RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.26■■□□□ 1.31
CDKN3-209ENST00000556102 PHF20L1A8MW92 1017 aa23.25■■□□□ 1.31
CDKN3-209ENST00000556102 CXCL11O14625 94 aa23.25■■□□□ 1.31
CDKN3-209ENST00000556102 EN2P19622 333 aaPredicted RBP23.25■■□□□ 1.31
CDKN3-209ENST00000556102 PRMT2P55345 433 aa23.25■■□□□ 1.31
CDKN3-209ENST00000556102 SH3BP5LQ7L8J4 393 aa23.25■■□□□ 1.31
CDKN3-209ENST00000556102 SCYL3Q8IZE3 742 aa23.25■■□□□ 1.31
CDKN3-209ENST00000556102 CPA4Q9UI42 421 aa23.25■■□□□ 1.31
CDKN3-209ENST00000556102 ADGRA2Q96PE1 1338 aa23.25■■□□□ 1.31
CDKN3-209ENST00000556102 DOCK1Q14185 1865 aa23.24■■□□□ 1.31
CDKN3-209ENST00000556102 PNMA6EA0A0J9YXQ4 647 aa23.24■■□□□ 1.31
CDKN3-209ENST00000556102 MAP3K10Q02779 954 aa23.24■■□□□ 1.31
CDKN3-209ENST00000556102 MECOMQ03112 1051 aa23.24■■□□□ 1.31
CDKN3-209ENST00000556102 CLUAP1Q96AJ1 413 aa23.24■■□□□ 1.31
CDKN3-209ENST00000556102 DDX4Q9NQI0 724 aaKnown RBP23.24■■□□□ 1.31
CDKN3-209ENST00000556102 PICK1Q9NRD5 415 aa23.24■■□□□ 1.31
CDKN3-209ENST00000556102 HMG20BQ9P0W2 317 aa23.24■■□□□ 1.31
CDKN3-209ENST00000556102 PTPRFP10586 1907 aa23.23■■□□□ 1.31
CDKN3-209ENST00000556102 GPR75-ASB3A0A0A6YYF3 556 aa23.23■■□□□ 1.31
CDKN3-209ENST00000556102 DDTLA6NHG4 134 aaPredicted RBP23.23■■□□□ 1.31
CDKN3-209ENST00000556102 G3BP1Q13283 466 aaKnown RBP eCLIP23.23■■□□□ 1.31
CDKN3-209ENST00000556102 PICALMQ13492 652 aa23.23■■□□□ 1.31
CDKN3-209ENST00000556102 GORABQ5T7V8 394 aa23.23■■□□□ 1.31
CDKN3-209ENST00000556102 SPATA5Q8NB90 893 aa23.23■■□□□ 1.31
CDKN3-209ENST00000556102 ARID4AP29374 1257 aaPredicted RBP23.22■■□□□ 1.31
CDKN3-209ENST00000556102 RHBDL3P58872 404 aa23.22■■□□□ 1.31
CDKN3-209ENST00000556102 GPAT2Q6NUI2 795 aa23.22■■□□□ 1.31
CDKN3-209ENST00000556102 ZNF384Q8TF68 577 aa23.22■■□□□ 1.31
CDKN3-209ENST00000556102 PARK7Q99497 189 aaKnown RBP23.22■■□□□ 1.31
CDKN3-209ENST00000556102 ZHX2Q9Y6X8 837 aa23.22■■□□□ 1.31
CDKN3-209ENST00000556102 PHIPQ8WWQ0 1821 aa23.22■■□□□ 1.31
CDKN3-209ENST00000556102 NPM3O75607 178 aaKnown RBP23.21■■□□□ 1.31
CDKN3-209ENST00000556102 LDHCP07864 332 aa23.21■■□□□ 1.31
CDKN3-209ENST00000556102 PTPRAP18433 802 aa23.21■■□□□ 1.31
CDKN3-209ENST00000556102 CTGFP29279 349 aa23.21■■□□□ 1.31
CDKN3-209ENST00000556102 PSMC4P43686 418 aa23.21■■□□□ 1.31
CDKN3-209ENST00000556102 GSTO1P78417 241 aa23.21■■□□□ 1.31
CDKN3-209ENST00000556102 PI16Q6UXB8 463 aa23.21■■□□□ 1.31
CDKN3-209ENST00000556102 SH3TC2Q8TF17 1288 aa23.21■■□□□ 1.31
CDKN3-209ENST00000556102 A0A0G2JLL6 359 aaPredicted RBP23.2■■□□□ 1.3
CDKN3-209ENST00000556102 CTNND1O60716 968 aaKnown RBP23.2■■□□□ 1.3
CDKN3-209ENST00000556102 MAP4K4O95819 1239 aaPredicted RBP23.2■■□□□ 1.3
CDKN3-209ENST00000556102 SLC4A8Q2Y0W8 1093 aa23.2■■□□□ 1.3
CDKN3-209ENST00000556102 ZKSCAN2Q63HK3 967 aa23.2■■□□□ 1.3
CDKN3-209ENST00000556102 FASTKD5Q7L8L6 764 aaKnown RBP23.2■■□□□ 1.3
CDKN3-209ENST00000556102 PRRT2Q7Z6L0 340 aaPredicted RBP23.2■■□□□ 1.3
CDKN3-209ENST00000556102 TMEM57Q8N5G2 664 aa23.2■■□□□ 1.3
CDKN3-209ENST00000556102 NSUN4Q96CB9 384 aaKnown RBP23.2■■□□□ 1.3
CDKN3-209ENST00000556102 TRIM47Q96LD4 638 aa23.2■■□□□ 1.3
CDKN3-209ENST00000556102 SRRDQ9UH36 339 aa23.2■■□□□ 1.3
CDKN3-209ENST00000556102 MGAMO43451 1857 aa23.19■■□□□ 1.3
CDKN3-209ENST00000556102 ECM2O94769 699 aaPredicted RBP23.19■■□□□ 1.3
CDKN3-209ENST00000556102 UQCRFS1P1P0C7P4 283 aa23.19■■□□□ 1.3
CDKN3-209ENST00000556102 HOXD10P28358 340 aa23.19■■□□□ 1.3
CDKN3-209ENST00000556102 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
CDKN3-209ENST00000556102 AFG3L2Q9Y4W6 797 aa23.19■■□□□ 1.3
CDKN3-209ENST00000556102 TBC1D12O60347 775 aa23.18■■□□□ 1.3
CDKN3-209ENST00000556102 FMNL1O95466 1100 aaPredicted RBP23.18■■□□□ 1.3
CDKN3-209ENST00000556102 SLURP2P0DP57 97 aa23.18■■□□□ 1.3
CDKN3-209ENST00000556102 BCRP11274 1271 aa23.18■■□□□ 1.3
CDKN3-209ENST00000556102 OSBPP22059 807 aa23.18■■□□□ 1.3
CDKN3-209ENST00000556102 MCAMP43121 646 aa23.18■■□□□ 1.3
CDKN3-209ENST00000556102 GCC1Q96CN9 775 aa23.18■■□□□ 1.3
CDKN3-209ENST00000556102 RAI14Q9P0K7 980 aa23.18■■□□□ 1.3
CDKN3-209ENST00000556102 COL2A1P02458 1487 aaPredicted RBP23.17■■□□□ 1.3
CDKN3-209ENST00000556102 MYCP01106 439 aaPredicted RBP23.17■■□□□ 1.3
CDKN3-209ENST00000556102 CYP2C8P10632 490 aa23.17■■□□□ 1.3
CDKN3-209ENST00000556102 POLA2Q14181 598 aa23.17■■□□□ 1.3
CDKN3-209ENST00000556102 GADL1Q6ZQY3 521 aa23.17■■□□□ 1.3
CDKN3-209ENST00000556102 GPR108Q9NPR9 543 aa23.17■■□□□ 1.3
CDKN3-209ENST00000556102 SLC45A1Q9Y2W3 748 aa23.17■■□□□ 1.3
CDKN3-209ENST00000556102 MAST2Q6P0Q8 1798 aa23.16■■□□□ 1.3
CDKN3-209ENST00000556102 MYPNQ86TC9 1320 aa23.15■■□□□ 1.3
CDKN3-209ENST00000556102 RAET1EQ8TD07 263 aa23.15■■□□□ 1.3
CDKN3-209ENST00000556102 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
CDKN3-209ENST00000556102 LRP2BPQ9P2M1 347 aa23.15■■□□□ 1.3
CDKN3-209ENST00000556102 ATAD5Q96QE3 1844 aa23.15■■□□□ 1.3
CDKN3-209ENST00000556102 FCGRTP55899 365 aa23.14■■□□□ 1.29
CDKN3-209ENST00000556102 TNNI3KQ59H18 835 aa23.14■■□□□ 1.29
CDKN3-209ENST00000556102 SSH3Q8TE77 659 aa23.14■■□□□ 1.29
CDKN3-209ENST00000556102 OSBPL5Q9H0X9 879 aaPredicted RBP23.14■■□□□ 1.29
CDKN3-209ENST00000556102 FPGT-TNNI3KV9GXZ4 949 aa23.14■■□□□ 1.29
CDKN3-209ENST00000556102 TRIM75PA6NK02 468 aa23.13■■□□□ 1.29
CDKN3-209ENST00000556102 FAM196BA6NMK8 535 aa23.13■■□□□ 1.29
CDKN3-209ENST00000556102 GRK4P32298 578 aa23.13■■□□□ 1.29
CDKN3-209ENST00000556102 ATP8B2P98198 1209 aa23.13■■□□□ 1.29
CDKN3-209ENST00000556102 OS9Q13438 667 aaPredicted RBP23.13■■□□□ 1.29
CDKN3-209ENST00000556102 TTC39AQ5SRH9 613 aa23.13■■□□□ 1.29
CDKN3-209ENST00000556102 TEX11Q8IYF3 940 aa23.13■■□□□ 1.29
CDKN3-209ENST00000556102 PCDH10Q9P2E7 1040 aa23.13■■□□□ 1.29
CDKN3-209ENST00000556102 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.13■■□□□ 1.29
CDKN3-209ENST00000556102 HNRNPUQ00839 825 aaKnown RBP eCLIP23.12■■□□□ 1.29
CDKN3-209ENST00000556102 MTFR1Q15390 333 aa23.12■■□□□ 1.29
CDKN3-209ENST00000556102 CCDC158Q5M9N0 1113 aa23.12■■□□□ 1.29
CDKN3-209ENST00000556102 CCDC84Q86UT8 332 aaPredicted RBP23.12■■□□□ 1.29
CDKN3-209ENST00000556102 DBNDD2Q9BQY9 259 aa23.12■■□□□ 1.29
CDKN3-209ENST00000556102 NOL10Q9BSC4 688 aaKnown RBP23.12■■□□□ 1.29
CDKN3-209ENST00000556102 CDK5RAP2Q96SN8 1893 aa23.11■■□□□ 1.29
CDKN3-209ENST00000556102 MYO5AQ9Y4I1 1855 aaKnown RBP23.11■■□□□ 1.29
CDKN3-209ENST00000556102 PRKCZQ05513 592 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms