RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 NBR1Q14596 966 aa8.82□□□□□ -1
DEPDC4-208ENST00000549341 DLGAP5Q15398 846 aa8.82□□□□□ -1
DEPDC4-208ENST00000549341 STRIP1Q5VSL9 837 aa8.82□□□□□ -1
DEPDC4-208ENST00000549341 ZBTB38Q8NAP3 1195 aaPredicted RBP8.82□□□□□ -1
DEPDC4-208ENST00000549341 OPTNQ96CV9 577 aa8.82□□□□□ -1
DEPDC4-208ENST00000549341 PCDHAC2Q9Y5I4 1007 aa8.82□□□□□ -1
DEPDC4-208ENST00000549341 POLR2AP24928 1970 aaKnown RBP8.82□□□□□ -1
DEPDC4-208ENST00000549341 VCANP13611 3396 aa8.82□□□□□ -1
DEPDC4-208ENST00000549341 RBBP6Q7Z6E9 1792 aaKnown RBP8.81□□□□□ -1
DEPDC4-208ENST00000549341 CACNA1FO60840 1977 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 CCL15-CCL14A0A0B4J2E2 113 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 HSP90B1P14625 803 aaKnown RBP8.81□□□□□ -1
DEPDC4-208ENST00000549341 CCT4P50991 539 aaKnown RBP8.81□□□□□ -1
DEPDC4-208ENST00000549341 PRSS12P56730 875 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 GTF2IP78347 998 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 KIF22Q14807 665 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 MTFR1Q15390 333 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 CCL15Q16663 113 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 NBPF12Q5TAG4 269 aaPredicted RBP8.81□□□□□ -1
DEPDC4-208ENST00000549341 RIC3Q7Z5B4 369 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 TMEM57Q8N5G2 664 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 BRI3BPQ8WY22 251 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 CDC5LQ99459 802 aaKnown RBP8.81□□□□□ -1
DEPDC4-208ENST00000549341 MYD88Q99836 296 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 HTATIP2Q9BUP3 242 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 COA1Q9GZY4 146 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 ZFYVE28Q9HCC9 887 aa8.81□□□□□ -1
DEPDC4-208ENST00000549341 MYO1BO43795 1136 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 KCNJ4P48050 445 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 MAP3K11Q16584 847 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 TSR1Q2NL82 804 aaKnown RBP8.8□□□□□ -1
DEPDC4-208ENST00000549341 SUPT20HL1Q3ZLR7 823 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 TTLL5Q6EMB2 1281 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 TXNRD3Q86VQ6 643 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 ANKRD13AQ8IZ07 590 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 FAM43AQ8N2R8 423 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 ZNF775Q96BV0 537 aaPredicted RBP8.8□□□□□ -1
DEPDC4-208ENST00000549341 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 DBF4Q9UBU7 674 aaPredicted RBP8.8□□□□□ -1
DEPDC4-208ENST00000549341 HDAC5Q9UQL6 1122 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 JAG2Q9Y219 1238 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 PPP2R3BQ9Y5P8 575 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 NR2E3Q9Y5X4 410 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 ZNF804BA4D1E1 1349 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 AOX1Q06278 1338 aa8.8□□□□□ -1
DEPDC4-208ENST00000549341 PDE8AO60658 829 aa8.79□□□□□ -1
DEPDC4-208ENST00000549341 WDHD1O75717 1129 aaPredicted RBP8.79□□□□□ -1
DEPDC4-208ENST00000549341 FARP2O94887 1054 aaPredicted RBP8.79□□□□□ -1
DEPDC4-208ENST00000549341 DDX58O95786 925 aaKnown RBP8.79□□□□□ -1
DEPDC4-208ENST00000549341 RLBP1P12271 317 aa8.79□□□□□ -1
DEPDC4-208ENST00000549341 RBM5P52756 815 aaKnown RBP eCLIP8.79□□□□□ -1
DEPDC4-208ENST00000549341 CTSWP56202 376 aa8.79□□□□□ -1
DEPDC4-208ENST00000549341 LACTBP83111 547 aaPredicted RBP8.79□□□□□ -1
DEPDC4-208ENST00000549341 FKBP5Q13451 457 aaPredicted RBP8.79□□□□□ -1
DEPDC4-208ENST00000549341 Q7L0L9 218 aa8.79□□□□□ -1
DEPDC4-208ENST00000549341 ZBED3Q96IU2 234 aaPredicted RBP8.79□□□□□ -1
DEPDC4-208ENST00000549341 PRO3102Q9H379 93 aa8.79□□□□□ -1
DEPDC4-208ENST00000549341 HYPKQ9NX55 129 aa8.79□□□□□ -1
DEPDC4-208ENST00000549341 BIN2Q9UBW5 565 aaPredicted RBP8.79□□□□□ -1
DEPDC4-208ENST00000549341 MINPP1Q9UNW1 487 aa8.79□□□□□ -1
DEPDC4-208ENST00000549341 TESPA1A2RU30 521 aaPredicted RBP8.78□□□□□ -1
DEPDC4-208ENST00000549341 SMAPO00193 183 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 ZBTB7BO15156 539 aaPredicted RBP8.78□□□□□ -1
DEPDC4-208ENST00000549341 PCCAP05165 728 aaPredicted RBP8.78□□□□□ -1
DEPDC4-208ENST00000549341 GTF2A2P52657 109 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 FLIIQ13045 1269 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 VGLL4Q14135 290 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 RASA3Q14644 834 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 CFAP100Q494V2 611 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 DEFB123Q8N688 67 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 RAET1EQ8TD07 263 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 ZNF516Q92618 1163 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 TATDN2Q93075 761 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 GREM2Q9H772 168 aa8.78□□□□□ -1
DEPDC4-208ENST00000549341 CWC25Q9NXE8 425 aaPredicted RBP8.78□□□□□ -1
DEPDC4-208ENST00000549341 TTC28Q96AY4 2481 aa8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 SPDYE16A6NNV3 312 aaPredicted RBP8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 USP2O75604 605 aaPredicted RBP8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 GNAI3P08754 354 aa8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 CCL5P13501 91 aa8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 TRIM28Q13263 835 aaKnown RBP8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 HDAC1Q13547 482 aaPredicted RBP8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 CERS5Q8N5B7 392 aa8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 NKX2-3Q8TAU0 364 aa8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 RNF208Q9H0X6 261 aa8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 ZBTB40Q9NUA8 1239 aa8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 BSDC1Q9NW68 430 aaPredicted RBP8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 STAP2Q9UGK3 403 aa8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 CSADQ9Y600 493 aa8.77□□□□□ -1.01
DEPDC4-208ENST00000549341 SPTBN5Q9NRC6 3674 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 A0A1W2PPC1 479 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 UNCXA6NJT0 531 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 HMMRO75330 724 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 FMNL1O95466 1100 aaPredicted RBP8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 GRK4P32298 578 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 IGHMBP2P38935 993 aaKnown RBP8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 GJA8P48165 433 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 MMP14P50281 582 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 SLC4A10Q6U841 1118 aa8.76□□□□□ -1.01
DEPDC4-208ENST00000549341 COL25A1Q9BXS0 654 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 824.8 ms