RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 NMT2O60551 498 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 TERF1P54274 439 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 FANCCQ00597 558 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 SMYD4Q8IYR2 804 aaPredicted RBP15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 EEF2KMTQ96G04 330 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 ZSWIM4Q9H7M6 989 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 MAPK8IP1Q9UQF2 711 aa15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 V9GY48 417 aaPredicted RBP15.74■□□□□ 0.11
PRPF40B-209ENST00000548825 PATL2C9JE40 543 aaKnown RBP15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 CCDC152Q4G0S7 254 aa15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 PLIN2Q99541 437 aa15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 LY9Q9HBG7 655 aa15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 PCDHB6Q9Y5E3 794 aa15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 SALL1Q9NSC2 1324 aa15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 CDC25AP30304 524 aa15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 ZNF174Q15697 407 aa15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 AGXT2Q9BYV1 514 aa15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 AATFQ9NY61 560 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 DNAI1Q9UI46 699 aa15.73■□□□□ 0.11
PRPF40B-209ENST00000548825 COL5A2P05997 1499 aaPredicted RBP15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 LOC102724428A0A0B4J2F2 783 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 GSG1L2A8MUP6 293 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 YEATS4O95619 227 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 SIK1P57059 783 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 SLC39A14Q15043 492 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 SLC51AQ86UW1 340 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 POLR3EQ9NVU0 708 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 SERTAD1Q9UHV2 236 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 TACC3Q9Y6A5 838 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 JCADQ9P266 1359 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 NKX1-1Q15270 411 aaPredicted RBP15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 ELF2Q15723 593 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 RBM43Q6ZSC3 357 aaKnown RBP15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 ADGRA1Q86SQ6 560 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 CCDC87Q9NVE4 849 aa15.72■□□□□ 0.11
PRPF40B-209ENST00000548825 ADKP55263 362 aaKnown RBP15.71■□□□□ 0.11
PRPF40B-209ENST00000548825 UBE3CQ15386 1083 aa15.71■□□□□ 0.11
PRPF40B-209ENST00000548825 IGDCC4Q8TDY8 1250 aa15.71■□□□□ 0.11
PRPF40B-209ENST00000548825 MAGEB6P1A0A0J9YX57 407 aa15.71■□□□□ 0.11
PRPF40B-209ENST00000548825 TOP1P11387 765 aaKnown RBP15.71■□□□□ 0.11
PRPF40B-209ENST00000548825 AXDND1Q5T1B0 1012 aaPredicted RBP15.71■□□□□ 0.11
PRPF40B-209ENST00000548825 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.71■□□□□ 0.11
PRPF40B-209ENST00000548825 URI1O94763 535 aaPredicted RBP15.71■□□□□ 0.1
PRPF40B-209ENST00000548825 FAM98CQ17RN3 349 aaKnown RBP15.71■□□□□ 0.1
PRPF40B-209ENST00000548825 ERFEQ4G0M1 354 aa15.71■□□□□ 0.1
PRPF40B-209ENST00000548825 NOM1Q5C9Z4 860 aaKnown RBP15.71■□□□□ 0.1
PRPF40B-209ENST00000548825 C3orf67Q6ZVT6 689 aa15.71■□□□□ 0.1
PRPF40B-209ENST00000548825 GPIHBP1Q8IV16 184 aa15.71■□□□□ 0.1
PRPF40B-209ENST00000548825 GPR101Q96P66 508 aaPredicted RBP15.71■□□□□ 0.1
PRPF40B-209ENST00000548825 TNKSO95271 1327 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 PRR29P0C7W0 189 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 CMA1P23946 247 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 KLRK1P26718 216 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 NLRP12P59046 1061 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 SOS2Q07890 1332 aaPredicted RBP15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 RAD21O60216 631 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 TRIM28Q13263 835 aaKnown RBP15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 ANKRD18AQ8IVF6 992 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 ZNF654Q8IZM8 581 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 KIF18AQ8NI77 898 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 CCDC94Q9BW85 323 aaPredicted RBP15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 USP17L12C9JPN9 530 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 USP17L21D6R901 530 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 PPARAQ07869 468 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 ITPK1Q13572 414 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 DHX8Q14562 1220 aaKnown RBP15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 IFIT1BQ5T764 474 aaKnown RBP15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 NOSTRINQ8IVI9 506 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 KRI1Q8N9T8 703 aaKnown RBP15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 MRFAP1L1Q96HT8 127 aa15.7■□□□□ 0.1
PRPF40B-209ENST00000548825 CPDO75976 1380 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 SMTNL1A8MU46 457 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 PLEKHA8P1O95397 391 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 EPSTI1Q96J88 318 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 DESI2Q9BSY9 194 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 RFX7Q2KHR2 1363 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 VWA3AA6NCI4 1184 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 PDE4BQ07343 736 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 NCBP1Q09161 790 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 KARSQ15046 597 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 CAVIN4Q5BKX8 364 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 TMEM87BQ96K49 555 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 BLZF1Q9H2G9 400 aa15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 SRP68Q9UHB9 627 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-209ENST00000548825 CAVIN2O95810 425 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 PTF1AQ7RTS3 328 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 FANCBQ8NB91 859 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 UIMC1Q96RL1 719 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 KRT23Q9C075 422 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 NFE2L3Q9Y4A8 694 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 CYP2D6P10635 497 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 NBPF11Q86T75 865 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 VGLL2Q8N8G2 317 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 FAM217BQ9NTX9 383 aaPredicted RBP15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 RIC1Q4ADV7 1423 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 MROH5Q6ZUA9 1318 aa15.68■□□□□ 0.1
PRPF40B-209ENST00000548825 A0A1W2PQ27 194 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms