RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SEPT6Q14141 434 aa7.65□□□□□ -1.18
CPSF6-206ENST00000550987 IKBKEQ14164 716 aa7.65□□□□□ -1.18
CPSF6-206ENST00000550987 TNNI3KQ59H18 835 aa7.65□□□□□ -1.18
CPSF6-206ENST00000550987 HNRNPLLQ8WVV9 542 aaKnown RBP7.65□□□□□ -1.18
CPSF6-206ENST00000550987 MKL1Q969V6 931 aa7.65□□□□□ -1.18
CPSF6-206ENST00000550987 SH2B1Q9NRF2 756 aaPredicted RBP7.65□□□□□ -1.18
CPSF6-206ENST00000550987 TRIM33Q9UPN9 1127 aa7.65□□□□□ -1.18
CPSF6-206ENST00000550987 WIZO95785 1651 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 C2CD2LO14523 706 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 SMAD7O15105 426 aaKnown RBP7.64□□□□□ -1.19
CPSF6-206ENST00000550987 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 ALAS2P22557 587 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 CDC27P30260 824 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 CDC25BP30305 580 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 ADH7P40394 386 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 MPP2Q14168 576 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 GK5Q6ZS86 529 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 GMPR2Q9P2T1 348 aaKnown RBP7.64□□□□□ -1.19
CPSF6-206ENST00000550987 TBX22Q9Y458 520 aa7.64□□□□□ -1.19
CPSF6-206ENST00000550987 C3P01024 1663 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 C11orf95C9JLR9 678 aaPredicted RBP7.63□□□□□ -1.19
CPSF6-206ENST00000550987 KLF4O43474 513 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 RGS9O75916 674 aaPredicted RBP7.63□□□□□ -1.19
CPSF6-206ENST00000550987 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
CPSF6-206ENST00000550987 ADH6P28332 368 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 ARL4DP49703 201 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 CHMP4BP1P59074 171 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 VN1R5Q7Z5H4 357 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 ANKRD13AQ8IZ07 590 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 GRIN3AQ8TCU5 1115 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 KCNB2Q92953 911 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 ADAM19Q9H013 955 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 BRMS1Q9HCU9 246 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 AVENQ9NQS1 362 aaPredicted RBP7.63□□□□□ -1.19
CPSF6-206ENST00000550987 SOX13Q9UN79 622 aa7.63□□□□□ -1.19
CPSF6-206ENST00000550987 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.63□□□□□ -1.19
CPSF6-206ENST00000550987 UHRF1BP1LA0JNW5 1464 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 TCOF1Q13428 1488 aaKnown RBP7.62□□□□□ -1.19
CPSF6-206ENST00000550987 FAM221AA4D161 298 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 CILPO75339 1184 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 ESRRAP11474 423 aaPredicted RBP7.62□□□□□ -1.19
CPSF6-206ENST00000550987 IMPDH2P12268 514 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 GSTM4Q03013 218 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 SERINC3Q13530 473 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 PSAPL1Q6NUJ1 521 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 FAM117BQ6P1L5 589 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 ZNF662Q6ZS27 426 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 CACTIN-AS1Q8N1I8 211 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 SHDQ96IW2 340 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 LRRC3Q9BY71 257 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 MRPL42Q9Y6G3 142 aaKnown RBP7.62□□□□□ -1.19
CPSF6-206ENST00000550987 KDM5BQ9UGL1 1544 aa7.62□□□□□ -1.19
CPSF6-206ENST00000550987 SUPT6HQ7KZ85 1726 aaKnown RBP7.61□□□□□ -1.19
CPSF6-206ENST00000550987 SBNO2Q9Y2G9 1366 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 NEURL1BA8MQ27 555 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 EIF4EBP3O60516 100 aaPredicted RBP7.61□□□□□ -1.19
CPSF6-206ENST00000550987 AP3B2Q13367 1082 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 PPP2R5EQ16537 467 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 RASIP1Q5U651 963 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 MAP1SQ66K74 1059 aaPredicted RBP7.61□□□□□ -1.19
CPSF6-206ENST00000550987 REC114Q7Z4M0 266 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 REXO1Q8N1G1 1221 aaKnown RBP7.61□□□□□ -1.19
CPSF6-206ENST00000550987 OR6P1Q8NGX9 317 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 SLC7A3Q8WY07 619 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 ACSBG1Q96GR2 724 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 DEPDC7Q96QD5 511 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 ST7Q9NRC1 585 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 FRRS1LQ9P0K9 344 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 NWD1Q149M9 1564 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 PLA2R1Q13018 1463 aa7.61□□□□□ -1.19
CPSF6-206ENST00000550987 ADARB2-AS1A8MUL3 147 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 ARAFP10398 606 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 GIPRP48546 466 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 JAZF1Q86VZ6 243 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 IL22RA1Q8N6P7 574 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 STK35Q8TDR2 534 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 NUDT8Q8WV74 236 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 LPIN3Q9BQK8 851 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 ZC3H12CQ9C0D7 883 aaKnown RBP7.6□□□□□ -1.19
CPSF6-206ENST00000550987 ACTR10Q9NZ32 417 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 PTPRGP23470 1445 aa7.6□□□□□ -1.19
CPSF6-206ENST00000550987 KDM5CP41229 1560 aa7.59□□□□□ -1.19
CPSF6-206ENST00000550987 SOX1O00570 391 aaPredicted RBP7.59□□□□□ -1.19
CPSF6-206ENST00000550987 GSTP1P09211 210 aaKnown RBP7.59□□□□□ -1.19
CPSF6-206ENST00000550987 HSD3B2P26439 372 aa7.59□□□□□ -1.19
CPSF6-206ENST00000550987 MAP2K3P46734 347 aa7.59□□□□□ -1.19
CPSF6-206ENST00000550987 RPL6Q02878 288 aaKnown RBP7.59□□□□□ -1.19
CPSF6-206ENST00000550987 CLCQ05315 142 aa7.59□□□□□ -1.19
CPSF6-206ENST00000550987 IFRD2Q12894 506 aaPredicted RBP7.59□□□□□ -1.19
CPSF6-206ENST00000550987 EGFLAMQ63HQ2 1017 aa7.59□□□□□ -1.19
CPSF6-206ENST00000550987 LARP1BQ659C4 914 aaKnown RBP7.59□□□□□ -1.19
CPSF6-206ENST00000550987 SNTG2Q9NY99 539 aa7.59□□□□□ -1.19
CPSF6-206ENST00000550987 NAGPAQ9UK23 515 aa7.59□□□□□ -1.19
CPSF6-206ENST00000550987 PCDHB14Q9Y5E9 798 aa7.59□□□□□ -1.19
CPSF6-206ENST00000550987 AKNAQ7Z591 1439 aa7.59□□□□□ -1.19
CPSF6-206ENST00000550987 VWDEQ8N2E2 1590 aa7.59□□□□□ -1.2
CPSF6-206ENST00000550987 CHD4Q14839 1912 aa7.58□□□□□ -1.2
CPSF6-206ENST00000550987 ELOA3CA0A087WX78 387 aaPredicted RBP7.58□□□□□ -1.2
CPSF6-206ENST00000550987 ELOA3DA6NLF2 546 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms