RNA–Protein interactions for RNA: ENST00000555394.5

NUMB-216, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-216ENST00000555394 ANAPC4Q9UJX5 808 aa16.86■□□□□ 0.29
NUMB-216ENST00000555394 USP17L12C9JPN9 530 aa16.86■□□□□ 0.29
NUMB-216ENST00000555394 USP17L21D6R901 530 aa16.86■□□□□ 0.29
NUMB-216ENST00000555394 MAP3K11Q16584 847 aa16.86■□□□□ 0.29
NUMB-216ENST00000555394 CTR9Q6PD62 1173 aa16.86■□□□□ 0.29
NUMB-216ENST00000555394 RPGRQ92834 1020 aaKnown RBP16.86■□□□□ 0.29
NUMB-216ENST00000555394 TNMDQ9H2S6 317 aa16.86■□□□□ 0.29
NUMB-216ENST00000555394 CLIC4Q9Y696 253 aa16.86■□□□□ 0.29
NUMB-216ENST00000555394 ESPNB1AK53 854 aa16.85■□□□□ 0.29
NUMB-216ENST00000555394 CDKL5O76039 1030 aa16.85■□□□□ 0.29
NUMB-216ENST00000555394 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
NUMB-216ENST00000555394 CPLX2Q6PUV4 134 aaKnown RBP16.85■□□□□ 0.29
NUMB-216ENST00000555394 CMTR1Q8N1G2 835 aaKnown RBP16.85■□□□□ 0.29
NUMB-216ENST00000555394 BRIP1Q9BX63 1249 aa16.85■□□□□ 0.29
NUMB-216ENST00000555394 PDS5AQ29RF7 1337 aaKnown RBP16.85■□□□□ 0.29
NUMB-216ENST00000555394 KIF23Q02241 960 aaPredicted RBP16.85■□□□□ 0.29
NUMB-216ENST00000555394 DDR1Q08345 913 aa16.85■□□□□ 0.29
NUMB-216ENST00000555394 SART3Q15020 963 aaKnown RBP16.85■□□□□ 0.29
NUMB-216ENST00000555394 ATL3Q6DD88 541 aa16.85■□□□□ 0.29
NUMB-216ENST00000555394 AEBP2Q6ZN18 517 aaPredicted RBP16.85■□□□□ 0.29
NUMB-216ENST00000555394 CCDC82Q8N4S0 544 aa16.85■□□□□ 0.29
NUMB-216ENST00000555394 GOLPH3LQ9H4A5 285 aa16.85■□□□□ 0.29
NUMB-216ENST00000555394 DDX19AQ9NUU7 478 aaKnown RBP16.85■□□□□ 0.29
NUMB-216ENST00000555394 LEMD3Q9Y2U8 911 aa16.85■□□□□ 0.29
NUMB-216ENST00000555394 GPSM2P81274 684 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 SYNE3Q6ZMZ3 975 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 CCAR1Q8IX12 1150 aaKnown RBP16.84■□□□□ 0.29
NUMB-216ENST00000555394 SLC26A6Q9BXS9 759 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 ERICH2A1L162 156 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 ME1P48163 572 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 GRIK5Q16478 980 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 TXNRD1Q16881 649 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 CRY2Q49AN0 593 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 KRT40Q6A162 431 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 ESR2Q92731 530 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 CLSTN2Q9H4D0 955 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 XDHP47989 1333 aa16.84■□□□□ 0.29
NUMB-216ENST00000555394 ST5P78524 1137 aa16.83■□□□□ 0.29
NUMB-216ENST00000555394 MYSM1Q5VVJ2 828 aa16.83■□□□□ 0.29
NUMB-216ENST00000555394 NUP133Q8WUM0 1156 aa16.83■□□□□ 0.29
NUMB-216ENST00000555394 UBAC1Q9BSL1 405 aa16.83■□□□□ 0.29
NUMB-216ENST00000555394 DCP1AQ9NPI6 582 aaPredicted RBP16.83■□□□□ 0.29
NUMB-216ENST00000555394 RTEL1Q9NZ71 1219 aa16.83■□□□□ 0.29
NUMB-216ENST00000555394 CCDC192P0DO97 292 aa16.83■□□□□ 0.28
NUMB-216ENST00000555394 GUCY1A2P33402 732 aa16.83■□□□□ 0.28
NUMB-216ENST00000555394 TIAM2Q8IVF5 1701 aa16.83■□□□□ 0.28
NUMB-216ENST00000555394 DZIP1Q86YF9 867 aaKnown RBP16.83■□□□□ 0.28
NUMB-216ENST00000555394 LINC00301Q8NCQ3 95 aa16.83■□□□□ 0.28
NUMB-216ENST00000555394 TDRD7Q8NHU6 1098 aaKnown RBP16.83■□□□□ 0.28
NUMB-216ENST00000555394 USP25Q9UHP3 1055 aa16.83■□□□□ 0.28
NUMB-216ENST00000555394 PCDHA7Q9UN72 937 aa16.83■□□□□ 0.28
NUMB-216ENST00000555394 TNKSO95271 1327 aa16.82■□□□□ 0.28
NUMB-216ENST00000555394 CYP2D6P10635 497 aa16.82■□□□□ 0.28
NUMB-216ENST00000555394 SEC23AQ15436 765 aa16.82■□□□□ 0.28
NUMB-216ENST00000555394 RTN1Q16799 776 aa16.82■□□□□ 0.28
NUMB-216ENST00000555394 SLC4A8Q2Y0W8 1093 aa16.82■□□□□ 0.28
NUMB-216ENST00000555394 TYRO3Q06418 890 aa16.82■□□□□ 0.28
NUMB-216ENST00000555394 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
NUMB-216ENST00000555394 BRAPQ7Z569 592 aa16.82■□□□□ 0.28
NUMB-216ENST00000555394 ZNF654Q8IZM8 581 aa16.82■□□□□ 0.28
NUMB-216ENST00000555394 IFNAR1P17181 557 aa16.81■□□□□ 0.28
NUMB-216ENST00000555394 SNW1Q13573 536 aaKnown RBP16.81■□□□□ 0.28
NUMB-216ENST00000555394 UVSSAQ2YD98 709 aa16.81■□□□□ 0.28
NUMB-216ENST00000555394 TMTC2Q8N394 836 aa16.81■□□□□ 0.28
NUMB-216ENST00000555394 CRNKL1Q9BZJ0 848 aaKnown RBP16.81■□□□□ 0.28
NUMB-216ENST00000555394 MRVI1Q9Y6F6 885 aa16.81■□□□□ 0.28
NUMB-216ENST00000555394 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
NUMB-216ENST00000555394 FMNL1O95466 1100 aaPredicted RBP16.81■□□□□ 0.28
NUMB-216ENST00000555394 RBM43Q6ZSC3 357 aaKnown RBP16.81■□□□□ 0.28
NUMB-216ENST00000555394 ENAHQ8N8S7 591 aaPredicted RBP16.81■□□□□ 0.28
NUMB-216ENST00000555394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.8■□□□□ 0.28
NUMB-216ENST00000555394 UFL1O94874 794 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 STK38Q15208 465 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 DIXDC1Q155Q3 683 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 FANCBQ8NB91 859 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 ZSCAN10Q96SZ4 725 aaPredicted RBP16.8■□□□□ 0.28
NUMB-216ENST00000555394 MTA3Q9BTC8 594 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 LDHBP07195 334 aaKnown RBP16.8■□□□□ 0.28
NUMB-216ENST00000555394 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
NUMB-216ENST00000555394 POLR3EQ9NVU0 708 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 FGRP09769 529 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 SF3A1Q15459 793 aaKnown RBP16.8■□□□□ 0.28
NUMB-216ENST00000555394 SPTY2D1Q68D10 685 aaPredicted RBP16.8■□□□□ 0.28
NUMB-216ENST00000555394 NBPF11Q86T75 865 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 FSIP1Q8NA03 581 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 ENGASEQ8NFI3 743 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 WDR66Q8TBY9 1149 aa16.8■□□□□ 0.28
NUMB-216ENST00000555394 ZNF804AQ7Z570 1209 aa16.79■□□□□ 0.28
NUMB-216ENST00000555394 NMT2O60551 498 aa16.79■□□□□ 0.28
NUMB-216ENST00000555394 FAM47AQ5JRC9 791 aa16.79■□□□□ 0.28
NUMB-216ENST00000555394 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
NUMB-216ENST00000555394 CRACR2BQ8N4Y2 399 aaPredicted RBP16.79■□□□□ 0.28
NUMB-216ENST00000555394 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
NUMB-216ENST00000555394 UBR3Q6ZT12 1888 aa16.79■□□□□ 0.28
NUMB-216ENST00000555394 A0A1B0GVL5 298 aa16.78■□□□□ 0.28
NUMB-216ENST00000555394 SPTLC2O15270 562 aa16.78■□□□□ 0.28
NUMB-216ENST00000555394 AP5Z1O43299 807 aa16.78■□□□□ 0.28
NUMB-216ENST00000555394 USP17L8P0C7I0 530 aa16.78■□□□□ 0.28
NUMB-216ENST00000555394 PLCB2Q00722 1185 aa16.78■□□□□ 0.28
NUMB-216ENST00000555394 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms