RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 TBC1D9BQ66K14 1250 aa11.21□□□□□ -0.61
DDX11-229ENST00000545668 TBC1D10CQ8IV04 446 aa11.21□□□□□ -0.61
DDX11-229ENST00000545668 GJB4Q9NTQ9 266 aa11.21□□□□□ -0.61
DDX11-229ENST00000545668 B4E1Z4 1266 aa11.21□□□□□ -0.62
DDX11-229ENST00000545668 ANTXR2P58335 489 aa11.21□□□□□ -0.62
DDX11-229ENST00000545668 CFAP100Q494V2 611 aa11.21□□□□□ -0.62
DDX11-229ENST00000545668 C3orf67Q6ZVT6 689 aa11.21□□□□□ -0.62
DDX11-229ENST00000545668 NBPF5PQ86XG9 351 aaPredicted RBP11.21□□□□□ -0.62
DDX11-229ENST00000545668 FBXL16Q8N461 479 aa11.21□□□□□ -0.62
DDX11-229ENST00000545668 IFNKQ9P0W0 207 aa11.21□□□□□ -0.62
DDX11-229ENST00000545668 ORC3Q9UBD5 711 aaPredicted RBP11.21□□□□□ -0.62
DDX11-229ENST00000545668 CCNL1Q9UK58 526 aaPredicted RBP11.21□□□□□ -0.62
DDX11-229ENST00000545668 BCL9LQ86UU0 1499 aa11.21□□□□□ -0.62
DDX11-229ENST00000545668 GYG1P46976 350 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 TDO2P48775 406 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 GTF2A1P52655 376 aaPredicted RBP11.2□□□□□ -0.62
DDX11-229ENST00000545668 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
DDX11-229ENST00000545668 IFNL3Q8IZI9 196 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 MIGA1Q8NAN2 632 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 NACAP1Q9BZK3 213 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 RAI14Q9P0K7 980 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
DDX11-229ENST00000545668 ZNF215Q9UL58 517 aaPredicted RBP11.2□□□□□ -0.62
DDX11-229ENST00000545668 DENND2AQ9ULE3 1009 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 RTL9Q8NET4 1388 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 USP27XA6NNY8 438 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 SMTNL1A8MU46 457 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 CAVIN4Q5BKX8 364 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 CALCOCO1Q9P1Z2 691 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 ANGEL1Q9UNK9 670 aaKnown RBP11.2□□□□□ -0.62
DDX11-229ENST00000545668 EVCP57679 992 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 CCDC24Q8N4L8 307 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 NLRP3Q96P20 1036 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 RSPH14Q9UHP6 348 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 RTCBQ9Y3I0 505 aaKnown RBP11.2□□□□□ -0.62
DDX11-229ENST00000545668 SLC4A4Q9Y6R1 1079 aa11.2□□□□□ -0.62
DDX11-229ENST00000545668 CARMIL3Q8ND23 1372 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 CNTNAP4Q9C0A0 1308 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 SLC3A2P08195 630 aaKnown RBP11.19□□□□□ -0.62
DDX11-229ENST00000545668 SF3B3Q15393 1217 aaKnown RBP11.19□□□□□ -0.62
DDX11-229ENST00000545668 ELF2Q15723 593 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 SYT10Q6XYQ8 523 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 FNBP4Q8N3X1 1017 aaPredicted RBP11.19□□□□□ -0.62
DDX11-229ENST00000545668 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 SPTLC3Q9NUV7 552 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 PAXBP1Q9Y5B6 917 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 AKAP11Q9UKA4 1901 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 NWD2Q9ULI1 1742 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 RPS6KA4O75676 772 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 URI1O94763 535 aaPredicted RBP11.19□□□□□ -0.62
DDX11-229ENST00000545668 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 SNW1Q13573 536 aaKnown RBP11.19□□□□□ -0.62
DDX11-229ENST00000545668 FUCA2Q9BTY2 467 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 NYXQ9GZU5 481 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 BSDC1Q9NW68 430 aaPredicted RBP11.19□□□□□ -0.62
DDX11-229ENST00000545668 NARFQ9UHQ1 456 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 ATRNO75882 1429 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 PRKAB2O43741 272 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 CYP7A1P22680 504 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 TRIM29Q14134 588 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 CYB5R4Q7L1T6 521 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 MRPS27Q92552 414 aaKnown RBP11.19□□□□□ -0.62
DDX11-229ENST00000545668 INCENPQ9NQS7 918 aa11.19□□□□□ -0.62
DDX11-229ENST00000545668 SALL1Q9NSC2 1324 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 WTIPA6NIX2 430 aaPredicted RBP11.18□□□□□ -0.62
DDX11-229ENST00000545668 FDPSP14324 419 aaKnown RBP11.18□□□□□ -0.62
DDX11-229ENST00000545668 METAP2P50579 478 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDX11-229ENST00000545668 TPTE2Q6XPS3 522 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 MICU3Q86XE3 530 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 LCORLQ8N3X6 602 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 CELF1Q92879 486 aaKnown RBP11.18□□□□□ -0.62
DDX11-229ENST00000545668 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 GNAT2P19087 354 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 UBE4AQ14139 1066 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 CPLX2Q6PUV4 134 aaKnown RBP11.18□□□□□ -0.62
DDX11-229ENST00000545668 MFSD6Q6ZSS7 791 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 LRRC8AQ8IWT6 810 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 SRRTQ9BXP5 876 aaKnown RBP11.18□□□□□ -0.62
DDX11-229ENST00000545668 MINPP1Q9UNW1 487 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 LAMA4Q16363 1823 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 WDR19Q8NEZ3 1342 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 CTAGE5O15320 804 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 ALX1Q15699 326 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 TMEM67Q5HYA8 995 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 ZSWIM4Q9H7M6 989 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 EPB41L4AQ9HCS5 686 aaPredicted RBP11.18□□□□□ -0.62
DDX11-229ENST00000545668 DNAI1Q9UI46 699 aa11.18□□□□□ -0.62
DDX11-229ENST00000545668 NEDD4P46934 1319 aa11.17□□□□□ -0.62
DDX11-229ENST00000545668 GSG1L2A8MUP6 293 aa11.17□□□□□ -0.62
DDX11-229ENST00000545668 IFIT3O14879 490 aaKnown RBP11.17□□□□□ -0.62
DDX11-229ENST00000545668 RPS8P62241 208 aaKnown RBP11.17□□□□□ -0.62
DDX11-229ENST00000545668 NCBP1Q09161 790 aaKnown RBP11.17□□□□□ -0.62
DDX11-229ENST00000545668 RC3H1Q5TC82 1133 aaKnown RBP11.17□□□□□ -0.62
DDX11-229ENST00000545668 ADD1P35611 737 aaKnown RBP11.17□□□□□ -0.62
DDX11-229ENST00000545668 FAM160A1Q05DH4 1040 aa11.17□□□□□ -0.62
DDX11-229ENST00000545668 TMEM87BQ96K49 555 aa11.17□□□□□ -0.62
DDX11-229ENST00000545668 PES1O00541 588 aaKnown RBP11.17□□□□□ -0.62
DDX11-229ENST00000545668 SH2B2O14492 632 aaPredicted RBP11.17□□□□□ -0.62
DDX11-229ENST00000545668 SPECC1Q5M775 1068 aa11.17□□□□□ -0.62
DDX11-229ENST00000545668 TEX35Q5T0J7 233 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms