RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TEKT1Q969V4 418 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 ATP8A2Q9NTI2 1148 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 DAGLAQ9Y4D2 1042 aa11.46□□□□□ -0.57
HNRNPC-220ENST00000555585 ADAMTSL1Q8N6G6 1762 aa11.46□□□□□ -0.58
HNRNPC-220ENST00000555585 NAV1Q8NEY1 1877 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 CDK5RAP2Q96SN8 1893 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 VIL1P09327 827 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 HMGB1P09429 215 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 RPS6KB1P23443 525 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 MCM2P49736 904 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 TRDNQ13061 729 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 CIAPIN1Q6FI81 312 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 HHIPL2Q6UWX4 724 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 RALYLQ86SE5 291 aaKnown RBP11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 TGFBRAP1Q8WUH2 860 aa11.45□□□□□ -0.58
HNRNPC-220ENST00000555585 MNX1P50219 401 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 AK2P54819 239 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 HDLBPQ00341 1268 aaKnown RBP11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 PPARAQ07869 468 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 TNIP1Q15025 636 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 TBC1D10CQ8IV04 446 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 MAPKAPK5Q8IW41 473 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 AMOTL1Q8IY63 956 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 STK11IPQ8N1F8 1099 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 NCOA7Q8NI08 942 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 TTC14Q96N46 770 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 DCP1AQ9NPI6 582 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 TOMM22Q9NS69 142 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 USP40Q9NVE5 1235 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 HDAC9Q9UKV0 1011 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 LAMB1P07942 1786 aa11.44□□□□□ -0.58
HNRNPC-220ENST00000555585 CYP2D7A0A087X1C5 515 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 USP17L12C9JPN9 530 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 USP17L21D6R901 530 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 HSP90AA1P07900 732 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 RHBDL3P58872 404 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 FGD1P98174 961 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 CXCL9Q07325 125 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 CTR9Q6PD62 1173 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 MFSD6Q6ZSS7 791 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 DHX32Q7L7V1 743 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 TCEANC2Q96MN5 208 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 MRIQ9BWK5 157 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 NBPF3Q9H094 633 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 RNF41Q9H4P4 317 aaPredicted RBP11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 MCM9Q9NXL9 1143 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 ARPP21Q9UBL0 812 aaPredicted RBP11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 SAP30BPQ9UHR5 308 aaKnown RBP11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 SERPINA10Q9UK55 444 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 ECM29Q5VYK3 1845 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 TIAM2Q8IVF5 1701 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 MYH1P12882 1939 aa11.43□□□□□ -0.58
HNRNPC-220ENST00000555585 FOCADQ5VW36 1801 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 POLR3DP05423 398 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 SLC3A2P08195 630 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 USP17L8P0C7I0 530 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 CYP2D6P10635 497 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 PRELPP51888 382 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 PICALMQ13492 652 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 COL9A3Q14050 684 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 ANKRD1Q15327 319 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 SLC4A8Q2Y0W8 1093 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 SBK1Q52WX2 424 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 RRP12Q5JTH9 1297 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 AKNAD1Q5T1N1 836 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 Q6ZUG5 572 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 OGFOD1Q8N543 542 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 AGBL3Q8NEM8 1001 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 ZDHHC15Q96MV8 337 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 KRT23Q9C075 422 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 CNNM2Q9H8M5 875 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 ANAPC4Q9UJX5 808 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 GJA3Q9Y6H8 435 aa11.42□□□□□ -0.58
HNRNPC-220ENST00000555585 NEDD4P46934 1319 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 DICER1Q9UPY3 1922 aaKnown RBP11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 B4E1Z4 1266 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 PRC1O43663 620 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 LMNB1P20700 586 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 MCM5P33992 734 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 APOBEC3HQ6NTF7 200 aaKnown RBP11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 CDC42EP5Q6NZY7 148 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 CHST3Q7LGC8 479 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 MB21D2Q8IYB1 491 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 STAG1Q8WVM7 1258 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 TMX3Q96JJ7 454 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 ZSCAN31Q96LW9 406 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 GMLQ99445 158 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 LRRC2Q9BYS8 371 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 ALDH8A1Q9H2A2 487 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 LIMCH1Q9UPQ0 1083 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 PCDHAC2Q9Y5I4 1007 aa11.41□□□□□ -0.58
HNRNPC-220ENST00000555585 FLT1P17948 1338 aa11.4□□□□□ -0.58
HNRNPC-220ENST00000555585 YBX3P16989 372 aaKnown RBP eCLIP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms