RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 SPATA32Q96LK8 384 aa8.21□□□□□ -1.1
FOXN3-206ENST00000554005 USP21Q9UK80 565 aa8.21□□□□□ -1.1
FOXN3-206ENST00000554005 GFRA2O00451 464 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 ALX3O95076 343 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 SLFN14P0C7P3 912 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 ATF4P18848 351 aaPredicted RBP8.2□□□□□ -1.1
FOXN3-206ENST00000554005 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
FOXN3-206ENST00000554005 ARID5AQ03989 594 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 CWF19L2Q2TBE0 894 aaKnown RBP8.2□□□□□ -1.1
FOXN3-206ENST00000554005 AKAP4Q5JQC9 854 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 ALYREFQ86V81 257 aaKnown RBP8.2□□□□□ -1.1
FOXN3-206ENST00000554005 NACC1Q96RE7 527 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 GMLQ99445 158 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 AKTIPQ9H8T0 292 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 CYP4F12Q9HCS2 524 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 GINM1Q9NU53 330 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 PPP1R9AQ9ULJ8 1098 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 EFR3BQ9Y2G0 817 aa8.2□□□□□ -1.1
FOXN3-206ENST00000554005 DCDC2CA8MYV0 355 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 C9orf172C9J069 976 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 TMPRSS2O15393 492 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 TIAF1O95411 115 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 APBA3O96018 575 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 ADH5P11766 374 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 SOX9P48436 509 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 ID3Q02535 119 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 Q6ZS46 218 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 HDXQ7Z353 690 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 VPS37DQ86XT2 251 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 SEC16BQ96JE7 1060 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 BRMS1Q9HCU9 246 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 POLR3KQ9Y2Y1 108 aaPredicted RBP8.19□□□□□ -1.1
FOXN3-206ENST00000554005 SNCAIPQ9Y6H5 919 aa8.19□□□□□ -1.1
FOXN3-206ENST00000554005 FGRP09769 529 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 DRD2P14416 443 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 NASPP49321 788 aaPredicted RBP8.18□□□□□ -1.1
FOXN3-206ENST00000554005 NRG1Q02297 640 aaPredicted RBP8.18□□□□□ -1.1
FOXN3-206ENST00000554005 COL9A2Q14055 689 aaPredicted RBP8.18□□□□□ -1.1
FOXN3-206ENST00000554005 ANKRD34AQ69YU3 496 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 CYFIP1Q7L576 1253 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 ELMO3Q96BJ8 720 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 CRIM1Q9NZV1 1036 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 STK17AQ9UEE5 414 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 PRKAG2Q9UGJ0 569 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 AP4E1Q9UPM8 1137 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 CSADQ9Y600 493 aa8.18□□□□□ -1.1
FOXN3-206ENST00000554005 NOS3P29474 1203 aa8.17□□□□□ -1.1
FOXN3-206ENST00000554005 ERVK-24P63145 666 aa8.17□□□□□ -1.1
FOXN3-206ENST00000554005 SOX4Q06945 474 aaPredicted RBP8.17□□□□□ -1.1
FOXN3-206ENST00000554005 ADGRE1Q14246 886 aa8.17□□□□□ -1.1
FOXN3-206ENST00000554005 MBTPS1Q14703 1052 aa8.17□□□□□ -1.1
FOXN3-206ENST00000554005 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
FOXN3-206ENST00000554005 FDX2Q6P4F2 183 aa8.17□□□□□ -1.1
FOXN3-206ENST00000554005 C12orf40Q86WS4 652 aa8.17□□□□□ -1.1
FOXN3-206ENST00000554005 MCF2L2Q86YR7 1114 aa8.17□□□□□ -1.1
FOXN3-206ENST00000554005 C12orf50Q8NA57 414 aaPredicted RBP8.17□□□□□ -1.1
FOXN3-206ENST00000554005 TANGO6Q9C0B7 1094 aa8.17□□□□□ -1.1
FOXN3-206ENST00000554005 HIF3AQ9Y2N7 669 aa8.17□□□□□ -1.1
FOXN3-206ENST00000554005 RNF225M0QZC1 329 aaPredicted RBP8.16□□□□□ -1.1
FOXN3-206ENST00000554005 GRIN3BO60391 1043 aa8.16□□□□□ -1.1
FOXN3-206ENST00000554005 RING1Q06587 406 aa8.16□□□□□ -1.1
FOXN3-206ENST00000554005 PPM1JQ5JR12 505 aa8.16□□□□□ -1.1
FOXN3-206ENST00000554005 REXO1Q8N1G1 1221 aaKnown RBP8.16□□□□□ -1.1
FOXN3-206ENST00000554005 C2CD4AQ8NCU7 369 aaPredicted RBP8.16□□□□□ -1.1
FOXN3-206ENST00000554005 WFDC12Q8WWY7 111 aa8.16□□□□□ -1.1
FOXN3-206ENST00000554005 FANCD2OSQ96PS1 177 aa8.16□□□□□ -1.1
FOXN3-206ENST00000554005 DISC1Q9NRI5 854 aa8.16□□□□□ -1.1
FOXN3-206ENST00000554005 TACC3Q9Y6A5 838 aa8.16□□□□□ -1.1
FOXN3-206ENST00000554005 PRAMEF27A3QJZ7 478 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 KRBA1A5PL33 1030 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 GLB1P16278 677 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 MCM4P33991 863 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 PREPP48147 710 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 IREB2P48200 963 aaKnown RBP8.15□□□□□ -1.1
FOXN3-206ENST00000554005 ZNF165P49910 485 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.15□□□□□ -1.13e-7■■□□□ 14
FOXN3-206ENST00000554005 GSX1Q9H4S2 264 aaPredicted RBP8.15□□□□□ -1.1
FOXN3-206ENST00000554005 PPT2Q9UMR5 302 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 PCDHB14Q9Y5E9 798 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 CORINQ9Y5Q5 1042 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 ACTL7BQ9Y614 415 aa8.15□□□□□ -1.1
FOXN3-206ENST00000554005 PRR36Q9H6K5 1346 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 NTF4P34130 210 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 CHRNA4P43681 627 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 CLCQ05315 142 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 ZBTB37Q5TC79 503 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 GK5Q6ZS86 529 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 DYMQ7RTS9 669 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 DCAF5Q96JK2 942 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 DRC1Q96MC2 740 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 UBL7Q96S82 380 aaPredicted RBP8.14□□□□□ -1.11
FOXN3-206ENST00000554005 CEP41Q9BYV8 373 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 ATXN3LQ9H3M9 355 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 EHMT1Q9H9B1 1298 aa8.14□□□□□ -1.11
FOXN3-206ENST00000554005 IGSF3O75054 1194 aa8.13□□□□□ -1.11
FOXN3-206ENST00000554005 ATE1O95260 518 aa8.13□□□□□ -1.11
FOXN3-206ENST00000554005 HTR3BO95264 441 aa8.13□□□□□ -1.11
FOXN3-206ENST00000554005 NEFMP07197 916 aa8.13□□□□□ -1.11
FOXN3-206ENST00000554005 CCDC81Q6ZN84 652 aa8.13□□□□□ -1.11
FOXN3-206ENST00000554005 TXNRD3Q86VQ6 643 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms