RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 WNT10AQ9GZT5 417 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 CCDC113Q9H0I3 377 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 RNF208Q9H0X6 261 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 KCNK4Q9NYG8 393 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 ADAMTS8Q9UP79 889 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 TTBK1Q5TCY1 1321 aaPredicted RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 SLFN14P0C7P3 912 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 MAOBP27338 520 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 GSTM4Q03013 218 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 TRIM28Q13263 835 aaKnown RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 PRRT3Q5FWE3 981 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 GDF6Q6KF10 455 aaPredicted RBP2.74□□□□□ -1.97
HIF1A-212ENST00000557538 JMYQ8N9B5 988 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 RNF214Q8ND24 703 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 GRIN3AQ8TCU5 1115 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 GPBAR1Q8TDU6 330 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 TM9SF2Q99805 663 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 PLVAPQ9BX97 442 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 LACRTQ9GZZ8 138 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 GINM1Q9NU53 330 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 PRR13Q9NZ81 148 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 PRKAG3Q9UGI9 489 aa2.74□□□□□ -1.97
HIF1A-212ENST00000557538 TMPRSS2O15393 492 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 CANXP27824 592 aaKnown RBP2.73□□□□□ -1.97
HIF1A-212ENST00000557538 NTF4P34130 210 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 SNRPNP63162 240 aaKnown RBP2.73□□□□□ -1.97
HIF1A-212ENST00000557538 ID3Q02535 119 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 SLC6A19Q695T7 634 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 LRFN4Q6PJG9 635 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 SEZ6L2Q6UXD5 910 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 BNC2Q6ZN30 1099 aaPredicted RBP2.73□□□□□ -1.97
HIF1A-212ENST00000557538 GOLM1Q8NBJ4 401 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 ZNF507Q8TCN5 953 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 NUDT8Q8WV74 236 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 COX4I2Q96KJ9 171 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 ATXN3LQ9H3M9 355 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 IGFLR1Q9H665 355 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 CNNM2Q9H8M5 875 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 SIRPGQ9P1W8 387 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 PRKAG2Q9UGJ0 569 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 TLR6Q9Y2C9 796 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 ZBTB37Q5TC79 503 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 TMX1Q9H3N1 280 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 GMIPQ9P107 970 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 SLC12A7Q9Y666 1083 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 DLGAP3O95886 979 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 ATP2B1P20020 1258 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 CRKP46108 304 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 ZNF143P52747 638 aaPredicted RBP2.73□□□□□ -1.97
HIF1A-212ENST00000557538 PTPN11Q06124 597 aaPredicted RBP2.73□□□□□ -1.97
HIF1A-212ENST00000557538 SOX4Q06945 474 aaPredicted RBP2.73□□□□□ -1.97
HIF1A-212ENST00000557538 C9orf131Q5VYM1 1079 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.73□□□□□ -1.97
HIF1A-212ENST00000557538 MCATQ8IVS2 390 aaKnown RBP2.73□□□□□ -1.97
HIF1A-212ENST00000557538 C2CD4AQ8NCU7 369 aaPredicted RBP2.73□□□□□ -1.97
HIF1A-212ENST00000557538 CEP41Q9BYV8 373 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 CYP4F12Q9HCS2 524 aa2.73□□□□□ -1.97
HIF1A-212ENST00000557538 COL17A1Q9UMD9 1497 aaPredicted RBP2.72□□□□□ -1.97
HIF1A-212ENST00000557538 RNF225M0QZC1 329 aaPredicted RBP2.72□□□□□ -1.97
HIF1A-212ENST00000557538 CAPNS1P04632 268 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 GSK3AP49840 483 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 SLFN12Q8IYM2 578 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 VWCEQ96DN2 955 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 FAM181BA6NEQ2 426 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 ADH5P11766 374 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 PODNQ7Z5L7 613 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 SVOPQ8N4V2 548 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 TMEM40Q8WWA1 233 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 PCOLCE2Q9UKZ9 415 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 PCDHGB7Q9Y5F8 929 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 IGSF3O75054 1194 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 CST3P01034 146 aaPredicted RBP2.72□□□□□ -1.97
HIF1A-212ENST00000557538 COL8A1P27658 744 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 TNNI2P48788 182 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 CLCQ05315 142 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 TBC1D8BQ0IIM8 1120 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 APOBRQ0VD83 1088 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 CPSF6Q16630 551 aaKnown RBP eCLIP2.72□□□□□ -1.97
HIF1A-212ENST00000557538 NEDD1Q8NHV4 660 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 PSMG3-AS1Q96PY0 264 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 RUSC1Q9BVN2 902 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 SRRTQ9BXP5 876 aaKnown RBP2.72□□□□□ -1.97
HIF1A-212ENST00000557538 ACSS3Q9H6R3 686 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 DISC1Q9NRI5 854 aa2.72□□□□□ -1.97
HIF1A-212ENST00000557538 CNTNAP5Q8WYK1 1306 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 SLC22A31A6NKX4 558 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 PDE4BQ07343 736 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 DUOXA2Q1HG44 320 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 ANKRD39Q53RE8 183 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 TRAPPC3LQ5T215 181 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 UBASH3BQ8TF42 649 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 SMARCC1Q92922 1105 aaPredicted RBP2.71□□□□□ -1.98
HIF1A-212ENST00000557538 EPN3Q9H201 632 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 AKTIPQ9H8T0 292 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 BRMS1Q9HCU9 246 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 PPP1R9AQ9ULJ8 1098 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 FBXO24O75426 580 aa2.71□□□□□ -1.98
HIF1A-212ENST00000557538 NASPP49321 788 aaPredicted RBP2.71□□□□□ -1.98
HIF1A-212ENST00000557538 RAB33AQ14088 237 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms