RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	SMIM22	K7EJ46	135 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SH2B2	O14492	632 aa	Predicted RBP	11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	TRAK2	O60296	914 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	JAK2	O60674	1132 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	LDHB	P07195	334 aa	Known RBP	11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	ZSCAN22	P10073	491 aa	Predicted RBP	11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	KCNA3	P22001	575 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	TDO2	P48775	406 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	PPARA	Q07869	468 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	RALYL	Q86SE5	291 aa	Known RBP	11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	MPND	Q8N594	471 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	NSUN7	Q8NE18	718 aa	Known RBP	11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	C7orf43	Q8WVR3	580 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	CHAMP1	Q96JM3	812 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	COA1	Q9GZY4	146 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	PIM2	Q9P1W9	311 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	MKRN1	Q9UHC7	482 aa	Known RBP	11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	HPS5	Q9UPZ3	1129 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SNED1	Q8TER0	1413 aa		11.17	□□□□□ -0.62
HNRNPC-223	ENST00000556142	ARFGEF1	Q9Y6D6	1849 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	BRCA1	P38398	1863 aa	Known RBP	11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	C6orf229	H3BNL8	230 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	PDIA4	P13667	645 aa	Known RBP	11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	PTMS	P20962	102 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	TRDN	Q13061	729 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	CTR9	Q6PD62	1173 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	FAM163A	Q96GL9	167 aa	Predicted RBP	11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	TMEM87B	Q96K49	555 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	ZSWIM5	Q9P217	1185 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142		H0YIN7	160 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	F13A1	P00488	732 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	FGD1	P98174	961 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SBK1	Q52WX2	424 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	DALRD3	Q5D0E6	543 aa	Known RBP	11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	MCTP1	Q6DN14	999 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	1e-21	■□□□□ 9
HNRNPC-223	ENST00000556142	MTA3	Q9BTC8	594 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	KRT23	Q9C075	422 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	CNNM2	Q9H8M5	875 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SENP2	Q9HC62	589 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	ATP8A2	Q9NTI2	1148 aa		11.16	□□□□□ -0.62
HNRNPC-223	ENST00000556142	MYH13	Q9UKX3	1938 aa		11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	RIMBP2	O15034	1052 aa		11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	CHRNA5	P30532	468 aa		11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	LIFR	P42702	1097 aa		11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	CCT2	P78371	535 aa	Known RBP	11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	GSTO1	P78417	241 aa		11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	LARP1B	Q659C4	914 aa	Known RBP	11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	DPP8	Q6V1X1	898 aa	Predicted RBP	11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	MFSD6	Q6ZSS7	791 aa		11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	SGMS1	Q86VZ5	419 aa		11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	DZIP1	Q86YF9	867 aa	Known RBP	11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	LY9	Q9HBG7	655 aa		11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	ANGEL1	Q9UNK9	670 aa	Known RBP	11.15	□□□□□ -0.62
HNRNPC-223	ENST00000556142	MROH7-TTC4	A0A0A0MT08	1334 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	GAK	O14976	1311 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	CYP2D7	A0A087X1C5	515 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	GPR75-ASB3	A0A0A6YYF3	556 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	KLF18	A0A0U1RQI7	1052 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	USP17L12	C9JPN9	530 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	USP17L21	D6R901	530 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	KDM4A	O75164	1064 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	SLC34A2	O95436	690 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	LDHC	P07864	332 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	FDPS	P14324	419 aa	Known RBP	11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	EVX2	Q03828	476 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	DIXDC1	Q155Q3	683 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	TBC1D22A	Q8WUA7	517 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	CNKSR1	Q969H4	720 aa		11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	RNF41	Q9H4P4	317 aa	Predicted RBP	11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	NCOA5	Q9HCD5	579 aa	Known RBP	11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
HNRNPC-223	ENST00000556142	MINDY4B	A8MYZ0	360 aa		11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	PC	P11498	1178 aa	Known RBP	11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	VEGFA	P15692	232 aa	Predicted RBP	11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	PDC	P20941	246 aa		11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	GTF2I	P78347	998 aa		11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	CERS5	Q8N5B7	392 aa		11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	SUGT1	Q9Y2Z0	365 aa		11.13	□□□□□ -0.63
HNRNPC-223	ENST00000556142	NID2	Q14112	1375 aa		11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	PTPDC1	A2A3K4	754 aa		11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	GOLGA6L22	H0YM25	854 aa		11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	RHBDL3	P58872	404 aa		11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	HMGN5	P82970	282 aa	Known RBP	11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	GSE1	Q14687	1217 aa		11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	SEC23A	Q15436	765 aa		11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	MFSD14B	Q5SR56	506 aa		11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	CDC37L1	Q7L3B6	337 aa		11.12	□□□□□ -0.63
HNRNPC-223	ENST00000556142	TMEM87A	Q8NBN3	555 aa		11.12	□□□□□ -0.63

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