RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZC3H12AQ5D1E8 599 aaKnown RBP8.83□□□□□ -1
SNHG1-224ENST00000545688 ANKRD24Q8TF21 1146 aa8.83□□□□□ -1
SNHG1-224ENST00000545688 ACSBG1Q96GR2 724 aa8.83□□□□□ -1
SNHG1-224ENST00000545688 CACNA2D2Q9NY47 1150 aa8.83□□□□□ -1
SNHG1-224ENST00000545688 CELA3AP09093 270 aa8.82□□□□□ -1
SNHG1-224ENST00000545688 RASIP1Q5U651 963 aa8.82□□□□□ -1
SNHG1-224ENST00000545688 OGFOD3Q6PK18 319 aa8.82□□□□□ -1
SNHG1-224ENST00000545688 SAMM50Q9Y512 469 aa8.82□□□□□ -1
SNHG1-224ENST00000545688 ANKRD33BA6NCL7 494 aa8.81□□□□□ -1
SNHG1-224ENST00000545688 RNF19AQ9NV58 838 aa8.81□□□□□ -1
SNHG1-224ENST00000545688 CCDC39Q9UFE4 941 aa8.81□□□□□ -1
SNHG1-224ENST00000545688 ZC3H7BQ9UGR2 993 aaKnown RBP8.81□□□□□ -1
SNHG1-224ENST00000545688 FAM87AP0C7U9 286 aa8.8□□□□□ -1
SNHG1-224ENST00000545688 GNA15P30679 374 aa8.8□□□□□ -1
SNHG1-224ENST00000545688 ERVK-24P63145 666 aa8.8□□□□□ -1
SNHG1-224ENST00000545688 MCTP1Q6DN14 999 aa8.8□□□□□ -1
SNHG1-224ENST00000545688 LLGL2Q6P1M3 1020 aa8.8□□□□□ -1
SNHG1-224ENST00000545688 ISL2Q96A47 359 aa8.8□□□□□ -1
SNHG1-224ENST00000545688 ANGEL1Q9UNK9 670 aaKnown RBP8.8□□□□□ -1
SNHG1-224ENST00000545688 CSADQ9Y600 493 aa8.8□□□□□ -1
SNHG1-224ENST00000545688 PRPF40AO75400 957 aaKnown RBP8.79□□□□□ -1
SNHG1-224ENST00000545688 TRIM37O94972 964 aa8.79□□□□□ -1
SNHG1-224ENST00000545688 PRNPP04156 253 aa8.79□□□□□ -1
SNHG1-224ENST00000545688 IRAK1P51617 712 aa8.79□□□□□ -1
SNHG1-224ENST00000545688 PCNX4Q63HM2 1172 aa8.79□□□□□ -1
SNHG1-224ENST00000545688 NFXL1Q6ZNB6 911 aa8.79□□□□□ -1
SNHG1-224ENST00000545688 RNF214Q8ND24 703 aa8.79□□□□□ -1
SNHG1-224ENST00000545688 FRMD6Q96NE9 622 aa8.79□□□□□ -1
SNHG1-224ENST00000545688 BSDC1Q9NW68 430 aaPredicted RBP8.79□□□□□ -1
SNHG1-224ENST00000545688 PCOLCE2Q9UKZ9 415 aa8.79□□□□□ -1
SNHG1-224ENST00000545688 TTF2Q9UNY4 1162 aaKnown RBP8.79□□□□□ -1
SNHG1-224ENST00000545688 DCDC2CA8MYV0 355 aa8.78□□□□□ -1
SNHG1-224ENST00000545688 EIF4BP23588 611 aaKnown RBP8.78□□□□□ -1
SNHG1-224ENST00000545688 COL19A1Q14993 1142 aa8.78□□□□□ -1
SNHG1-224ENST00000545688 LRRC14Q15048 493 aa8.78□□□□□ -1
SNHG1-224ENST00000545688 CYP27C1Q4G0S4 372 aa8.78□□□□□ -1
SNHG1-224ENST00000545688 PPM1JQ5JR12 505 aa8.78□□□□□ -1
SNHG1-224ENST00000545688 VSIG10LQ86VR7 867 aa8.78□□□□□ -1
SNHG1-224ENST00000545688 LEFTY1O75610 366 aa8.77□□□□□ -1.01
SNHG1-224ENST00000545688 EAPPQ56P03 285 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-224ENST00000545688 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNHG1-224ENST00000545688 DUSP9Q99956 384 aaKnown RBP8.77□□□□□ -1.01
SNHG1-224ENST00000545688 SSU72Q9NP77 194 aaKnown RBP8.77□□□□□ -1.01
SNHG1-224ENST00000545688 PCDHA4Q9UN74 947 aa8.77□□□□□ -1.01
SNHG1-224ENST00000545688 COL17A1Q9UMD9 1497 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-224ENST00000545688 SV2BQ7L1I2 683 aa8.76□□□□□ -1.01
SNHG1-224ENST00000545688 C12orf40Q86WS4 652 aa8.76□□□□□ -1.01
SNHG1-224ENST00000545688 ABI1Q8IZP0 508 aa8.76□□□□□ -1.01
SNHG1-224ENST00000545688 CYP8B1Q9UNU6 501 aa8.76□□□□□ -1.01
SNHG1-224ENST00000545688 AK5Q9Y6K8 562 aa8.76□□□□□ -1.01
SNHG1-224ENST00000545688 NTF4P34130 210 aa8.75□□□□□ -1.01
SNHG1-224ENST00000545688 UBE3DQ7Z6J8 389 aa8.75□□□□□ -1.01
SNHG1-224ENST00000545688 NPAS4Q8IUM7 802 aa8.75□□□□□ -1.01
SNHG1-224ENST00000545688 DUSP23Q9BVJ7 150 aa8.75□□□□□ -1.01
SNHG1-224ENST00000545688 PTPN11Q06124 597 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-224ENST00000545688 RING1Q06587 406 aa8.74□□□□□ -1.01
SNHG1-224ENST00000545688 SCARA3Q6AZY7 606 aa8.74□□□□□ -1.01
SNHG1-224ENST00000545688 DNAJC14Q6Y2X3 702 aaPredicted RBP8.74□□□□□ -1.01
SNHG1-224ENST00000545688 TOP6BLQ8N6T0 577 aa8.74□□□□□ -1.01
SNHG1-224ENST00000545688 FAM181AQ8N9Y4 354 aa8.74□□□□□ -1.01
SNHG1-224ENST00000545688 PICK1Q9NRD5 415 aa8.74□□□□□ -1.01
SNHG1-224ENST00000545688 ADGRE2Q9UHX3 823 aa8.74□□□□□ -1.01
SNHG1-224ENST00000545688 U3KQE9 123 aa8.74□□□□□ -1.01
SNHG1-224ENST00000545688 TAL1P17542 331 aaPredicted RBP8.73□□□□□ -1.01
SNHG1-224ENST00000545688 FGD1P98174 961 aa8.73□□□□□ -1.01
SNHG1-224ENST00000545688 ZBTB37Q5TC79 503 aa8.73□□□□□ -1.01
SNHG1-224ENST00000545688 FLCNQ8NFG4 579 aa8.73□□□□□ -1.01
SNHG1-224ENST00000545688 GAL3ST3Q96A11 431 aa8.73□□□□□ -1.01
SNHG1-224ENST00000545688 FBXL18Q96ME1 805 aa8.73□□□□□ -1.01
SNHG1-224ENST00000545688 INPP5AQ14642 412 aa8.72□□□□□ -1.01
SNHG1-224ENST00000545688 CCDC85BQ15834 202 aaPredicted RBP8.72□□□□□ -1.01
SNHG1-224ENST00000545688 TTBK2Q6IQ55 1244 aa8.72□□□□□ -1.01
SNHG1-224ENST00000545688 TP53INP2Q8IXH6 220 aa8.72□□□□□ -1.01
SNHG1-224ENST00000545688 PLD6Q8N2A8 252 aaKnown RBP8.72□□□□□ -1.01
SNHG1-224ENST00000545688 ELMO3Q96BJ8 720 aa8.72□□□□□ -1.01
SNHG1-224ENST00000545688 FANCGO15287 622 aa8.71□□□□□ -1.02
SNHG1-224ENST00000545688 LRFN4Q6PJG9 635 aa8.71□□□□□ -1.02
SNHG1-224ENST00000545688 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.71□□□□□ -1.02
SNHG1-224ENST00000545688 PAK6Q9NQU5 681 aaPredicted RBP8.71□□□□□ -1.02
SNHG1-224ENST00000545688 PARP2Q9UGN5 583 aa8.71□□□□□ -1.02
SNHG1-224ENST00000545688 MEI1Q5TIA1 1274 aa8.7□□□□□ -1.02
SNHG1-224ENST00000545688 ZNF574Q6ZN55 896 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-224ENST00000545688 WFDC3Q8IUB2 231 aa8.7□□□□□ -1.02
SNHG1-224ENST00000545688 NETO1Q8TDF5 533 aa8.7□□□□□ -1.02
SNHG1-224ENST00000545688 BCL7CQ8WUZ0 217 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-224ENST00000545688 PLPPR2Q96GM1 343 aa8.7□□□□□ -1.02
SNHG1-224ENST00000545688 PRAMEF27A3QJZ7 478 aa8.69□□□□□ -1.02
SNHG1-224ENST00000545688 CDK8P49336 464 aa8.69□□□□□ -1.02
SNHG1-224ENST00000545688 KRTAP9-2Q9BYQ4 174 aa8.69□□□□□ -1.02
SNHG1-224ENST00000545688 SLC5A6Q9Y289 635 aa8.69□□□□□ -1.02
SNHG1-224ENST00000545688 DAB2P98082 770 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 BNIP3Q12983 259 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 PSMD2Q13200 908 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 MAP3K11Q16584 847 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 ARHGAP27Q6ZUM4 889 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 CDC37L1Q7L3B6 337 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 CYFIP1Q7L576 1253 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 SPRED2Q7Z698 418 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 FBXO33Q7Z6M2 555 aa8.68□□□□□ -1.02
SNHG1-224ENST00000545688 HEXIM2Q96MH2 286 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 289.8 ms