RNA–Protein interactions for RNA: ENST00000553917.5

RALGAPA1-205, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 723 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-205	ENST00000553917	OSMR	Q99650	979 aa		4.95	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ZCCHC4	Q9H5U6	513 aa		4.95	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	NSUN3	Q9H649	340 aa	Known RBP	4.95	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.95	□□□□□ -1.62
RALGAPA1-205	ENST00000553917		U3KQE9	123 aa		4.95	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ICMT	O60725	284 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ESRRA	P11474	423 aa	Predicted RBP	4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	TCF3	P15923	654 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	MAOB	P27338	520 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	IKZF1	Q13422	519 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	SF3B2	Q13435	895 aa	Known RBP	4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	TMEM67	Q5HYA8	995 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	SEZ6L2	Q6UXD5	910 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	NPAS4	Q8IUM7	802 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	C1orf127	Q8N9H9	656 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	TMEM102	Q8N9M5	508 aa	Predicted RBP	4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	EDEM1	Q92611	657 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	KIRREL1	Q96J84	757 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	SOX17	Q9H6I2	414 aa	Predicted RBP	4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	DCTN4	Q9UJW0	460 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	CTNND2	Q9UQB3	1225 aa		4.94	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	TMEM265	A0A087WTH1	108 aa		4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	VAMP1	P23763	118 aa		4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	MAPK1	P28482	360 aa		4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	DNM1	Q05193	864 aa	Known RBP	4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ZP2	Q05996	745 aa		4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ZNF211	Q13398	564 aa	Predicted RBP	4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ABTB2	Q8N961	1025 aa		4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	NXPE3	Q969Y0	559 aa		4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	TMPRSS5	Q9H3S3	457 aa		4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	KCNK12	Q9HB15	430 aa		4.93	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	CEACAM5	P06731	702 aa		4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	SYN1	P17600	705 aa		4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	BMP7	P18075	431 aa		4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	MPST	P25325	297 aa		4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	PDE12	Q6L8Q7	609 aa	Known RBP	4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ASB16	Q96NS5	453 aa		4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ZKSCAN3	Q9BRR0	538 aa		4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	IRF2BPL	Q9H1B7	796 aa		4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	PARD6A	Q9NPB6	346 aa		4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	PITPNM2	Q9BZ72	1349 aa		4.92	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	PDGFA	P04085	211 aa		4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	CTSB	P07858	339 aa		4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	ITGAE	P38570	1179 aa		4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	FKBP4	Q02790	459 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	POU4F3	Q15319	338 aa		4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	C8orf34	Q49A92	452 aa		4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	NOM1	Q5C9Z4	860 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	GGN	Q86UU5	652 aa		4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	HELQ	Q8TDG4	1101 aa		4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	CHRD	Q9H2X0	955 aa		4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	CD320	Q9NPF0	282 aa		4.91	□□□□□ -1.62
RALGAPA1-205	ENST00000553917	HMGB1	P09429	215 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	EIF1AX	P47813	144 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	XKR5	Q6UX68	686 aa		4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	C8orf37	Q96NL8	207 aa		4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	PIDD1	Q9HB75	910 aa		4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	ANO2	Q9NQ90	1003 aa		4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	POLI	Q9UNA4	740 aa		4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	PLAGL2	Q9UPG8	496 aa		4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	SMG5	Q9UPR3	1016 aa	Known RBP	4.9	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	LEFTY1	O75610	366 aa		4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	CYP11A1	P05108	521 aa		4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	OXCT1	P55809	520 aa		4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	FGD1	P98174	961 aa		4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	CYFIP1	Q7L576	1253 aa		4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	PRRT2	Q7Z6L0	340 aa	Predicted RBP	4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	FBXO33	Q7Z6M2	555 aa		4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	TTC16	Q8NEE8	873 aa		4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	CORO1B	Q9BR76	489 aa		4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	EPB41L4B	Q9H329	900 aa		4.89	□□□□□ -1.63
RALGAPA1-205	ENST00000553917		A0A0G2JLL6	359 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	ETV2	O00321	342 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	EREG	O14944	169 aa		4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	NDUFB5	O43674	189 aa		4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	EIF4EBP3	O60516	100 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	FAM13A	O94988	1023 aa		4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	MZF1	P28698	734 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	LINC00310	P59036	64 aa		4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	ZC3H6	P61129	1189 aa	Known RBP	4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	PDE3A	Q14432	1141 aa		4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	NFIX	Q14938	502 aa		4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	EAPP	Q56P03	285 aa	Predicted RBP	4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	ASB11	Q8WXH4	323 aa		4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	NRSN2	Q9GZP1	204 aa		4.88	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	METTL12	A8MUP2	240 aa		4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	FZD6	O60353	706 aa		4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	ARHGAP4	P98171	946 aa		4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	KCNN1	Q92952	543 aa		4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	PMEPA1	Q969W9	287 aa		4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	RBCK1	Q9BYM8	510 aa		4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	ZFYVE1	Q9HBF4	777 aa		4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	MKNK2	Q9HBH9	465 aa		4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	CCDC87	Q9NVE4	849 aa		4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.87	□□□□□ -1.63
RALGAPA1-205	ENST00000553917	RNGTT	O60942	597 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 80 ms