RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	AFG3L2	Q9Y4W6	797 aa		12	□□□□□ -0.49
PABPN1-208	ENST00000557702	PTPRA	P18433	802 aa		11.99	□□□□□ -0.49
PABPN1-208	ENST00000557702	GCKR	Q14397	625 aa		11.99	□□□□□ -0.49
PABPN1-208	ENST00000557702	C9orf50	Q5SZB4	431 aa		11.99	□□□□□ -0.49
PABPN1-208	ENST00000557702	LDHAL6A	Q6ZMR3	332 aa		11.99	□□□□□ -0.49
PABPN1-208	ENST00000557702	IL27	Q8NEV9	243 aa		11.99	□□□□□ -0.49
PABPN1-208	ENST00000557702	AGTPBP1	Q9UPW5	1226 aa		11.99	□□□□□ -0.49
PABPN1-208	ENST00000557702	CHMP3	Q9Y3E7	222 aa		11.99	□□□□□ -0.49
PABPN1-208	ENST00000557702	FRAT2	O75474	233 aa	Predicted RBP	11.98	□□□□□ -0.49
PABPN1-208	ENST00000557702	GCLC	P48506	637 aa	Predicted RBP	11.98	□□□□□ -0.49
PABPN1-208	ENST00000557702	TCP10	Q12799	353 aa		11.98	□□□□□ -0.49
PABPN1-208	ENST00000557702	CHAF1A	Q13111	956 aa	Predicted RBP	11.98	□□□□□ -0.49
PABPN1-208	ENST00000557702	UBE4A	Q14139	1066 aa		11.98	□□□□□ -0.49
PABPN1-208	ENST00000557702	GRIN2C	Q14957	1233 aa		11.98	□□□□□ -0.49
PABPN1-208	ENST00000557702	VPS37D	Q86XT2	251 aa		11.98	□□□□□ -0.49
PABPN1-208	ENST00000557702	SCYL3	Q8IZE3	742 aa		11.98	□□□□□ -0.49
PABPN1-208	ENST00000557702	CNNM1	Q9NRU3	951 aa		11.98	□□□□□ -0.49
PABPN1-208	ENST00000557702	DNAH12	Q6ZR08	3092 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	MAST3	O60307	1309 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	CYP2B6	P20813	491 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	ATN1	P54259	1190 aa	Predicted RBP	11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	CASP7	P55210	303 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	MRPS5	P82675	430 aa	Known RBP	11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	TRIM26	Q12899	539 aa	Predicted RBP	11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	TAF7L	Q5H9L4	462 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	LHX8	Q68G74	356 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	HHIPL2	Q6UWX4	724 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	TRMT44	Q8IYL2	757 aa	Known RBP	11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	SNX27	Q96L92	541 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	MYH16	Q9H6N6	1097 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	THEG	Q9P2T0	379 aa		11.97	□□□□□ -0.49
PABPN1-208	ENST00000557702	AK9	Q5TCS8	1911 aa		11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	TRIM75P	A6NK02	468 aa		11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	XRCC5	P13010	732 aa	Known RBP	11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	CACNB2	Q08289	660 aa	Predicted RBP	11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	CCDC57	Q2TAC2	916 aa		11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	CCDC146	Q8IYE0	955 aa		11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	PPM1E	Q8WY54	764 aa		11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	NUDT12	Q9BQG2	462 aa		11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	SUGT1	Q9Y2Z0	365 aa		11.96	□□□□□ -0.49
PABPN1-208	ENST00000557702	PHF20L1	A8MW92	1017 aa		11.95	□□□□□ -0.5
PABPN1-208	ENST00000557702	CCND3	P30281	292 aa	Predicted RBP	11.95	□□□□□ -0.5
PABPN1-208	ENST00000557702	TREML2	Q5T2D2	321 aa		11.95	□□□□□ -0.5
PABPN1-208	ENST00000557702	SOCS4	Q8WXH5	440 aa		11.95	□□□□□ -0.5
PABPN1-208	ENST00000557702	MYO9B	Q13459	2157 aa		11.95	□□□□□ -0.5
PABPN1-208	ENST00000557702	ZNF853	P0CG23	659 aa		11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	ZKSCAN1	P17029	563 aa	Predicted RBP	11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	RTP1	P59025	263 aa		11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	FOXO4	P98177	505 aa		11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.94	□□□□□ -0.5	3e-6	■■□□□ 13.4
PABPN1-208	ENST00000557702	PDE3A	Q14432	1141 aa		11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	CAVIN4	Q5BKX8	364 aa		11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	FBXO33	Q7Z6M2	555 aa		11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	C8orf58	Q8NAV2	365 aa		11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	BAD	Q92934	168 aa		11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	ZNF594	Q96JF6	807 aa	Predicted RBP	11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	LRRFIP2	Q9Y608	721 aa	Known RBP	11.94	□□□□□ -0.5
PABPN1-208	ENST00000557702	NFIA	Q12857	509 aa		11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	CDC42EP5	Q6NZY7	148 aa		11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	ALYREF	Q86V81	257 aa	Known RBP	11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	RUNDC1	Q96C34	613 aa		11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	RNPC3	Q96LT9	517 aa	Known RBP	11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	GAS2L1	Q99501	681 aa	Predicted RBP	11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	STK31	Q9BXU1	1019 aa		11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	ZNF576	Q9H609	170 aa		11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	IFT57	Q9NWB7	429 aa		11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	ATP11B	Q9Y2G3	1177 aa		11.93	□□□□□ -0.5
PABPN1-208	ENST00000557702	CTNND1	O60716	968 aa	Known RBP	11.92	□□□□□ -0.5
PABPN1-208	ENST00000557702	DNAJB2	P25686	324 aa		11.92	□□□□□ -0.5
PABPN1-208	ENST00000557702	GNAI1	P63096	354 aa		11.92	□□□□□ -0.5
PABPN1-208	ENST00000557702	AKNAD1	Q5T1N1	836 aa		11.92	□□□□□ -0.5
PABPN1-208	ENST00000557702	POTEE	Q6S8J3	1075 aa		11.92	□□□□□ -0.5
PABPN1-208	ENST00000557702	LMBR1L	Q6UX01	489 aa		11.92	□□□□□ -0.5
PABPN1-208	ENST00000557702	LRFN3	Q9BTN0	628 aa		11.92	□□□□□ -0.5
PABPN1-208	ENST00000557702	FAM198A	Q9UFP1	575 aa		11.92	□□□□□ -0.5
PABPN1-208	ENST00000557702	BDP1	A6H8Y1	2624 aa		11.91	□□□□□ -0.5
PABPN1-208	ENST00000557702	MUC6	Q6W4X9	2439 aa		11.91	□□□□□ -0.5
PABPN1-208	ENST00000557702	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.91	□□□□□ -0.5
PABPN1-208	ENST00000557702	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.91	□□□□□ -0.5
PABPN1-208	ENST00000557702	DNM1L	O00429	736 aa		11.91	□□□□□ -0.5
PABPN1-208	ENST00000557702	LINS1	Q8NG48	757 aa		11.91	□□□□□ -0.5
PABPN1-208	ENST00000557702	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.91	□□□□□ -0.5
PABPN1-208	ENST00000557702	MORF4L1	Q9UBU8	362 aa		11.91	□□□□□ -0.5
PABPN1-208	ENST00000557702		A0A1B0GUL6	1792 aa		11.91	□□□□□ -0.5
PABPN1-208	ENST00000557702	MSC	O60682	206 aa		11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	RGS2	P41220	211 aa		11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	CALD1	Q05682	793 aa	Known RBP	11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	CCL14	Q16627	93 aa		11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	ZFPM1	Q8IX07	1006 aa		11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	CCAR1	Q8IX12	1150 aa	Known RBP	11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	LPAR1	Q92633	364 aa		11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	TIFA	Q96CG3	184 aa		11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	USP40	Q9NVE5	1235 aa		11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	ATRNL1	Q5VV63	1379 aa		11.9	□□□□□ -0.5
PABPN1-208	ENST00000557702	MAPK4	P31152	587 aa		11.89	□□□□□ -0.51
PABPN1-208	ENST00000557702	MAP3K10	Q02779	954 aa		11.89	□□□□□ -0.51

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