RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TBC1D5Q92609 795 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 DHX58Q96C10 678 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 KDRP35968 1356 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 MYCLP12524 364 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 TNNT1P13805 278 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 RBM6P78332 1123 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 SPAG1Q07617 926 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 PABPC4Q13310 644 aaKnown RBP eCLIP7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 TAX1BP1Q86VP1 789 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 CXorf38Q8TB03 319 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 CGNQ9P2M7 1197 aaKnown RBP7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 XDHP47989 1333 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 PRR36Q9H6K5 1346 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 DKC1O60832 514 aaKnown RBP eCLIP7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 BRAPQ7Z569 592 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 HOMER2Q9NSB8 354 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 ARPP21Q9UBL0 812 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 GABBR1Q9UBS5 961 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 GSTTP1A0A1W2PQM5 241 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 SCNN1DP51172 638 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 CHRNDQ07001 517 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 CC2D1AQ6P1N0 951 aaPredicted RBP7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 SPC25Q9HBM1 224 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 CLIP2Q9UDT6 1046 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 GINS2Q9Y248 185 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 KIF24Q5T7B8 1368 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 PREX2Q70Z35 1606 aa7.8□□□□□ -1.16
SRGAP1-206ENST00000543397 BBOX1O75936 387 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 DEXIO95424 95 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 NOP2P46087 812 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 HOOK3Q86VS8 718 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 RIPOR2Q9Y4F9 1068 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 ZNF804BA4D1E1 1349 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 ERCC6L2Q5T890 1561 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 TCP10L2B9ZVM9 353 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 KIF2AO00139 706 aaPredicted RBP7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 AKR1B10O60218 316 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 PAFAH1B1P43034 410 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 MYOM2P54296 1465 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 TFAP4Q01664 338 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 AOX1Q06278 1338 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 LUZP1Q86V48 1076 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 CHURC1Q8WUH1 139 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 KDM5AP29375 1690 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 CCDC85CA6NKD9 419 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 KIF4BQ2VIQ3 1234 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 CERKQ8TCT0 537 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 PAGR1Q9BTK6 254 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 GTPBP4Q9BZE4 634 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 KDM4CQ9H3R0 1056 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 NDUFB9Q9Y6M9 179 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 GCC2Q8IWJ2 1684 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 MAP3K4Q9Y6R4 1608 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 ARAP3Q8WWN8 1544 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 PALLDQ8WX93 1383 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 EZRP15311 586 aaKnown RBP7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 ACTN2P35609 894 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 FOXD4Q12950 439 aaPredicted RBP7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 UBE4AQ14139 1066 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 OTUD7BQ6GQQ9 843 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 ALS2CR12Q96Q35 445 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 AZI2Q9H6S1 392 aa7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 V9GY48 417 aaPredicted RBP7.79□□□□□ -1.16
SRGAP1-206ENST00000543397 CHMP2AO43633 222 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 CFBP00751 764 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 CCDC93Q567U6 631 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 RINLQ6ZS11 566 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 LEMD3Q9Y2U8 911 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 ABCC3O15438 1527 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 ADGRL3Q9HAR2 1447 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 ATP5JP18859 108 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 SLMAPQ14BN4 828 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 DALRD3Q5D0E6 543 aaKnown RBP7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 HAUS3Q68CZ6 603 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 IQUBQ8NA54 791 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 FAM227BQ96M60 508 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 USP17L12C9JPN9 530 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 USP17L21D6R901 530 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 F13A1P00488 732 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 MMP10P09238 476 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 BCAMP50895 628 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 PPP2R5BQ15173 497 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 USH1GQ495M9 461 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 LCA5Q86VQ0 697 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 LZTS2Q9BRK4 669 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 USP44Q9H0E7 712 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 GREM2Q9H772 168 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 KIFC2Q96AC6 838 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 CTAGE1Q96RT6 745 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 A2ML1A8K2U0 1454 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 SPATA31E1Q6ZUB1 1445 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 GSDMDP57764 484 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 CTDSPL2Q05D32 466 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 ARHGEF6Q15052 776 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 RILPL1Q5EBL4 403 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 TMC6Q7Z403 805 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 OTUD7AQ8TE49 926 aaPredicted RBP7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 PIGBQ92521 554 aa7.78□□□□□ -1.16
SRGAP1-206ENST00000543397 EIF3JO75822 258 aaKnown RBP7.77□□□□□ -1.17
SRGAP1-206ENST00000543397 ADCY7P51828 1080 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms