaKnown RBP8.86□□□□□ -0.99
SPG11-204ENST00000557866 SLC51AQ86UW1 340 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 TICAM2Q86XR7 235 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 EHBP1Q8NDI1 1231 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 ZNF775Q96BV0 537 aaPredicted RBP8.86□□□□□ -0.99
SPG11-204ENST00000557866 PIH1D3Q9NQM4 214 aaKnown RBP8.86□□□□□ -0.99
SPG11-204ENST00000557866 MINPP1Q9UNW1 487 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 TAF1LQ8IZX4 1826 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 CARMIL3Q8ND23 1372 aa8.86□□□□□ -0.99
SPG11-204ENST00000557866 COL24A1Q17RW2 1714 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 POTECB2RU33 542 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 M0R2C6 588 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 SLC27A2O14975 620 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 SERPINB2P05120 415 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 CYP2E1P05181 493 aaPredicted RBP8.85□□□□□ -0.99
SPG11-204ENST00000557866 NEK4P51957 841 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 RPS8P62241 208 aaKnown RBP8.85□□□□□ -0.99
SPG11-204ENST00000557866 COL9A3Q14050 684 aaPredicted RBP8.85□□□□□ -0.99
SPG11-204ENST00000557866 CREB3L3Q68CJ9 461 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 COL23A1Q86Y22 540 aaPredicted RBP8.85□□□□□ -0.99
SPG11-204ENST00000557866 OSBP2Q969R2 916 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 UPF3BQ9BZI7 483 aaKnown RBP8.85□□□□□ -0.99
SPG11-204ENST00000557866 HELLSQ9NRZ9 838 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 HMG20BQ9P0W2 317 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 LIMD1Q9UGP4 676 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 TAF6LQ9Y6J9 622 aa8.85□□□□□ -0.99
SPG11-204ENST00000557866 POLRMTO00411 1230 aaKnown RBP8.84□□□□□ -0.99
SPG11-204ENST00000557866 SIAH2O43255 324 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 UQCRFS1P1P0C7P4 283 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 CTHP32929 405 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 RASGRF1Q13972 1273 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 ADCK5Q3MIX3 580 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 VPS53Q5VIR6 699 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 CNBD1Q8NA66 436 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 BAP1Q92560 729 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 TTC14Q96N46 770 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 TFCP2L1Q9NZI6 479 aa8.84□□□□□ -0.99
SPG11-204ENST00000557866 LAMB2P55268 1798 aa8.84□□□□□ -1
SPG11-204ENST00000557866 MAST3O60307 1309 aa8.83□□□□□ -1
SPG11-204ENST00000557866 C4AP0C0L4 1744 aa8.83□□□□□ -1
SPG11-204ENST00000557866 FOXP2O15409 715 aa8.83□□□□□ -1
SPG11-204ENST00000557866 LILRB3O75022 631 aa8.83□□□□□ -1
SPG11-204ENST00000557866 ALDH1A1P00352 501 aa8.83□□□□□ -1
SPG11-204ENST00000557866 CPA1P15085 419 aa8.83□□□□□ -1
SPG11-204ENST00000557866 KLRK1P26718 216 aa8.83□□□□□ -1
SPG11-204ENST00000557866 UBE4AQ14139 1066 aa8.83□□□□□ -1
SPG11-204ENST00000557866 CRY2Q49AN0 593 aa8.83□□□□□ -1
SPG11-204ENST00000557866 SPATA5Q8NB90 893 aa8.83□□□□□ -1
SPG11-204ENST00000557866 DACH1Q9UI36 760 aa8.83□□□□□ -1
SPG11-204ENST00000557866 ZNF804BA4D1E1 1349 aa8.82□□□□□ -1
SPG11-204ENST00000557866 IRS2Q9Y4H2 1338 aa8.82□□□□□ -1
SPG11-204ENST00000557866 MYH3P11055 1940 aa8.82□□□□□ -1
SPG11-204ENST00000557866 A0A0G2JLW4 131 aa8.82□□□□□ -1
SPG11-204ENST00000557866 TCRBV5S4A2TA0A5A2 114 aa8.82□□□□□ -1
SPG11-204ENST00000557866 KLRG2A4D1S0 409 aaPredicted RBP8.82□□□□□ -1
SPG11-204ENST00000557866 ZFYP08048 801 aaPredicted RBP8.82□□□□□ -1
SPG11-204ENST00000557866 HMGB2P26583 209 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms