RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 INCENPQ9NQS7 918 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 ANAPC4Q9UJX5 808 aa20.55■□□□□ 0.88
SCARB1-208ENST00000544327 A0A0G2JS52 829 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 RXRAP19793 462 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 SSRP1Q08945 709 aaKnown RBP20.54■□□□□ 0.88
SCARB1-208ENST00000544327 SART3Q15020 963 aaKnown RBP20.54■□□□□ 0.88
SCARB1-208ENST00000544327 PTPAQ15257 358 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 DNTTIP2Q5QJE6 756 aaKnown RBP20.54■□□□□ 0.88
SCARB1-208ENST00000544327 ANKRD18AQ8IVF6 992 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 JMYQ8N9B5 988 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 PHKBQ93100 1093 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 MAP3K14Q99558 947 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 GNL3LQ9NVN8 582 aaKnown RBP20.54■□□□□ 0.88
SCARB1-208ENST00000544327 BSDC1Q9NW68 430 aaPredicted RBP20.54■□□□□ 0.88
SCARB1-208ENST00000544327 LRP2BPQ9P2M1 347 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 CLIP2Q9UDT6 1046 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 CNTNAP4Q9C0A0 1308 aa20.54■□□□□ 0.88
SCARB1-208ENST00000544327 BECN2A8MW95 431 aa20.53■□□□□ 0.88
SCARB1-208ENST00000544327 ZNF202O95125 648 aa20.53■□□□□ 0.88
SCARB1-208ENST00000544327 RBM6P78332 1123 aaKnown RBP20.53■□□□□ 0.88
SCARB1-208ENST00000544327 TRIM29Q14134 588 aa20.53■□□□□ 0.88
SCARB1-208ENST00000544327 SLC10A5Q5PT55 438 aa20.53■□□□□ 0.88
SCARB1-208ENST00000544327 DRC7Q8IY82 874 aa20.53■□□□□ 0.88
SCARB1-208ENST00000544327 HPSEQ9Y251 543 aa20.53■□□□□ 0.88
SCARB1-208ENST00000544327 CACNA1SQ13698 1873 aa20.53■□□□□ 0.88
SCARB1-208ENST00000544327 WDHD1O75717 1129 aaPredicted RBP20.53■□□□□ 0.88
SCARB1-208ENST00000544327 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.53■□□□□ 0.88
SCARB1-208ENST00000544327 COL1A1P02452 1464 aaPredicted RBP20.52■□□□□ 0.88
SCARB1-208ENST00000544327 PFKFB1P16118 471 aa20.52■□□□□ 0.88
SCARB1-208ENST00000544327 ERFEQ4G0M1 354 aa20.52■□□□□ 0.88
SCARB1-208ENST00000544327 LINC00116Q8NCU8 138 aa20.52■□□□□ 0.88
SCARB1-208ENST00000544327 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.52■□□□□ 0.88
SCARB1-208ENST00000544327 COL24A1Q17RW2 1714 aa20.52■□□□□ 0.87
SCARB1-208ENST00000544327 NEMFO60524 1076 aa20.51■□□□□ 0.87
SCARB1-208ENST00000544327 CYP7A1P22680 504 aa20.51■□□□□ 0.87
SCARB1-208ENST00000544327 GTF2F1P35269 517 aaKnown RBP eCLIP20.51■□□□□ 0.876e-7■■■■□ 21.5
SCARB1-208ENST00000544327 PPARAQ07869 468 aa20.51■□□□□ 0.87
SCARB1-208ENST00000544327 WTAPQ15007 396 aa20.51■□□□□ 0.87
SCARB1-208ENST00000544327 NRBP1Q9UHY1 535 aa20.51■□□□□ 0.87
SCARB1-208ENST00000544327 MROH7-TTC4A0A0A0MT08 1334 aa20.51■□□□□ 0.87
SCARB1-208ENST00000544327 KCNQ2O43526 872 aa20.5■□□□□ 0.87
SCARB1-208ENST00000544327 SLC3A2P08195 630 aaKnown RBP20.5■□□□□ 0.87
SCARB1-208ENST00000544327 NLRP12P59046 1061 aa20.5■□□□□ 0.87
SCARB1-208ENST00000544327 HSP90AA2PQ14568 343 aaPredicted RBP20.5■□□□□ 0.87
SCARB1-208ENST00000544327 RTN1Q16799 776 aa20.5■□□□□ 0.87
SCARB1-208ENST00000544327 CCDC144CPQ8IYA2 1237 aa20.5■□□□□ 0.87
SCARB1-208ENST00000544327 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
SCARB1-208ENST00000544327 SLC26A6Q9BXS9 759 aa20.5■□□□□ 0.87
SCARB1-208ENST00000544327 MAGEB6P1A0A0J9YX57 407 aa20.5■□□□□ 0.87
SCARB1-208ENST00000544327 CCDC196A0A1B0GTZ2 297 aa20.5■□□□□ 0.87
SCARB1-208ENST00000544327 PDS5AQ29RF7 1337 aaKnown RBP20.5■□□□□ 0.87
SCARB1-208ENST00000544327 ERICH2A1L162 156 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 SEMA3EO15041 775 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 ZBTB22O15209 634 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 CUTAO60888 179 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 GNL2Q13823 731 aaKnown RBP20.49■□□□□ 0.87
SCARB1-208ENST00000544327 PPP2R5BQ15173 497 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 CCDC144BQ3MJ40 725 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 C3orf67Q6ZVT6 689 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 ADGRA1Q86SQ6 560 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 NBPF11Q86T75 865 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 AOPEPQ8N6M6 819 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 MIGA1Q8NAN2 632 aa20.49■□□□□ 0.87
SCARB1-208ENST00000544327 RIOK1Q9BRS2 568 aaKnown RBP20.49■□□□□ 0.87
SCARB1-208ENST00000544327 DUOX1Q9NRD9 1551 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 RESP18Q5W5W9 173 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 ELOA2Q8IYF1 753 aaPredicted RBP20.48■□□□□ 0.87
SCARB1-208ENST00000544327 TRIM22Q8IYM9 498 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 MINPP1Q9UNW1 487 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 DLEC1Q9Y238 1755 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 MMP1P03956 469 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 PCP11498 1178 aaKnown RBP20.48■□□□□ 0.87
SCARB1-208ENST00000544327 MARCKSP29966 332 aaPredicted RBP20.48■□□□□ 0.87
SCARB1-208ENST00000544327 SYKP43405 635 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 ZRSR1Q15695 479 aaKnown RBP20.48■□□□□ 0.87
SCARB1-208ENST00000544327 RC3H1Q5TC82 1133 aaKnown RBP20.48■□□□□ 0.87
SCARB1-208ENST00000544327 SHC4Q6S5L8 630 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 NOSTRINQ8IVI9 506 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 CACTINQ8WUQ7 758 aaKnown RBP20.48■□□□□ 0.87
SCARB1-208ENST00000544327 MAP7D2Q96T17 732 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 BRIP1Q9BX63 1249 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 FOXP1Q9H334 677 aaPredicted RBP20.48■□□□□ 0.87
SCARB1-208ENST00000544327 TUBE1Q9UJT0 475 aa20.48■□□□□ 0.87
SCARB1-208ENST00000544327 DEXIO95424 95 aa20.47■□□□□ 0.87
SCARB1-208ENST00000544327 GYG1P46976 350 aa20.47■□□□□ 0.87
SCARB1-208ENST00000544327 LRMPQ12912 555 aa20.47■□□□□ 0.87
SCARB1-208ENST00000544327 SEC23AQ15436 765 aa20.47■□□□□ 0.87
SCARB1-208ENST00000544327 DPCR1Q3MIW9 517 aa20.47■□□□□ 0.87
SCARB1-208ENST00000544327 CAVIN4Q5BKX8 364 aa20.47■□□□□ 0.87
SCARB1-208ENST00000544327 RRP12Q5JTH9 1297 aaKnown RBP20.47■□□□□ 0.87
SCARB1-208ENST00000544327 CRACR2BQ8N4Y2 399 aaPredicted RBP20.47■□□□□ 0.87
SCARB1-208ENST00000544327 ERCC4Q92889 916 aaPredicted RBP20.47■□□□□ 0.87
SCARB1-208ENST00000544327 A0A087WWV3 80 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 FGRP09769 529 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 SAFBQ15424 915 aaKnown RBP eCLIP20.46■□□□□ 0.87
SCARB1-208ENST00000544327 FBXO33Q7Z6M2 555 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 ZNF654Q8IZM8 581 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 ESR2Q92731 530 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 RAI14Q9P0K7 980 aa20.46■□□□□ 0.87
SCARB1-208ENST00000544327 TAF1P21675 1872 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms