RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 TCP10Q12799 353 aa12.66□□□□□ -0.38
APEX1-218ENST00000557344 FASTKD5Q7L8L6 764 aaKnown RBP12.66□□□□□ -0.38
APEX1-218ENST00000557344 DIS3LQ8TF46 1054 aaKnown RBP12.66□□□□□ -0.38
APEX1-218ENST00000557344 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
APEX1-218ENST00000557344 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
APEX1-218ENST00000557344 ALPK3Q96L96 1907 aa12.65□□□□□ -0.38
APEX1-218ENST00000557344 A0A0G2JLL6 359 aaPredicted RBP12.65□□□□□ -0.38
APEX1-218ENST00000557344 TNPO2O14787 897 aaKnown RBP12.65□□□□□ -0.38
APEX1-218ENST00000557344 PRRT2Q7Z6L0 340 aaPredicted RBP12.65□□□□□ -0.38
APEX1-218ENST00000557344 C7orf61Q8IZ16 206 aa12.65□□□□□ -0.38
APEX1-218ENST00000557344 ANKLE1Q8NAG6 615 aa12.65□□□□□ -0.38
APEX1-218ENST00000557344 ZMYND8Q9ULU4 1186 aaPredicted RBP12.65□□□□□ -0.38
APEX1-218ENST00000557344 SLC45A1Q9Y2W3 748 aa12.65□□□□□ -0.38
APEX1-218ENST00000557344 PHF20L1A8MW92 1017 aa12.64□□□□□ -0.39
APEX1-218ENST00000557344 NFIAQ12857 509 aa12.64□□□□□ -0.39
APEX1-218ENST00000557344 RABL6Q3YEC7 729 aaPredicted RBP12.64□□□□□ -0.39
APEX1-218ENST00000557344 LRRC24Q50LG9 513 aa12.64□□□□□ -0.39
APEX1-218ENST00000557344 CDC42EP5Q6NZY7 148 aa12.64□□□□□ -0.39
APEX1-218ENST00000557344 VGLL2Q8N8G2 317 aa12.64□□□□□ -0.39
APEX1-218ENST00000557344 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.39
APEX1-218ENST00000557344 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
APEX1-218ENST00000557344 SMC4Q9NTJ3 1288 aa12.64□□□□□ -0.39
APEX1-218ENST00000557344 ZHX2Q9Y6X8 837 aa12.64□□□□□ -0.39
APEX1-218ENST00000557344 PDE8BO95263 885 aa12.63□□□□□ -0.39
APEX1-218ENST00000557344 PTPRAP18433 802 aa12.63□□□□□ -0.39
APEX1-218ENST00000557344 MAGEA10P43363 369 aaPredicted RBP12.63□□□□□ -0.39
APEX1-218ENST00000557344 METTL24Q5JXM2 366 aa12.63□□□□□ -0.39
APEX1-218ENST00000557344 TDHQ8IZJ6 230 aa12.63□□□□□ -0.39
APEX1-218ENST00000557344 ANKRD44Q8N8A2 993 aa12.63□□□□□ -0.39
APEX1-218ENST00000557344 COA7Q96BR5 231 aa12.63□□□□□ -0.39
APEX1-218ENST00000557344 BICC1Q9H694 974 aaKnown RBP12.63□□□□□ -0.39
APEX1-218ENST00000557344 FAM198AQ9UFP1 575 aa12.63□□□□□ -0.39
APEX1-218ENST00000557344 DAGLAQ9Y4D2 1042 aa12.63□□□□□ -0.39
APEX1-218ENST00000557344 AFG3L2Q9Y4W6 797 aa12.63□□□□□ -0.39
APEX1-218ENST00000557344 ATRNL1Q5VV63 1379 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 SYN1P17600 705 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
APEX1-218ENST00000557344 GADL1Q6ZQY3 521 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 ZFPM1Q8IX07 1006 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 SCYL3Q8IZE3 742 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 WDR66Q8TBY9 1149 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 SMCR8Q8TEV9 937 aaPredicted RBP12.62□□□□□ -0.39
APEX1-218ENST00000557344 NBPF3Q9H094 633 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 PICK1Q9NRD5 415 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 TAOK2Q9UL54 1235 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
APEX1-218ENST00000557344 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
APEX1-218ENST00000557344 FGFR2P21802 821 aa12.61□□□□□ -0.39
APEX1-218ENST00000557344 DIXDC1Q155Q3 683 aa12.61□□□□□ -0.39
APEX1-218ENST00000557344 RPTORQ8N122 1335 aa12.61□□□□□ -0.39
APEX1-218ENST00000557344 DOCK3Q8IZD9 2030 aa12.61□□□□□ -0.39
APEX1-218ENST00000557344 HMGCRP04035 888 aa12.6□□□□□ -0.39
APEX1-218ENST00000557344 MAP3K10Q02779 954 aa12.6□□□□□ -0.39
APEX1-218ENST00000557344 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.6□□□□□ -0.39
APEX1-218ENST00000557344 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
APEX1-218ENST00000557344 UBE2OQ9C0C9 1292 aaKnown RBP12.6□□□□□ -0.39
APEX1-218ENST00000557344 C11orf49Q9H6J7 331 aa12.6□□□□□ -0.39
APEX1-218ENST00000557344 USP40Q9NVE5 1235 aa12.6□□□□□ -0.39
APEX1-218ENST00000557344 AK9Q5TCS8 1911 aa12.6□□□□□ -0.39
APEX1-218ENST00000557344 IFIT1P09914 478 aaKnown RBP12.59□□□□□ -0.39
APEX1-218ENST00000557344 PRDX5P30044 214 aa12.59□□□□□ -0.39
APEX1-218ENST00000557344 PUM3Q15397 648 aaKnown RBP12.59□□□□□ -0.39
APEX1-218ENST00000557344 FAM110CQ1W6H9 321 aa12.59□□□□□ -0.39
APEX1-218ENST00000557344 HMX1Q9NP08 348 aaPredicted RBP12.59□□□□□ -0.39
APEX1-218ENST00000557344 GJD2Q9UKL4 321 aa12.59□□□□□ -0.39
APEX1-218ENST00000557344 OGDHLQ9ULD0 1010 aa12.59□□□□□ -0.39
APEX1-218ENST00000557344 AGTPBP1Q9UPW5 1226 aa12.59□□□□□ -0.39
APEX1-218ENST00000557344 UNC80Q8N2C7 3258 aa12.59□□□□□ -0.39
APEX1-218ENST00000557344 TRIM75PA6NK02 468 aa12.58□□□□□ -0.4
APEX1-218ENST00000557344 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
APEX1-218ENST00000557344 CTNND1O60716 968 aaKnown RBP12.58□□□□□ -0.4
APEX1-218ENST00000557344 ENTPD3O75355 529 aa12.58□□□□□ -0.4
APEX1-218ENST00000557344 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
APEX1-218ENST00000557344 TRIM32Q13049 653 aa12.58□□□□□ -0.4
APEX1-218ENST00000557344 FAM109BQ6ICB4 259 aaPredicted RBP12.58□□□□□ -0.4
APEX1-218ENST00000557344 SH3BP5LQ7L8J4 393 aa12.58□□□□□ -0.4
APEX1-218ENST00000557344 KLHDC4Q8TBB5 520 aa12.58□□□□□ -0.4
APEX1-218ENST00000557344 ARHGAP45Q92619 1136 aa12.58□□□□□ -0.4
APEX1-218ENST00000557344 IDI2Q9BXS1 227 aa12.58□□□□□ -0.4
APEX1-218ENST00000557344 API5Q9BZZ5 524 aaKnown RBP12.58□□□□□ -0.4
APEX1-218ENST00000557344 LDHBP07195 334 aaKnown RBP12.57□□□□□ -0.4
APEX1-218ENST00000557344 RFX5P48382 616 aaPredicted RBP12.57□□□□□ -0.4
APEX1-218ENST00000557344 RGS3P49796 1198 aa12.57□□□□□ -0.4
APEX1-218ENST00000557344 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
APEX1-218ENST00000557344 LPIN2Q92539 896 aa12.57□□□□□ -0.4
APEX1-218ENST00000557344 PNMA3Q9UL41 463 aa12.57□□□□□ -0.4
APEX1-218ENST00000557344 LRRFIP2Q9Y608 721 aaKnown RBP12.57□□□□□ -0.4
APEX1-218ENST00000557344 PFASO15067 1338 aa12.57□□□□□ -0.4
APEX1-218ENST00000557344 PTPRFP10586 1907 aa12.56□□□□□ -0.4
APEX1-218ENST00000557344 BCAR3O75815 825 aa12.56□□□□□ -0.4
APEX1-218ENST00000557344 SLURP2P0DP57 97 aa12.56□□□□□ -0.4
APEX1-218ENST00000557344 SLC5A1P13866 664 aa12.56□□□□□ -0.4
APEX1-218ENST00000557344 GCLCP48506 637 aaPredicted RBP12.56□□□□□ -0.4
APEX1-218ENST00000557344 MAP3K21Q5TCX8 1036 aa12.56□□□□□ -0.4
APEX1-218ENST00000557344 CCDC84Q86UT8 332 aaPredicted RBP12.56□□□□□ -0.4
APEX1-218ENST00000557344 GUCD1Q96NT3 240 aa12.56□□□□□ -0.4
APEX1-218ENST00000557344 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.56□□□□□ -0.4
APEX1-218ENST00000557344 DDX60LQ5H9U9 1706 aaKnown RBP12.55□□□□□ -0.4
APEX1-218ENST00000557344 DDTLA6NHG4 134 aaPredicted RBP12.55□□□□□ -0.4
APEX1-218ENST00000557344 COL6A1P12109 1028 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms