RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 ANKS1AQ92625 1134 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 DPF2Q92785 391 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 ZBED3Q96IU2 234 aaPredicted RBP12.87□□□□□ -0.35
PABPN1-203ENST00000553960 EHD4Q9H223 541 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 CHMP5Q9NZZ3 219 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 BAZ2AQ9UIF9 1905 aaKnown RBP12.87□□□□□ -0.35
PABPN1-203ENST00000553960 NAV1Q8NEY1 1877 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 ATRNL1Q5VV63 1379 aa12.86□□□□□ -0.35
PABPN1-203ENST00000553960 FZD9O00144 591 aa12.86□□□□□ -0.35
PABPN1-203ENST00000553960 APPP05067 770 aa12.86□□□□□ -0.35
PABPN1-203ENST00000553960 NOVP48745 357 aa12.86□□□□□ -0.35
PABPN1-203ENST00000553960 TDO2P48775 406 aa12.86□□□□□ -0.35
PABPN1-203ENST00000553960 DYNLL1P63167 89 aaKnown RBP12.86□□□□□ -0.35
PABPN1-203ENST00000553960 DIXDC1Q155Q3 683 aa12.86□□□□□ -0.35
PABPN1-203ENST00000553960 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
PABPN1-203ENST00000553960 MFSD6Q6ZSS7 791 aa12.86□□□□□ -0.35
PABPN1-203ENST00000553960 RALYLQ86SE5 291 aaKnown RBP12.86□□□□□ -0.35
PABPN1-203ENST00000553960 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
PABPN1-203ENST00000553960 AATFQ9NY61 560 aaKnown RBP eCLIP12.86□□□□□ -0.35
PABPN1-203ENST00000553960 TTF2Q9UNY4 1162 aaKnown RBP12.86□□□□□ -0.35
PABPN1-203ENST00000553960 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
PABPN1-203ENST00000553960 USP17L12C9JPN9 530 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 USP17L21D6R901 530 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 PFKFB2O60825 505 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 WDHD1O75717 1129 aaPredicted RBP12.85□□□□□ -0.35
PABPN1-203ENST00000553960 BTDP43251 543 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 ANTXR2P58335 489 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 ZNF280AP59817 542 aaPredicted RBP12.85□□□□□ -0.35
PABPN1-203ENST00000553960 GABPAQ06546 454 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 TNIP1Q15025 636 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 NIM1KQ8IY84 436 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 MAP3K14Q99558 947 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 DHX36Q9H2U1 1008 aaKnown RBP12.85□□□□□ -0.35
PABPN1-203ENST00000553960 DBNDD1Q9H9R9 158 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
PABPN1-203ENST00000553960 MYH1P12882 1939 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 SBF1O95248 1867 aa12.85□□□□□ -0.35
PABPN1-203ENST00000553960 PLIN4Q96Q06 1357 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 ENTPD3O75355 529 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 CRKP46108 304 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 NUCB2P80303 420 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 PDE4BQ07343 736 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 ILDR2Q71H61 639 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 AMOTL1Q8IY63 956 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
PABPN1-203ENST00000553960 SDR42E1Q8WUS8 393 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 ESR2Q92731 530 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 TPCN1Q9ULQ1 816 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 FLT1P17948 1338 aa12.84□□□□□ -0.35
PABPN1-203ENST00000553960 ZC3H4Q9UPT8 1303 aaKnown RBP12.84□□□□□ -0.35
PABPN1-203ENST00000553960 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
PABPN1-203ENST00000553960 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
PABPN1-203ENST00000553960 DHX16O60231 1041 aaKnown RBP12.83□□□□□ -0.36
PABPN1-203ENST00000553960 SART3Q15020 963 aaKnown RBP12.83□□□□□ -0.36
PABPN1-203ENST00000553960 ME3Q16798 604 aa12.83□□□□□ -0.36
PABPN1-203ENST00000553960 C16orf86Q6ZW13 317 aa12.83□□□□□ -0.36
PABPN1-203ENST00000553960 TTC6Q86TZ1 520 aa12.83□□□□□ -0.36
PABPN1-203ENST00000553960 SMARCC2Q8TAQ2 1214 aa12.83□□□□□ -0.36
PABPN1-203ENST00000553960 GTF3C6Q969F1 213 aa12.83□□□□□ -0.36
PABPN1-203ENST00000553960 ZSWIM5Q9P217 1185 aa12.83□□□□□ -0.36
PABPN1-203ENST00000553960 SWAP70Q9UH65 585 aa12.83□□□□□ -0.36
PABPN1-203ENST00000553960 PRC1O43663 620 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 CXCL9Q07325 125 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
PABPN1-203ENST00000553960 SEC23AQ15436 765 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 PPP4R3BQ5MIZ7 849 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 CDC42EP5Q6NZY7 148 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 Q6ZUG5 572 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 FAM83AQ86UY5 434 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 TEX11Q8IYF3 940 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 KCNQ5Q9NR82 932 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 ZNF277Q9NRM2 450 aaPredicted RBP12.82□□□□□ -0.36
PABPN1-203ENST00000553960 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 TACC3Q9Y6A5 838 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 NEDD4P46934 1319 aa12.82□□□□□ -0.36
PABPN1-203ENST00000553960 GREB1LQ9C091 1923 aaPredicted RBP12.82□□□□□ -0.36
PABPN1-203ENST00000553960 SPDYE2BA6NHP3 402 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 PSMD14O00487 310 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 SPDYE6P0CI01 402 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 LMNB1P20700 586 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 PDCP20941 246 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 PDIA3P30101 505 aaKnown RBP12.81□□□□□ -0.36
PABPN1-203ENST00000553960 HAND2P61296 217 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 HMGN5P82970 282 aaKnown RBP12.81□□□□□ -0.36
PABPN1-203ENST00000553960 MAP3K10Q02779 954 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 FAM177A1Q8N128 213 aaPredicted RBP12.81□□□□□ -0.36
PABPN1-203ENST00000553960 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 SYT17Q9BSW7 474 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 LY9Q9HBG7 655 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 MCM9Q9NXL9 1143 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
PABPN1-203ENST00000553960 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
PABPN1-203ENST00000553960 USP5P45974 858 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms